Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.42□□□□□ -1.7
PARPBPQ9NWS1 AC092832.1-201ENST00000422934 400 ntBASIC4.42□□□□□ -1.7
PARPBPQ9NWS1 BRWD1P3-201ENST00000428816 390 ntBASIC4.42□□□□□ -1.7
PARPBPQ9NWS1 RBMY2QP-201ENST00000429799 1147 ntBASIC4.42□□□□□ -1.7
PARPBPQ9NWS1 ATP5JP1-201ENST00000431631 322 ntBASIC4.42□□□□□ -1.7
PARPBPQ9NWS1 RPL37P1-201ENST00000432310 284 ntBASIC4.42□□□□□ -1.7
PARPBPQ9NWS1 BX323845.1-201ENST00000432417 179 ntBASIC4.42□□□□□ -1.7
PARPBPQ9NWS1 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC4.42□□□□□ -1.7
PARPBPQ9NWS1 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PARPBPQ9NWS1 HMGB1P18-201ENST00000438801 619 ntBASIC4.42□□□□□ -1.7
PARPBPQ9NWS1 PTMAP6-201ENST00000439110 327 ntBASIC4.42□□□□□ -1.7
PARPBPQ9NWS1 AL450023.3-201ENST00000440592 271 ntBASIC4.42□□□□□ -1.7
PARPBPQ9NWS1 AC104651.2-201ENST00000447549 528 ntBASIC4.42□□□□□ -1.7
PARPBPQ9NWS1 AC005297.2-201ENST00000450430 606 ntBASIC4.42□□□□□ -1.7
PARPBPQ9NWS1 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PARPBPQ9NWS1 MTCO3P2-201ENST00000457365 171 ntBASIC4.42□□□□□ -1.7
PARPBPQ9NWS1 RPL32P9-201ENST00000487963 407 ntBASIC4.42□□□□□ -1.7
PARPBPQ9NWS1 AP001025.2-201ENST00000490908 477 ntBASIC4.42□□□□□ -1.7
PARPBPQ9NWS1 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.42□□□□□ -1.7
PARPBPQ9NWS1 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.42□□□□□ -1.7
PARPBPQ9NWS1 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PARPBPQ9NWS1 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.42□□□□□ -1.7
PARPBPQ9NWS1 RNA5SP360-201ENST00000516555 118 ntBASIC4.42□□□□□ -1.7
PARPBPQ9NWS1 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.42□□□□□ -1.7
PARPBPQ9NWS1 AC022861.1-201ENST00000522981 663 ntBASIC4.42□□□□□ -1.7
PARPBPQ9NWS1 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.42□□□□□ -1.7
PARPBPQ9NWS1 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.42□□□□□ -1.7
PARPBPQ9NWS1 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
PARPBPQ9NWS1 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.42□□□□□ -1.7
PARPBPQ9NWS1 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
PARPBPQ9NWS1 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.42□□□□□ -1.7
PARPBPQ9NWS1 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.42□□□□□ -1.7
PARPBPQ9NWS1 BX323046.1-201ENST00000610145 535 ntBASIC4.42□□□□□ -1.7
PARPBPQ9NWS1 AC105429.2-201ENST00000610567 517 ntBASIC4.42□□□□□ -1.7
PARPBPQ9NWS1 AC010205.1-201ENST00000616668 449 ntBASIC4.42□□□□□ -1.7
PARPBPQ9NWS1 LINC00901.1-201ENST00000617252 152 ntBASIC4.42□□□□□ -1.7
PARPBPQ9NWS1 AC008121.3-201ENST00000618726 433 ntBASIC4.42□□□□□ -1.7
PARPBPQ9NWS1 MIR6719-201ENST00000622428 87 ntBASIC4.42□□□□□ -1.7
PARPBPQ9NWS1 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.42□□□□□ -1.7
PARPBPQ9NWS1 AL133216.2-202ENST00000634512 349 ntBASIC4.42□□□□□ -1.7
PARPBPQ9NWS1 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PARPBPQ9NWS1 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
PARPBPQ9NWS1 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
PARPBPQ9NWS1 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.42□□□□□ -1.7
PARPBPQ9NWS1 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PARPBPQ9NWS1 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.42□□□□□ -1.7
PARPBPQ9NWS1 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.42□□□□□ -1.7
PARPBPQ9NWS1 MAPK10-304ENST00000641341 3984 ntBASIC4.42□□□□□ -1.7
PARPBPQ9NWS1 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.42□□□□□ -1.7
PARPBPQ9NWS1 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
PARPBPQ9NWS1 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PARPBPQ9NWS1 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
PARPBPQ9NWS1 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PARPBPQ9NWS1 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PARPBPQ9NWS1 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
PARPBPQ9NWS1 INTS6P1-201ENST00000504674 2530 ntBASIC4.41□□□□□ -1.7
PARPBPQ9NWS1 AC006020.1-201ENST00000420179 1854 ntBASIC4.41□□□□□ -1.7
PARPBPQ9NWS1 OR14L1P-202ENST00000641545 3009 ntBASIC4.41□□□□□ -1.7
PARPBPQ9NWS1 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.41□□□□□ -1.7
PARPBPQ9NWS1 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.41□□□□□ -1.7
PARPBPQ9NWS1 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
PARPBPQ9NWS1 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PARPBPQ9NWS1 RNU1-85P-201ENST00000364127 164 ntBASIC4.41□□□□□ -1.7
PARPBPQ9NWS1 AL136116.1-201ENST00000403591 381 ntBASIC4.41□□□□□ -1.7
PARPBPQ9NWS1 U3.32-201ENST00000408116 212 ntBASIC4.41□□□□□ -1.7
PARPBPQ9NWS1 Y_RNA.615-201ENST00000410769 117 ntBASIC4.41□□□□□ -1.7
PARPBPQ9NWS1 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.41□□□□□ -1.7
PARPBPQ9NWS1 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.41□□□□□ -1.7
PARPBPQ9NWS1 AC104333.2-201ENST00000422630 192 ntBASIC4.41□□□□□ -1.7
PARPBPQ9NWS1 AC006548.1-201ENST00000427470 102 ntBASIC4.41□□□□□ -1.7
PARPBPQ9NWS1 SRIP2-201ENST00000428470 166 ntBASIC4.41□□□□□ -1.7
PARPBPQ9NWS1 RPL36P19-201ENST00000430744 301 ntBASIC4.41□□□□□ -1.7
PARPBPQ9NWS1 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC4.41□□□□□ -1.7
PARPBPQ9NWS1 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.41□□□□□ -1.7
PARPBPQ9NWS1 PPIAP13-201ENST00000434706 478 ntBASIC4.41□□□□□ -1.7
PARPBPQ9NWS1 AL353597.2-202ENST00000434901 373 ntBASIC4.41□□□□□ -1.7
PARPBPQ9NWS1 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.41□□□□□ -1.7
PARPBPQ9NWS1 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.41□□□□□ -1.7
PARPBPQ9NWS1 RPL34P20-201ENST00000442771 351 ntBASIC4.41□□□□□ -1.7
PARPBPQ9NWS1 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.41□□□□□ -1.7
PARPBPQ9NWS1 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.41□□□□□ -1.7
PARPBPQ9NWS1 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.41□□□□□ -1.7
PARPBPQ9NWS1 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.41□□□□□ -1.7
PARPBPQ9NWS1 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.41□□□□□ -1.7
PARPBPQ9NWS1 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.41□□□□□ -1.7
PARPBPQ9NWS1 SNORD19B-201ENST00000459623 84 ntBASIC4.41□□□□□ -1.7
PARPBPQ9NWS1 RN7SL610P-201ENST00000463845 291 ntBASIC4.41□□□□□ -1.7
PARPBPQ9NWS1 MRPS17P3-201ENST00000465453 385 ntBASIC4.41□□□□□ -1.7
PARPBPQ9NWS1 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.41□□□□□ -1.7
PARPBPQ9NWS1 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.41□□□□□ -1.7
PARPBPQ9NWS1 SCARNA24.1-201ENST00000516465 137 ntBASIC4.41□□□□□ -1.7
PARPBPQ9NWS1 RNU6-1314P-201ENST00000517139 104 ntBASIC4.41□□□□□ -1.7
PARPBPQ9NWS1 NARSP2-201ENST00000518524 679 ntBASIC4.41□□□□□ -1.7
PARPBPQ9NWS1 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.41□□□□□ -1.7
PARPBPQ9NWS1 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.41□□□□□ -1.7
PARPBPQ9NWS1 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.41□□□□□ -1.7
PARPBPQ9NWS1 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.41□□□□□ -1.7
PARPBPQ9NWS1 ELOCP31-201ENST00000540463 467 ntBASIC4.41□□□□□ -1.7
PARPBPQ9NWS1 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.41□□□□□ -1.7
PARPBPQ9NWS1 AC026464.5-201ENST00000562497 722 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms