Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.45□□□□□ -1.86
SHANK2Q9UPX8 MIR4506-201ENST00000584693 77 ntBASIC3.45□□□□□ -1.86
SHANK2Q9UPX8 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SHANK2Q9UPX8 MIR6733-201ENST00000635723 61 ntBASIC3.45□□□□□ -1.86
SHANK2Q9UPX8 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SHANK2Q9UPX8 WWP1P1-201ENST00000466609 2769 ntBASIC3.45□□□□□ -1.86
SHANK2Q9UPX8 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC3.45□□□□□ -1.86
SHANK2Q9UPX8 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SHANK2Q9UPX8 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
SHANK2Q9UPX8 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
SHANK2Q9UPX8 BX005019.1-201ENST00000561881 1810 ntBASIC3.44□□□□□ -1.86
SHANK2Q9UPX8 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC3.44□□□□□ -1.86
SHANK2Q9UPX8 U8.13-201ENST00000390842 128 ntBASIC3.44□□□□□ -1.86
SHANK2Q9UPX8 RNA5SP213-201ENST00000391031 106 ntBASIC3.44□□□□□ -1.86
SHANK2Q9UPX8 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC3.44□□□□□ -1.86
SHANK2Q9UPX8 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC3.44□□□□□ -1.86
SHANK2Q9UPX8 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.44□□□□□ -1.86
SHANK2Q9UPX8 Z98742.2-201ENST00000431564 187 ntBASIC3.44□□□□□ -1.86
SHANK2Q9UPX8 MUPP-201ENST00000438111 566 ntBASIC3.44□□□□□ -1.86
SHANK2Q9UPX8 RPL23AP62-201ENST00000463396 453 ntBASIC3.44□□□□□ -1.86
SHANK2Q9UPX8 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC3.44□□□□□ -1.86
SHANK2Q9UPX8 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.44□□□□□ -1.86
SHANK2Q9UPX8 Z99496.1-201ENST00000469424 1477 ntBASIC3.44□□□□□ -1.86
SHANK2Q9UPX8 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC3.43□□□□□ -1.86
SHANK2Q9UPX8 OR5AQ1P-202ENST00000641257 1534 ntBASIC3.43□□□□□ -1.86
SHANK2Q9UPX8 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
SHANK2Q9UPX8 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SHANK2Q9UPX8 XIAPP3-201ENST00000312918 795 ntBASIC3.43□□□□□ -1.86
SHANK2Q9UPX8 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.43□□□□□ -1.86
SHANK2Q9UPX8 Y_RNA.540-201ENST00000384638 111 ntBASIC3.43□□□□□ -1.86
SHANK2Q9UPX8 RN7SKP123-201ENST00000410732 291 ntBASIC3.43□□□□□ -1.86
SHANK2Q9UPX8 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.43□□□□□ -1.86
SHANK2Q9UPX8 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.43□□□□□ -1.86
SHANK2Q9UPX8 MTCO3P11-201ENST00000455103 774 ntBASIC3.43□□□□□ -1.86
SHANK2Q9UPX8 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.43□□□□□ -1.86
SHANK2Q9UPX8 AC112673.1-201ENST00000513168 575 ntBASIC3.43□□□□□ -1.86
SHANK2Q9UPX8 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.43□□□□□ -1.86
SHANK2Q9UPX8 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.43□□□□□ -1.86
SHANK2Q9UPX8 MTCO3P13-201ENST00000577757 781 ntBASIC3.43□□□□□ -1.86
SHANK2Q9UPX8 MIR6873-201ENST00000622788 63 ntBASIC3.43□□□□□ -1.86
SHANK2Q9UPX8 AC084035.1-201ENST00000634543 607 ntBASIC3.43□□□□□ -1.86
SHANK2Q9UPX8 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.43□□□□□ -1.86
SHANK2Q9UPX8 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
SHANK2Q9UPX8 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.43□□□□□ -1.86
SHANK2Q9UPX8 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SHANK2Q9UPX8 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
SHANK2Q9UPX8 FRG1BP-201ENST00000278882 761 ntBASIC3.42□□□□□ -1.86
SHANK2Q9UPX8 RNU1-91P-201ENST00000364746 163 ntBASIC3.42□□□□□ -1.86
SHANK2Q9UPX8 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.42□□□□□ -1.86
SHANK2Q9UPX8 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.42□□□□□ -1.86
SHANK2Q9UPX8 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.42□□□□□ -1.86
SHANK2Q9UPX8 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3.42□□□□□ -1.86
SHANK2Q9UPX8 AC105137.2-201ENST00000569073 466 ntBASIC3.42□□□□□ -1.86
SHANK2Q9UPX8 ISCA1P3-201ENST00000577104 373 ntBASIC3.42□□□□□ -1.86
SHANK2Q9UPX8 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.42□□□□□ -1.86
SHANK2Q9UPX8 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.42□□□□□ -1.86
SHANK2Q9UPX8 MIR8070-201ENST00000616510 88 ntBASIC3.42□□□□□ -1.86
SHANK2Q9UPX8 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SHANK2Q9UPX8 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SHANK2Q9UPX8 RNU1-17P-201ENST00000363022 152 ntBASIC3.41□□□□□ -1.86
SHANK2Q9UPX8 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SHANK2Q9UPX8 AC010881.1-201ENST00000433830 235 ntBASIC3.41□□□□□ -1.86
SHANK2Q9UPX8 AL138787.1-202ENST00000437804 898 ntBASIC3.41□□□□□ -1.86
SHANK2Q9UPX8 AC007677.1-201ENST00000445757 515 ntBASIC3.41□□□□□ -1.86
SHANK2Q9UPX8 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC3.41□□□□□ -1.86
SHANK2Q9UPX8 AC026412.2-201ENST00000512270 1075 ntBASIC3.41□□□□□ -1.86
SHANK2Q9UPX8 MTCYBP20-201ENST00000524239 1129 ntBASIC3.41□□□□□ -1.86
SHANK2Q9UPX8 TRAV11-201ENST00000539512 339 ntBASIC3.41□□□□□ -1.86
SHANK2Q9UPX8 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.41□□□□□ -1.86
SHANK2Q9UPX8 OR4U1P-201ENST00000554958 912 ntBASIC3.41□□□□□ -1.86
SHANK2Q9UPX8 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SHANK2Q9UPX8 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SHANK2Q9UPX8 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.41□□□□□ -1.86
SHANK2Q9UPX8 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.41□□□□□ -1.86
SHANK2Q9UPX8 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
SHANK2Q9UPX8 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SHANK2Q9UPX8 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.41□□□□□ -1.86
SHANK2Q9UPX8 AL390023.1-201ENST00000428836 262 ntBASIC3.41□□□□□ -1.86
SHANK2Q9UPX8 AC092427.1-202ENST00000430569 476 ntBASIC3.41□□□□□ -1.86
SHANK2Q9UPX8 RPL36AP6-201ENST00000435770 321 ntBASIC3.41□□□□□ -1.86
SHANK2Q9UPX8 USP9YP7-201ENST00000436723 430 ntBASIC3.41□□□□□ -1.86
SHANK2Q9UPX8 USP9YP32-201ENST00000452432 430 ntBASIC3.41□□□□□ -1.86
SHANK2Q9UPX8 AC135999.1-201ENST00000478962 479 ntBASIC3.41□□□□□ -1.86
SHANK2Q9UPX8 RPS27P27-201ENST00000498779 255 ntBASIC3.41□□□□□ -1.86
SHANK2Q9UPX8 AC104090.1-201ENST00000506341 1171 ntBASIC3.41□□□□□ -1.86
SHANK2Q9UPX8 RNU6-295P-201ENST00000516901 104 ntBASIC3.41□□□□□ -1.86
SHANK2Q9UPX8 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
SHANK2Q9UPX8 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.41□□□□□ -1.86
SHANK2Q9UPX8 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.41□□□□□ -1.86
SHANK2Q9UPX8 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.41□□□□□ -1.86
SHANK2Q9UPX8 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SHANK2Q9UPX8 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SHANK2Q9UPX8 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC3.4□□□□□ -1.87
SHANK2Q9UPX8 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.4□□□□□ -1.87
SHANK2Q9UPX8 RPS15AP28-201ENST00000435088 386 ntBASIC3.4□□□□□ -1.87
SHANK2Q9UPX8 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.4□□□□□ -1.87
SHANK2Q9UPX8 HIGD1AP10-201ENST00000527837 282 ntBASIC3.4□□□□□ -1.87
SHANK2Q9UPX8 AL645944.1-201ENST00000603857 493 ntBASIC3.4□□□□□ -1.87
SHANK2Q9UPX8 AC017076.1-201ENST00000607613 578 ntBASIC3.4□□□□□ -1.87
SHANK2Q9UPX8 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms