Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 RNU6-156P-201ENST00000621869 107 ntBASIC2.68□□□□□ -1.98
CISHQ9NSE2 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CISHQ9NSE2 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
CISHQ9NSE2 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CISHQ9NSE2 FAM35CP-201ENST00000554755 2470 ntBASIC2.68□□□□□ -1.98
CISHQ9NSE2 MAPK10-322ENST00000641485 4530 ntBASIC2.67□□□□□ -1.98
CISHQ9NSE2 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CISHQ9NSE2 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.67□□□□□ -1.98
CISHQ9NSE2 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
CISHQ9NSE2 FTLP6-201ENST00000355274 422 ntBASIC2.67□□□□□ -1.98
CISHQ9NSE2 RNA5SP456-201ENST00000364002 114 ntBASIC2.67□□□□□ -1.98
CISHQ9NSE2 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CISHQ9NSE2 MIR518C-201ENST00000384822 101 ntBASIC2.67□□□□□ -1.98
CISHQ9NSE2 RNU1-101P-201ENST00000391171 127 ntBASIC2.67□□□□□ -1.98
CISHQ9NSE2 RPS4XP8-201ENST00000402039 771 ntBASIC2.67□□□□□ -1.98
CISHQ9NSE2 RPL34P26-201ENST00000445636 354 ntBASIC2.67□□□□□ -1.98
CISHQ9NSE2 Z99714.1-201ENST00000450463 807 ntBASIC2.67□□□□□ -1.98
CISHQ9NSE2 AC133134.1-201ENST00000466800 359 ntBASIC2.67□□□□□ -1.98
CISHQ9NSE2 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.67□□□□□ -1.98
CISHQ9NSE2 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.67□□□□□ -1.98
CISHQ9NSE2 ATG10-AS1-201ENST00000504846 648 ntBASIC2.67□□□□□ -1.98
CISHQ9NSE2 AC026412.2-201ENST00000512270 1075 ntBASIC2.67□□□□□ -1.98
CISHQ9NSE2 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.67□□□□□ -1.98
CISHQ9NSE2 RNA5SP148-201ENST00000516527 94 ntBASIC2.67□□□□□ -1.98
CISHQ9NSE2 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.67□□□□□ -1.98
CISHQ9NSE2 OR4V1P-201ENST00000525394 1140 ntBASIC2.67□□□□□ -1.98
CISHQ9NSE2 UBTFL10-201ENST00000528532 562 ntBASIC2.67□□□□□ -1.98
CISHQ9NSE2 AC023158.1-201ENST00000561632 1025 ntBASIC2.67□□□□□ -1.98
CISHQ9NSE2 AC006023.1-201ENST00000603944 259 ntBASIC2.67□□□□□ -1.98
CISHQ9NSE2 AL359535.1-201ENST00000612100 1087 ntBASIC2.67□□□□□ -1.98
CISHQ9NSE2 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC2.67□□□□□ -1.98
CISHQ9NSE2 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.67□□□□□ -1.98
CISHQ9NSE2 CRYM-AS1-204ENST00000637983 556 ntBASIC2.67□□□□□ -1.98
CISHQ9NSE2 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
CISHQ9NSE2 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.67□□□□□ -1.98
CISHQ9NSE2 AC117529.2-201ENST00000512159 2068 ntBASIC2.67□□□□□ -1.98
CISHQ9NSE2 AC011978.2-201ENST00000569835 2054 ntBASIC2.67□□□□□ -1.98
CISHQ9NSE2 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.66□□□□□ -1.98
CISHQ9NSE2 AC123912.3-201ENST00000600907 1367 ntBASIC2.66□□□□□ -1.98
CISHQ9NSE2 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CISHQ9NSE2 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC2.66□□□□□ -1.98
CISHQ9NSE2 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.66□□□□□ -1.98
CISHQ9NSE2 RNU6-452P-201ENST00000384406 107 ntBASIC2.66□□□□□ -1.98
CISHQ9NSE2 MIR142-201ENST00000384835 87 ntBASIC2.66□□□□□ -1.98
CISHQ9NSE2 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
CISHQ9NSE2 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.66□□□□□ -1.98
CISHQ9NSE2 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.66□□□□□ -1.98
CISHQ9NSE2 AC023128.2-201ENST00000420880 1223 ntBASIC2.66□□□□□ -1.98
CISHQ9NSE2 AC093392.2-201ENST00000450682 337 ntBASIC2.66□□□□□ -1.98
CISHQ9NSE2 BLNK-209ENST00000495266 440 ntTSL 5 BASIC2.66□□□□□ -1.98
CISHQ9NSE2 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.66□□□□□ -1.98
CISHQ9NSE2 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC2.66□□□□□ -1.98
CISHQ9NSE2 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC2.66□□□□□ -1.98
CISHQ9NSE2 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.66□□□□□ -1.98
CISHQ9NSE2 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.66□□□□□ -1.98
CISHQ9NSE2 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC2.66□□□□□ -1.98
CISHQ9NSE2 MIMT1-201ENST00000597105 1050 ntBASIC2.66□□□□□ -1.98
CISHQ9NSE2 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CISHQ9NSE2 U4.3-201ENST00000621047 82 ntBASIC2.66□□□□□ -1.98
CISHQ9NSE2 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
CISHQ9NSE2 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CISHQ9NSE2 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.66□□□□□ -1.98
CISHQ9NSE2 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC2.65□□□□□ -1.98
CISHQ9NSE2 MIR634-201ENST00000385208 97 ntBASIC2.65□□□□□ -1.99
CISHQ9NSE2 AL031679.1-201ENST00000400616 525 ntBASIC2.65□□□□□ -1.99
CISHQ9NSE2 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.65□□□□□ -1.99
CISHQ9NSE2 LAMTOR3P1-201ENST00000428620 370 ntBASIC2.65□□□□□ -1.99
CISHQ9NSE2 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CISHQ9NSE2 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC2.65□□□□□ -1.99
CISHQ9NSE2 Z77249.1-201ENST00000444622 1175 ntBASIC2.65□□□□□ -1.99
CISHQ9NSE2 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.65□□□□□ -1.99
CISHQ9NSE2 AC126389.1-201ENST00000477436 290 ntBASIC2.65□□□□□ -1.99
CISHQ9NSE2 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.65□□□□□ -1.99
CISHQ9NSE2 MTCO2P32-201ENST00000514865 403 ntBASIC2.65□□□□□ -1.99
CISHQ9NSE2 HMGB1P41-201ENST00000520234 440 ntBASIC2.65□□□□□ -1.99
CISHQ9NSE2 AC234778.2-201ENST00000566241 354 ntBASIC2.65□□□□□ -1.99
CISHQ9NSE2 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.65□□□□□ -1.99
CISHQ9NSE2 BNIP3P19-201ENST00000605397 577 ntBASIC2.65□□□□□ -1.99
CISHQ9NSE2 U6.48-201ENST00000618523 106 ntBASIC2.65□□□□□ -1.99
CISHQ9NSE2 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
CISHQ9NSE2 SCARNA15.3-201ENST00000626315 122 ntBASIC2.65□□□□□ -1.99
CISHQ9NSE2 SCARNA4.1-201ENST00000628597 123 ntBASIC2.65□□□□□ -1.99
CISHQ9NSE2 LRRC77P-213ENST00000637727 880 ntBASIC2.65□□□□□ -1.99
CISHQ9NSE2 AL136360.1-201ENST00000503377 1900 ntBASIC2.65□□□□□ -1.99
CISHQ9NSE2 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CISHQ9NSE2 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
CISHQ9NSE2 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CISHQ9NSE2 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.99
CISHQ9NSE2 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.65□□□□□ -1.99
CISHQ9NSE2 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CISHQ9NSE2 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.65□□□□□ -1.99
CISHQ9NSE2 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CISHQ9NSE2 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
CISHQ9NSE2 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CISHQ9NSE2 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.64□□□□□ -1.99
CISHQ9NSE2 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.64□□□□□ -1.99
CISHQ9NSE2 MTCO3P4-201ENST00000419236 787 ntBASIC2.64□□□□□ -1.99
CISHQ9NSE2 AC005517.2-201ENST00000424673 553 ntBASIC2.64□□□□□ -1.99
CISHQ9NSE2 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.64□□□□□ -1.99
CISHQ9NSE2 RPL17P49-201ENST00000443728 411 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms