Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 LSM3P2-201ENST00000551246 273 ntBASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 AL157687.1-201ENST00000554853 619 ntBASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 AL355375.2-201ENST00000574825 175 ntBASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 MIR4472-2-201ENST00000582069 67 ntBASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 AC124303.1-201ENST00000605703 360 ntBASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 AC004908.2-201ENST00000609090 574 ntBASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 AC023158.2-201ENST00000614876 543 ntBASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 AP001506.1-201ENST00000615444 211 ntBASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 SCARNA15.3-201ENST00000626315 122 ntBASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 SCARNA4.1-201ENST00000628597 123 ntBASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 AL133243.3-201ENST00000617415 3004 ntBASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 AC016588.2-201ENST00000632484 3021 ntBASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 RNA5SP307-201ENST00000362863 116 ntBASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 SNORA73.2-201ENST00000364946 201 ntBASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 RNA5SP151-201ENST00000365632 117 ntBASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 RNU6-213P-201ENST00000384051 104 ntBASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 AP000357.1-201ENST00000409926 1165 ntBASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 HMGN2P27-201ENST00000427352 270 ntBASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 RPL7P2-201ENST00000427639 268 ntBASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 PPIAP13-201ENST00000434706 478 ntBASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 AC244505.5-201ENST00000443639 207 ntBASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 GAPDHP17-201ENST00000449858 1001 ntBASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 AL590639.1-201ENST00000456484 337 ntBASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 AC108078.1-201ENST00000508073 725 ntBASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 RNU6-123P-201ENST00000516163 102 ntBASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 RNU6-277P-201ENST00000516272 106 ntBASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 AC026403.1-201ENST00000518938 295 ntBASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 AC007424.1-203ENST00000554613 687 ntBASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 AC007151.1-201ENST00000572774 483 ntBASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 MIR3171-201ENST00000584270 74 ntBASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 AC008737.2-201ENST00000599446 118 ntBASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 AC243960.4-201ENST00000600532 288 ntBASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 AL161729.4-201ENST00000604650 476 ntBASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 AC019176.2-201ENST00000611579 315 ntBASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 VPS35P1-201ENST00000563400 1518 ntBASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 CASC19-204ENST00000641001 2055 ntBASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 MTND5P16-201ENST00000460269 1703 ntBASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 Y_RNA.145-201ENST00000363527 102 ntBASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 RNA5SP513-201ENST00000364648 118 ntBASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 RNU1-44P-201ENST00000384453 163 ntBASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 AC007066.1-201ENST00000392902 381 ntBASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 AC104297.1-201ENST00000393779 870 ntBASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 AL356776.1-201ENST00000406574 447 ntBASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 HMGB3P23-201ENST00000414981 585 ntBASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 HMGB3P20-201ENST00000417997 600 ntBASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 MTCO2P12-201ENST00000427426 682 ntBASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 AC073464.1-201ENST00000429823 534 ntBASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 COX6B1P7-201ENST00000430845 235 ntBASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 AC087312.1-201ENST00000471411 480 ntBASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 AC022447.3-201ENST00000506865 495 ntBASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 AC078814.3-201ENST00000553036 491 ntBASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 AL359212.1-201ENST00000556608 614 ntBASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 AC060780.3-201ENST00000589464 80 ntBASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 AL132822.1-201ENST00000617063 513 ntBASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 AL445264.1-201ENST00000621719 171 ntBASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 RMST_7.1-201ENST00000621935 268 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms