Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC3.89□□□□□ -1.79
NPC1L1Q9UHC9 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.89□□□□□ -1.79
NPC1L1Q9UHC9 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.89□□□□□ -1.79
NPC1L1Q9UHC9 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.89□□□□□ -1.79
NPC1L1Q9UHC9 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.89□□□□□ -1.79
NPC1L1Q9UHC9 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.89□□□□□ -1.79
NPC1L1Q9UHC9 AC023824.3-201ENST00000569003 562 ntBASIC3.89□□□□□ -1.79
NPC1L1Q9UHC9 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.89□□□□□ -1.79
NPC1L1Q9UHC9 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC3.89□□□□□ -1.79
NPC1L1Q9UHC9 AC107294.3-201ENST00000609211 526 ntBASIC3.89□□□□□ -1.79
NPC1L1Q9UHC9 AL359535.1-201ENST00000612100 1087 ntBASIC3.89□□□□□ -1.79
NPC1L1Q9UHC9 PLCE1P1-201ENST00000622094 305 ntBASIC3.89□□□□□ -1.79
NPC1L1Q9UHC9 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.89□□□□□ -1.79
NPC1L1Q9UHC9 AC011978.2-201ENST00000569835 2054 ntBASIC3.89□□□□□ -1.79
NPC1L1Q9UHC9 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
NPC1L1Q9UHC9 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.89□□□□□ -1.79
NPC1L1Q9UHC9 RNU6-356P-201ENST00000384140 107 ntBASIC3.89□□□□□ -1.79
NPC1L1Q9UHC9 SNORD65C-201ENST00000390962 71 ntBASIC3.89□□□□□ -1.79
NPC1L1Q9UHC9 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.89□□□□□ -1.79
NPC1L1Q9UHC9 AL355615.1-201ENST00000406187 641 ntBASIC3.89□□□□□ -1.79
NPC1L1Q9UHC9 UBE2V1P9-201ENST00000414760 368 ntBASIC3.89□□□□□ -1.79
NPC1L1Q9UHC9 NUP35P2-201ENST00000416748 943 ntBASIC3.89□□□□□ -1.79
NPC1L1Q9UHC9 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.89□□□□□ -1.79
NPC1L1Q9UHC9 AL592437.1-201ENST00000443781 492 ntBASIC3.89□□□□□ -1.79
NPC1L1Q9UHC9 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.89□□□□□ -1.79
NPC1L1Q9UHC9 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.89□□□□□ -1.79
NPC1L1Q9UHC9 RPL21P41-201ENST00000459863 264 ntBASIC3.89□□□□□ -1.79
NPC1L1Q9UHC9 AP000873.1-201ENST00000463987 400 ntBASIC3.89□□□□□ -1.79
NPC1L1Q9UHC9 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.89□□□□□ -1.79
NPC1L1Q9UHC9 AC087385.1-201ENST00000475062 312 ntBASIC3.89□□□□□ -1.79
NPC1L1Q9UHC9 AC015724.1-201ENST00000478577 156 ntBASIC3.89□□□□□ -1.79
NPC1L1Q9UHC9 AP004217.1-201ENST00000480579 346 ntBASIC3.89□□□□□ -1.79
NPC1L1Q9UHC9 AC092902.1-201ENST00000486999 259 ntBASIC3.89□□□□□ -1.79
NPC1L1Q9UHC9 VN1R104P-201ENST00000505115 1009 ntBASIC3.89□□□□□ -1.79
NPC1L1Q9UHC9 SNX5P1-201ENST00000505757 1041 ntBASIC3.89□□□□□ -1.79
NPC1L1Q9UHC9 AP003355.1-201ENST00000518956 587 ntBASIC3.89□□□□□ -1.79
NPC1L1Q9UHC9 RPL12P22-201ENST00000519073 490 ntBASIC3.89□□□□□ -1.79
NPC1L1Q9UHC9 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.89□□□□□ -1.79
NPC1L1Q9UHC9 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.89□□□□□ -1.79
NPC1L1Q9UHC9 AC055876.1-202ENST00000567053 138 ntBASIC3.89□□□□□ -1.79
NPC1L1Q9UHC9 MIR3162-201ENST00000581818 82 ntBASIC3.89□□□□□ -1.79
NPC1L1Q9UHC9 AL390838.2-201ENST00000602394 274 ntBASIC3.89□□□□□ -1.79
NPC1L1Q9UHC9 AL355493.4-201ENST00000618530 292 ntBASIC3.89□□□□□ -1.79
NPC1L1Q9UHC9 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.89□□□□□ -1.79
NPC1L1Q9UHC9 AP002371.2-201ENST00000624450 503 ntBASIC3.89□□□□□ -1.79
NPC1L1Q9UHC9 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.88□□□□□ -1.79
NPC1L1Q9UHC9 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.88□□□□□ -1.79
NPC1L1Q9UHC9 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NPC1L1Q9UHC9 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NPC1L1Q9UHC9 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NPC1L1Q9UHC9 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
NPC1L1Q9UHC9 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
NPC1L1Q9UHC9 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
NPC1L1Q9UHC9 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
NPC1L1Q9UHC9 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
NPC1L1Q9UHC9 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
NPC1L1Q9UHC9 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
NPC1L1Q9UHC9 AC246680.2-201ENST00000422106 389 ntBASIC3.88□□□□□ -1.79
NPC1L1Q9UHC9 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.88□□□□□ -1.79
NPC1L1Q9UHC9 FTH1P1-201ENST00000437933 532 ntBASIC3.88□□□□□ -1.79
NPC1L1Q9UHC9 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.88□□□□□ -1.79
NPC1L1Q9UHC9 RPL23AP15-201ENST00000450202 459 ntBASIC3.88□□□□□ -1.79
NPC1L1Q9UHC9 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.88□□□□□ -1.79
NPC1L1Q9UHC9 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
NPC1L1Q9UHC9 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC3.88□□□□□ -1.79
NPC1L1Q9UHC9 AC104629.1-201ENST00000494226 508 ntBASIC3.88□□□□□ -1.79
NPC1L1Q9UHC9 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
NPC1L1Q9UHC9 TRAV31-201ENST00000502780 342 ntBASIC3.88□□□□□ -1.79
NPC1L1Q9UHC9 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
NPC1L1Q9UHC9 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
NPC1L1Q9UHC9 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
NPC1L1Q9UHC9 RNU6-488P-201ENST00000515918 99 ntBASIC3.88□□□□□ -1.79
NPC1L1Q9UHC9 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.88□□□□□ -1.79
NPC1L1Q9UHC9 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
NPC1L1Q9UHC9 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.88□□□□□ -1.79
NPC1L1Q9UHC9 AC087894.1-201ENST00000538359 518 ntBASIC3.88□□□□□ -1.79
NPC1L1Q9UHC9 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.88□□□□□ -1.79
NPC1L1Q9UHC9 OR6C73P-201ENST00000546432 358 ntBASIC3.88□□□□□ -1.79
NPC1L1Q9UHC9 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.88□□□□□ -1.79
NPC1L1Q9UHC9 AC007336.1-201ENST00000576365 3828 ntBASIC3.88□□□□□ -1.79
NPC1L1Q9UHC9 RN7SL622P-201ENST00000585292 275 ntBASIC3.88□□□□□ -1.79
NPC1L1Q9UHC9 AC112503.1-201ENST00000608436 391 ntBASIC3.88□□□□□ -1.79
NPC1L1Q9UHC9 AC092574.1-201ENST00000609771 420 ntBASIC3.88□□□□□ -1.79
NPC1L1Q9UHC9 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NPC1L1Q9UHC9 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
NPC1L1Q9UHC9 MIR4496-201ENST00000635896 61 ntBASIC3.88□□□□□ -1.79
NPC1L1Q9UHC9 FAM157B-203ENST00000639350 358 ntBASIC3.88□□□□□ -1.79
NPC1L1Q9UHC9 AC025263.3-201ENST00000622965 1396 ntBASIC3.87□□□□□ -1.79
NPC1L1Q9UHC9 OR5J1P-201ENST00000313544 939 ntBASIC3.87□□□□□ -1.79
NPC1L1Q9UHC9 FTLP6-201ENST00000355274 422 ntBASIC3.87□□□□□ -1.79
NPC1L1Q9UHC9 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.87□□□□□ -1.79
NPC1L1Q9UHC9 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NPC1L1Q9UHC9 SNORA18.3-201ENST00000384122 132 ntBASIC3.87□□□□□ -1.79
NPC1L1Q9UHC9 U6.112-201ENST00000384129 70 ntBASIC3.87□□□□□ -1.79
NPC1L1Q9UHC9 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NPC1L1Q9UHC9 TMSB4XP8-201ENST00000402089 135 ntBASIC3.87□□□□□ -1.79
NPC1L1Q9UHC9 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.87□□□□□ -1.79
NPC1L1Q9UHC9 TMSB4XP6-201ENST00000415187 135 ntBASIC3.87□□□□□ -1.79
NPC1L1Q9UHC9 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.87□□□□□ -1.79
NPC1L1Q9UHC9 TMSB4XP1-201ENST00000424567 135 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms