Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.93□□□□□ -1.78
SIX4Q9UIU6 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.93□□□□□ -1.78
SIX4Q9UIU6 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.93□□□□□ -1.78
SIX4Q9UIU6 RPL36P19-201ENST00000430744 301 ntBASIC3.93□□□□□ -1.78
SIX4Q9UIU6 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.93□□□□□ -1.78
SIX4Q9UIU6 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.93□□□□□ -1.78
SIX4Q9UIU6 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.93□□□□□ -1.78
SIX4Q9UIU6 AC239367.2-201ENST00000447309 705 ntBASIC3.93□□□□□ -1.78
SIX4Q9UIU6 TRGVB-201ENST00000453257 471 ntBASIC3.93□□□□□ -1.78
SIX4Q9UIU6 KATNBL1P6-201ENST00000453433 915 ntBASIC3.93□□□□□ -1.78
SIX4Q9UIU6 MTCO3P11-201ENST00000455103 774 ntBASIC3.93□□□□□ -1.78
SIX4Q9UIU6 AC109486.1-201ENST00000486833 374 ntBASIC3.93□□□□□ -1.78
SIX4Q9UIU6 AC010424.1-201ENST00000506336 297 ntBASIC3.93□□□□□ -1.78
SIX4Q9UIU6 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.93□□□□□ -1.78
SIX4Q9UIU6 AC104619.4-201ENST00000510773 249 ntBASIC3.93□□□□□ -1.78
SIX4Q9UIU6 MTCYBP43-201ENST00000513621 740 ntBASIC3.93□□□□□ -1.78
SIX4Q9UIU6 Y_RNA.695-201ENST00000516715 107 ntBASIC3.93□□□□□ -1.78
SIX4Q9UIU6 PAICSP4-201ENST00000517543 1253 ntBASIC3.93□□□□□ -1.78
SIX4Q9UIU6 AC026403.1-201ENST00000518938 295 ntBASIC3.93□□□□□ -1.78
SIX4Q9UIU6 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.93□□□□□ -1.78
SIX4Q9UIU6 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SIX4Q9UIU6 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.93□□□□□ -1.78
SIX4Q9UIU6 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
SIX4Q9UIU6 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.93□□□□□ -1.78
SIX4Q9UIU6 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.93□□□□□ -1.78
SIX4Q9UIU6 AC090502.2-201ENST00000549267 280 ntBASIC3.93□□□□□ -1.78
SIX4Q9UIU6 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.93□□□□□ -1.78
SIX4Q9UIU6 AL360157.1-201ENST00000565962 87 ntBASIC3.93□□□□□ -1.78
SIX4Q9UIU6 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.93□□□□□ -1.78
SIX4Q9UIU6 NF1P5-201ENST00000588287 448 ntBASIC3.93□□□□□ -1.78
SIX4Q9UIU6 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.93□□□□□ -1.78
SIX4Q9UIU6 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.93□□□□□ -1.78
SIX4Q9UIU6 VN1R92P-201ENST00000598511 928 ntBASIC3.93□□□□□ -1.78
SIX4Q9UIU6 U73023.1-201ENST00000603134 700 ntBASIC3.93□□□□□ -1.78
SIX4Q9UIU6 AC115621.1-201ENST00000604653 858 ntBASIC3.93□□□□□ -1.78
SIX4Q9UIU6 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.93□□□□□ -1.78
SIX4Q9UIU6 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.93□□□□□ -1.78
SIX4Q9UIU6 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.93□□□□□ -1.78
SIX4Q9UIU6 AL356266.1-201ENST00000623311 483 ntBASIC3.93□□□□□ -1.78
SIX4Q9UIU6 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.93□□□□□ -1.78
SIX4Q9UIU6 AC127502.3-201ENST00000636170 1206 ntBASIC3.93□□□□□ -1.78
SIX4Q9UIU6 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.93□□□□□ -1.78
SIX4Q9UIU6 AC008725.1-201ENST00000605123 2263 ntBASIC3.93□□□□□ -1.78
SIX4Q9UIU6 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
SIX4Q9UIU6 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SIX4Q9UIU6 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SIX4Q9UIU6 AC007529.1-201ENST00000418574 2178 ntBASIC3.92□□□□□ -1.78
SIX4Q9UIU6 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SIX4Q9UIU6 XIAPP3-201ENST00000312918 795 ntBASIC3.92□□□□□ -1.78
SIX4Q9UIU6 RPL21P132-201ENST00000331267 462 ntBASIC3.92□□□□□ -1.78
SIX4Q9UIU6 SNORD9-201ENST00000362566 104 ntBASIC3.92□□□□□ -1.78
SIX4Q9UIU6 RNU4-21P-201ENST00000362802 126 ntBASIC3.92□□□□□ -1.78
SIX4Q9UIU6 RNU4-75P-201ENST00000364621 146 ntBASIC3.92□□□□□ -1.78
SIX4Q9UIU6 RNU6-921P-201ENST00000384361 107 ntBASIC3.92□□□□□ -1.78
SIX4Q9UIU6 MIR506-201ENST00000384998 124 ntBASIC3.92□□□□□ -1.78
SIX4Q9UIU6 RPS15AP38-201ENST00000413110 372 ntBASIC3.92□□□□□ -1.78
SIX4Q9UIU6 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC3.92□□□□□ -1.78
SIX4Q9UIU6 MED14P1-201ENST00000430517 648 ntBASIC3.92□□□□□ -1.78
SIX4Q9UIU6 AL353706.1-201ENST00000436728 494 ntBASIC3.92□□□□□ -1.78
SIX4Q9UIU6 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.92□□□□□ -1.78
SIX4Q9UIU6 RPS3AP46-201ENST00000448352 682 ntBASIC3.92□□□□□ -1.78
SIX4Q9UIU6 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.92□□□□□ -1.78
SIX4Q9UIU6 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.92□□□□□ -1.78
SIX4Q9UIU6 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.92□□□□□ -1.78
SIX4Q9UIU6 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.92□□□□□ -1.78
SIX4Q9UIU6 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.92□□□□□ -1.78
SIX4Q9UIU6 MTCO3P7-201ENST00000510008 774 ntBASIC3.92□□□□□ -1.78
SIX4Q9UIU6 RNU6-583P-201ENST00000516012 92 ntBASIC3.92□□□□□ -1.78
SIX4Q9UIU6 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.92□□□□□ -1.78
SIX4Q9UIU6 RANP9-201ENST00000519957 271 ntBASIC3.92□□□□□ -1.78
SIX4Q9UIU6 ARL2BPP5-201ENST00000523141 481 ntBASIC3.92□□□□□ -1.78
SIX4Q9UIU6 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.92□□□□□ -1.78
SIX4Q9UIU6 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.92□□□□□ -1.78
SIX4Q9UIU6 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.92□□□□□ -1.78
SIX4Q9UIU6 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.92□□□□□ -1.78
SIX4Q9UIU6 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.92□□□□□ -1.78
SIX4Q9UIU6 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.92□□□□□ -1.78
SIX4Q9UIU6 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.92□□□□□ -1.78
SIX4Q9UIU6 AC074051.3-201ENST00000570238 358 ntBASIC3.92□□□□□ -1.78
SIX4Q9UIU6 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.92□□□□□ -1.78
SIX4Q9UIU6 AC119751.7-201ENST00000600494 245 ntBASIC3.92□□□□□ -1.78
SIX4Q9UIU6 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SIX4Q9UIU6 AC068790.2-201ENST00000602601 557 ntBASIC3.92□□□□□ -1.78
SIX4Q9UIU6 AC025165.5-201ENST00000602802 578 ntBASIC3.92□□□□□ -1.78
SIX4Q9UIU6 MTCYBP22-201ENST00000603788 447 ntBASIC3.92□□□□□ -1.78
SIX4Q9UIU6 AL031775.1-201ENST00000607014 887 ntBASIC3.92□□□□□ -1.78
SIX4Q9UIU6 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.92□□□□□ -1.78
SIX4Q9UIU6 MIR486-1-201ENST00000612171 68 ntBASIC3.92□□□□□ -1.78
SIX4Q9UIU6 AC078899.5-201ENST00000612475 178 ntBASIC3.92□□□□□ -1.78
SIX4Q9UIU6 AL034408.1-202ENST00000636088 415 ntBASIC3.92□□□□□ -1.78
SIX4Q9UIU6 AC092104.1-201ENST00000497346 1441 ntBASIC3.92□□□□□ -1.78
SIX4Q9UIU6 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SIX4Q9UIU6 MTCO1P14-201ENST00000441695 1559 ntBASIC3.92□□□□□ -1.78
SIX4Q9UIU6 SAGE2P-201ENST00000420011 2126 ntBASIC3.92□□□□□ -1.78
SIX4Q9UIU6 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SIX4Q9UIU6 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SIX4Q9UIU6 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SIX4Q9UIU6 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SIX4Q9UIU6 RNU6-433P-201ENST00000363216 104 ntBASIC3.91□□□□□ -1.78
SIX4Q9UIU6 Y_RNA.194-201ENST00000363985 102 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms