Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 MIR449B-201ENST00000384995 97 ntBASIC4.44□□□□□ -1.7
SMC4Q9NTJ3 U3.29-201ENST00000391296 212 ntBASIC4.44□□□□□ -1.7
SMC4Q9NTJ3 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.44□□□□□ -1.7
SMC4Q9NTJ3 AL583834.1-201ENST00000406943 343 ntBASIC4.44□□□□□ -1.7
SMC4Q9NTJ3 RPS29P4-201ENST00000414733 161 ntBASIC4.44□□□□□ -1.7
SMC4Q9NTJ3 SSR1P2-201ENST00000415208 787 ntBASIC4.44□□□□□ -1.7
SMC4Q9NTJ3 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC4.44□□□□□ -1.7
SMC4Q9NTJ3 AC012065.2-201ENST00000421295 375 ntBASIC4.44□□□□□ -1.7
SMC4Q9NTJ3 RPL23AP74-201ENST00000437246 471 ntBASIC4.44□□□□□ -1.7
SMC4Q9NTJ3 RPL39P6-201ENST00000448289 150 ntBASIC4.44□□□□□ -1.7
SMC4Q9NTJ3 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.44□□□□□ -1.7
SMC4Q9NTJ3 CEACAMP4-201ENST00000457676 421 ntBASIC4.44□□□□□ -1.7
SMC4Q9NTJ3 RPL31P13-201ENST00000484151 370 ntBASIC4.44□□□□□ -1.7
SMC4Q9NTJ3 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC4.44□□□□□ -1.7
SMC4Q9NTJ3 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.44□□□□□ -1.7
SMC4Q9NTJ3 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.44□□□□□ -1.7
SMC4Q9NTJ3 PCBP2P3-201ENST00000509726 843 ntBASIC4.44□□□□□ -1.7
SMC4Q9NTJ3 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.44□□□□□ -1.7
SMC4Q9NTJ3 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.44□□□□□ -1.7
SMC4Q9NTJ3 OR5B10P-201ENST00000532869 642 ntBASIC4.44□□□□□ -1.7
SMC4Q9NTJ3 PDCL2P2-201ENST00000533651 189 ntBASIC4.44□□□□□ -1.7
SMC4Q9NTJ3 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.44□□□□□ -1.7
SMC4Q9NTJ3 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.44□□□□□ -1.7
SMC4Q9NTJ3 AC245036.5-201ENST00000596330 847 ntBASIC4.44□□□□□ -1.7
SMC4Q9NTJ3 AC103881.1-201ENST00000603476 538 ntBASIC4.44□□□□□ -1.7
SMC4Q9NTJ3 AL450336.1-201ENST00000605180 586 ntBASIC4.44□□□□□ -1.7
SMC4Q9NTJ3 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.44□□□□□ -1.7
SMC4Q9NTJ3 AC006386.1-201ENST00000619436 415 ntBASIC4.44□□□□□ -1.7
SMC4Q9NTJ3 AC092650.2-201ENST00000619984 902 ntBASIC4.44□□□□□ -1.7
SMC4Q9NTJ3 AC092628.2-201ENST00000622492 339 ntBASIC4.44□□□□□ -1.7
SMC4Q9NTJ3 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
SMC4Q9NTJ3 MFSD8-233ENST00000641482 4860 ntBASIC4.44□□□□□ -1.7
SMC4Q9NTJ3 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
SMC4Q9NTJ3 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SMC4Q9NTJ3 PRO1804-201ENST00000623780 2050 ntBASIC4.44□□□□□ -1.7
SMC4Q9NTJ3 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SMC4Q9NTJ3 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.43□□□□□ -1.7
SMC4Q9NTJ3 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SMC4Q9NTJ3 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
SMC4Q9NTJ3 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SMC4Q9NTJ3 AC032011.1-201ENST00000611703 1549 ntBASIC4.43□□□□□ -1.7
SMC4Q9NTJ3 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
SMC4Q9NTJ3 AC093908.1-201ENST00000623125 8092 ntBASIC4.43□□□□□ -1.7
SMC4Q9NTJ3 RNU4-35P-201ENST00000362588 141 ntBASIC4.43□□□□□ -1.7
SMC4Q9NTJ3 RNU6-263P-201ENST00000363811 107 ntBASIC4.43□□□□□ -1.7
SMC4Q9NTJ3 RNU6-621P-201ENST00000364752 109 ntBASIC4.43□□□□□ -1.7
SMC4Q9NTJ3 SNORD116.1-201ENST00000365628 92 ntBASIC4.43□□□□□ -1.7
SMC4Q9NTJ3 Y_RNA.408-201ENST00000383987 102 ntBASIC4.43□□□□□ -1.7
SMC4Q9NTJ3 AC068533.2-201ENST00000411872 306 ntBASIC4.43□□□□□ -1.7
SMC4Q9NTJ3 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.43□□□□□ -1.7
SMC4Q9NTJ3 AIMP1P1-201ENST00000418670 937 ntBASIC4.43□□□□□ -1.7
SMC4Q9NTJ3 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SMC4Q9NTJ3 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC4.43□□□□□ -1.7
SMC4Q9NTJ3 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.43□□□□□ -1.7
SMC4Q9NTJ3 HMGN2P31-201ENST00000432430 273 ntBASIC4.43□□□□□ -1.7
SMC4Q9NTJ3 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.43□□□□□ -1.7
SMC4Q9NTJ3 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC4.43□□□□□ -1.7
SMC4Q9NTJ3 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.43□□□□□ -1.7
SMC4Q9NTJ3 RBMY2UP-201ENST00000453474 324 ntBASIC4.43□□□□□ -1.7
SMC4Q9NTJ3 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.43□□□□□ -1.7
SMC4Q9NTJ3 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC4.43□□□□□ -1.7
SMC4Q9NTJ3 AC026784.1-201ENST00000507986 352 ntBASIC4.43□□□□□ -1.7
SMC4Q9NTJ3 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.43□□□□□ -1.7
SMC4Q9NTJ3 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC4.43□□□□□ -1.7
SMC4Q9NTJ3 AP004371.1-201ENST00000525240 214 ntBASIC4.43□□□□□ -1.7
SMC4Q9NTJ3 MTCYBP41-201ENST00000528913 1123 ntBASIC4.43□□□□□ -1.7
SMC4Q9NTJ3 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.43□□□□□ -1.7
SMC4Q9NTJ3 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.43□□□□□ -1.7
SMC4Q9NTJ3 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC4.43□□□□□ -1.7
SMC4Q9NTJ3 MTND1P24-201ENST00000552175 861 ntBASIC4.43□□□□□ -1.7
SMC4Q9NTJ3 HSPE1P3-201ENST00000559254 309 ntBASIC4.43□□□□□ -1.7
SMC4Q9NTJ3 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.43□□□□□ -1.7
SMC4Q9NTJ3 LARP7P2-201ENST00000575306 125 ntBASIC4.43□□□□□ -1.7
SMC4Q9NTJ3 MIR4637-201ENST00000582405 84 ntBASIC4.43□□□□□ -1.7
SMC4Q9NTJ3 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
SMC4Q9NTJ3 AL451074.6-201ENST00000608512 729 ntBASIC4.43□□□□□ -1.7
SMC4Q9NTJ3 AC006329.2-201ENST00000611491 394 ntBASIC4.43□□□□□ -1.7
SMC4Q9NTJ3 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
SMC4Q9NTJ3 AP001002.2-201ENST00000625137 386 ntBASIC4.43□□□□□ -1.7
SMC4Q9NTJ3 U6.101-201ENST00000637707 76 ntBASIC4.43□□□□□ -1.7
SMC4Q9NTJ3 MIR1322-201ENST00000638013 71 ntBASIC4.43□□□□□ -1.7
SMC4Q9NTJ3 AL513302.2-201ENST00000562313 1842 ntBASIC4.43□□□□□ -1.7
SMC4Q9NTJ3 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.43□□□□□ -1.7
SMC4Q9NTJ3 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.42□□□□□ -1.7
SMC4Q9NTJ3 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.42□□□□□ -1.7
SMC4Q9NTJ3 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.42□□□□□ -1.7
SMC4Q9NTJ3 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
SMC4Q9NTJ3 MIR218-2-201ENST00000385006 110 ntBASIC4.42□□□□□ -1.7
SMC4Q9NTJ3 MIR607-201ENST00000385241 96 ntBASIC4.42□□□□□ -1.7
SMC4Q9NTJ3 SNORD17-201ENST00000390930 237 ntBASIC4.42□□□□□ -1.7
SMC4Q9NTJ3 RPL30P2-201ENST00000414021 291 ntBASIC4.42□□□□□ -1.7
SMC4Q9NTJ3 AL592310.1-201ENST00000414330 671 ntBASIC4.42□□□□□ -1.7
SMC4Q9NTJ3 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC4.42□□□□□ -1.7
SMC4Q9NTJ3 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC4.42□□□□□ -1.7
SMC4Q9NTJ3 RPL21P112-201ENST00000434403 463 ntBASIC4.42□□□□□ -1.7
SMC4Q9NTJ3 AC092427.1-201ENST00000439177 601 ntBASIC4.42□□□□□ -1.7
SMC4Q9NTJ3 AC092641.1-201ENST00000440229 772 ntBASIC4.42□□□□□ -1.7
SMC4Q9NTJ3 ELOCP13-201ENST00000443934 329 ntBASIC4.42□□□□□ -1.7
SMC4Q9NTJ3 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.42□□□□□ -1.7
SMC4Q9NTJ3 snoU109.4-201ENST00000458953 143 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms