Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.95□□□□□ -1.78
HCN3Q9P1Z3 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.95□□□□□ -1.78
HCN3Q9P1Z3 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.95□□□□□ -1.78
HCN3Q9P1Z3 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.95□□□□□ -1.78
HCN3Q9P1Z3 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HCN3Q9P1Z3 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.95□□□□□ -1.78
HCN3Q9P1Z3 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HCN3Q9P1Z3 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.95□□□□□ -1.78
HCN3Q9P1Z3 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.95□□□□□ -1.78
HCN3Q9P1Z3 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.95□□□□□ -1.78
HCN3Q9P1Z3 CYP4A43P-201ENST00000568156 121 ntBASIC3.95□□□□□ -1.78
HCN3Q9P1Z3 RN7SL600P-201ENST00000581811 299 ntBASIC3.95□□□□□ -1.78
HCN3Q9P1Z3 PIGPP4-201ENST00000584447 307 ntBASIC3.95□□□□□ -1.78
HCN3Q9P1Z3 AC022916.3-201ENST00000592961 742 ntBASIC3.95□□□□□ -1.78
HCN3Q9P1Z3 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.95□□□□□ -1.78
HCN3Q9P1Z3 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HCN3Q9P1Z3 U73023.1-201ENST00000603134 700 ntBASIC3.95□□□□□ -1.78
HCN3Q9P1Z3 AC112187.2-201ENST00000604345 283 ntBASIC3.95□□□□□ -1.78
HCN3Q9P1Z3 AL022161.1-201ENST00000604390 213 ntBASIC3.95□□□□□ -1.78
HCN3Q9P1Z3 AL356585.4-201ENST00000623078 1229 ntBASIC3.95□□□□□ -1.78
HCN3Q9P1Z3 AC091965.5-201ENST00000624785 342 ntBASIC3.95□□□□□ -1.78
HCN3Q9P1Z3 AC138649.5-201ENST00000637456 137 ntBASIC3.95□□□□□ -1.78
HCN3Q9P1Z3 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HCN3Q9P1Z3 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.95□□□□□ -1.78
HCN3Q9P1Z3 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
HCN3Q9P1Z3 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HCN3Q9P1Z3 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HCN3Q9P1Z3 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
HCN3Q9P1Z3 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HCN3Q9P1Z3 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HCN3Q9P1Z3 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HCN3Q9P1Z3 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HCN3Q9P1Z3 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.94□□□□□ -1.78
HCN3Q9P1Z3 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.94□□□□□ -1.78
HCN3Q9P1Z3 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
HCN3Q9P1Z3 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
HCN3Q9P1Z3 OR11H4-201ENST00000315409 1082 ntBASIC3.94□□□□□ -1.78
HCN3Q9P1Z3 RNU4-40P-201ENST00000364351 143 ntBASIC3.94□□□□□ -1.78
HCN3Q9P1Z3 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.94□□□□□ -1.78
HCN3Q9P1Z3 RNU6-769P-201ENST00000384407 104 ntBASIC3.94□□□□□ -1.78
HCN3Q9P1Z3 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
HCN3Q9P1Z3 RAD23BP2-201ENST00000416003 1207 ntBASIC3.94□□□□□ -1.78
HCN3Q9P1Z3 AC004975.1-201ENST00000428733 208 ntBASIC3.94□□□□□ -1.78
HCN3Q9P1Z3 AC129850.1-201ENST00000436203 508 ntBASIC3.94□□□□□ -1.78
HCN3Q9P1Z3 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.94□□□□□ -1.78
HCN3Q9P1Z3 KATNBL1P3-201ENST00000443475 909 ntBASIC3.94□□□□□ -1.78
HCN3Q9P1Z3 BMI1P1-201ENST00000445879 941 ntBASIC3.94□□□□□ -1.78
HCN3Q9P1Z3 AC114755.5-201ENST00000447760 831 ntBASIC3.94□□□□□ -1.78
HCN3Q9P1Z3 AC009961.3-201ENST00000449832 765 ntBASIC3.94□□□□□ -1.78
HCN3Q9P1Z3 AL122001.1-201ENST00000457027 370 ntBASIC3.94□□□□□ -1.78
HCN3Q9P1Z3 AP000873.1-201ENST00000463987 400 ntBASIC3.94□□□□□ -1.78
HCN3Q9P1Z3 AC109486.1-201ENST00000486833 374 ntBASIC3.94□□□□□ -1.78
HCN3Q9P1Z3 AC078817.1-201ENST00000492623 435 ntBASIC3.94□□□□□ -1.78
HCN3Q9P1Z3 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.94□□□□□ -1.78
HCN3Q9P1Z3 PRELID3BP7-201ENST00000503606 469 ntBASIC3.94□□□□□ -1.78
HCN3Q9P1Z3 AC105313.1-201ENST00000509121 353 ntBASIC3.94□□□□□ -1.78
HCN3Q9P1Z3 MTND5P13-201ENST00000513046 1079 ntBASIC3.94□□□□□ -1.78
HCN3Q9P1Z3 MTND4LP18-201ENST00000526864 291 ntBASIC3.94□□□□□ -1.78
HCN3Q9P1Z3 MTCYBP41-201ENST00000528913 1123 ntBASIC3.94□□□□□ -1.78
HCN3Q9P1Z3 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.94□□□□□ -1.78
HCN3Q9P1Z3 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
HCN3Q9P1Z3 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.94□□□□□ -1.78
HCN3Q9P1Z3 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.94□□□□□ -1.78
HCN3Q9P1Z3 ACTR3BP3-201ENST00000565577 979 ntBASIC3.94□□□□□ -1.78
HCN3Q9P1Z3 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.94□□□□□ -1.78
HCN3Q9P1Z3 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.94□□□□□ -1.78
HCN3Q9P1Z3 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HCN3Q9P1Z3 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.94□□□□□ -1.78
HCN3Q9P1Z3 AL020997.2-201ENST00000602607 184 ntBASIC3.94□□□□□ -1.78
HCN3Q9P1Z3 AC012360.2-201ENST00000609349 391 ntBASIC3.94□□□□□ -1.78
HCN3Q9P1Z3 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.94□□□□□ -1.78
HCN3Q9P1Z3 AC093783.1-201ENST00000612976 329 ntBASIC3.94□□□□□ -1.78
HCN3Q9P1Z3 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.94□□□□□ -1.78
HCN3Q9P1Z3 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.94□□□□□ -1.78
HCN3Q9P1Z3 C2orf27A-204ENST00000623058 969 ntBASIC3.94□□□□□ -1.78
HCN3Q9P1Z3 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
HCN3Q9P1Z3 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HCN3Q9P1Z3 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HCN3Q9P1Z3 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HCN3Q9P1Z3 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.93□□□□□ -1.78
HCN3Q9P1Z3 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.93□□□□□ -1.78
HCN3Q9P1Z3 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HCN3Q9P1Z3 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.93□□□□□ -1.78
HCN3Q9P1Z3 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.93□□□□□ -1.78
HCN3Q9P1Z3 AC006378.2-201ENST00000623178 2476 ntBASIC3.93□□□□□ -1.78
HCN3Q9P1Z3 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HCN3Q9P1Z3 RNU5F-6P-201ENST00000362979 116 ntBASIC3.93□□□□□ -1.78
HCN3Q9P1Z3 RNA5SP317-201ENST00000410176 116 ntBASIC3.93□□□□□ -1.78
HCN3Q9P1Z3 RN7SKP33-201ENST00000410942 340 ntBASIC3.93□□□□□ -1.78
HCN3Q9P1Z3 RNA5SP311-201ENST00000411290 116 ntBASIC3.93□□□□□ -1.78
HCN3Q9P1Z3 PGBD4P8-201ENST00000412993 562 ntBASIC3.93□□□□□ -1.78
HCN3Q9P1Z3 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.93□□□□□ -1.78
HCN3Q9P1Z3 AC108032.1-201ENST00000416706 207 ntBASIC3.93□□□□□ -1.78
HCN3Q9P1Z3 TOMM22P1-201ENST00000418578 312 ntBASIC3.93□□□□□ -1.78
HCN3Q9P1Z3 AL137014.1-201ENST00000420490 1226 ntBASIC3.93□□□□□ -1.78
HCN3Q9P1Z3 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HCN3Q9P1Z3 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.93□□□□□ -1.78
HCN3Q9P1Z3 AC098826.1-201ENST00000433943 471 ntBASIC3.93□□□□□ -1.78
HCN3Q9P1Z3 AC091862.1-201ENST00000438016 1100 ntBASIC3.93□□□□□ -1.78
HCN3Q9P1Z3 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms