Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.44□□□□□ -1.7
VPS45Q9NRW7 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
VPS45Q9NRW7 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
VPS45Q9NRW7 MIR372-201ENST00000362225 67 ntBASIC4.44□□□□□ -1.7
VPS45Q9NRW7 RNA5SP513-201ENST00000364648 118 ntBASIC4.44□□□□□ -1.7
VPS45Q9NRW7 AC007899.1-201ENST00000412776 775 ntBASIC4.44□□□□□ -1.7
VPS45Q9NRW7 AL117339.2-201ENST00000430475 180 ntBASIC4.44□□□□□ -1.7
VPS45Q9NRW7 USP9YP7-201ENST00000436723 430 ntBASIC4.44□□□□□ -1.7
VPS45Q9NRW7 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC4.44□□□□□ -1.7
VPS45Q9NRW7 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC4.44□□□□□ -1.7
VPS45Q9NRW7 USP9YP29-201ENST00000445112 563 ntBASIC4.44□□□□□ -1.7
VPS45Q9NRW7 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.44□□□□□ -1.7
VPS45Q9NRW7 EEF1E1P1-201ENST00000446998 430 ntBASIC4.44□□□□□ -1.7
VPS45Q9NRW7 USP9YP32-201ENST00000452432 430 ntBASIC4.44□□□□□ -1.7
VPS45Q9NRW7 AP000873.1-201ENST00000463987 400 ntBASIC4.44□□□□□ -1.7
VPS45Q9NRW7 PLGLA-201ENST00000465668 449 ntBASIC4.44□□□□□ -1.7
VPS45Q9NRW7 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.44□□□□□ -1.7
VPS45Q9NRW7 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.44□□□□□ -1.7
VPS45Q9NRW7 AC006499.6-201ENST00000511169 607 ntBASIC4.44□□□□□ -1.7
VPS45Q9NRW7 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
VPS45Q9NRW7 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.44□□□□□ -1.7
VPS45Q9NRW7 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.44□□□□□ -1.7
VPS45Q9NRW7 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC4.44□□□□□ -1.7
VPS45Q9NRW7 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.44□□□□□ -1.7
VPS45Q9NRW7 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.44□□□□□ -1.7
VPS45Q9NRW7 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC4.44□□□□□ -1.7
VPS45Q9NRW7 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.44□□□□□ -1.7
VPS45Q9NRW7 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
VPS45Q9NRW7 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.44□□□□□ -1.7
VPS45Q9NRW7 MIR5186-201ENST00000577504 120 ntBASIC4.44□□□□□ -1.7
VPS45Q9NRW7 MIR3944-201ENST00000581277 108 ntBASIC4.44□□□□□ -1.7
VPS45Q9NRW7 ABBA01006766.1-201ENST00000584728 294 ntBASIC4.44□□□□□ -1.7
VPS45Q9NRW7 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.44□□□□□ -1.7
VPS45Q9NRW7 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
VPS45Q9NRW7 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
VPS45Q9NRW7 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.44□□□□□ -1.7
VPS45Q9NRW7 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
VPS45Q9NRW7 MIR4727-201ENST00000622232 55 ntBASIC4.44□□□□□ -1.7
VPS45Q9NRW7 AC112200.1-201ENST00000625015 234 ntBASIC4.44□□□□□ -1.7
VPS45Q9NRW7 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.44□□□□□ -1.7
VPS45Q9NRW7 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.44□□□□□ -1.7
VPS45Q9NRW7 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.44□□□□□ -1.7
VPS45Q9NRW7 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
VPS45Q9NRW7 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VPS45Q9NRW7 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.44□□□□□ -1.7
VPS45Q9NRW7 AL031985.3-201ENST00000565390 2449 ntBASIC4.44□□□□□ -1.7
VPS45Q9NRW7 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
VPS45Q9NRW7 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
VPS45Q9NRW7 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VPS45Q9NRW7 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
VPS45Q9NRW7 AC027287.1-201ENST00000553115 1453 ntBASIC4.43□□□□□ -1.7
VPS45Q9NRW7 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.43□□□□□ -1.7
VPS45Q9NRW7 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.43□□□□□ -1.7
VPS45Q9NRW7 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
VPS45Q9NRW7 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
VPS45Q9NRW7 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.43□□□□□ -1.7
VPS45Q9NRW7 AC018529.3-201ENST00000624212 2254 ntBASIC4.43□□□□□ -1.7
VPS45Q9NRW7 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
VPS45Q9NRW7 LARP1BP1-201ENST00000506036 1359 ntBASIC4.43□□□□□ -1.7
VPS45Q9NRW7 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
VPS45Q9NRW7 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
VPS45Q9NRW7 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
VPS45Q9NRW7 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
VPS45Q9NRW7 XIAPP3-201ENST00000312918 795 ntBASIC4.43□□□□□ -1.7
VPS45Q9NRW7 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.43□□□□□ -1.7
VPS45Q9NRW7 RPL23AP57-201ENST00000332361 466 ntBASIC4.43□□□□□ -1.7
VPS45Q9NRW7 FGF7P2-201ENST00000332473 296 ntBASIC4.43□□□□□ -1.7
VPS45Q9NRW7 RNU5F-7P-201ENST00000363696 115 ntBASIC4.43□□□□□ -1.7
VPS45Q9NRW7 SNORD74.4-201ENST00000364129 80 ntBASIC4.43□□□□□ -1.7
VPS45Q9NRW7 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
VPS45Q9NRW7 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.43□□□□□ -1.7
VPS45Q9NRW7 MIR708-201ENST00000390708 88 ntBASIC4.43□□□□□ -1.7
VPS45Q9NRW7 U3.29-201ENST00000391296 212 ntBASIC4.43□□□□□ -1.7
VPS45Q9NRW7 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
VPS45Q9NRW7 RN7SKP159-201ENST00000410657 292 ntBASIC4.43□□□□□ -1.7
VPS45Q9NRW7 Y_RNA.619-201ENST00000410951 90 ntBASIC4.43□□□□□ -1.7
VPS45Q9NRW7 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC4.43□□□□□ -1.7
VPS45Q9NRW7 HMGB1P11-201ENST00000413899 637 ntBASIC4.43□□□□□ -1.7
VPS45Q9NRW7 RPS7P13-201ENST00000413955 498 ntBASIC4.43□□□□□ -1.7
VPS45Q9NRW7 SNRPFP1-201ENST00000414761 252 ntBASIC4.43□□□□□ -1.7
VPS45Q9NRW7 MTCO1P21-201ENST00000416634 589 ntBASIC4.43□□□□□ -1.7
VPS45Q9NRW7 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.43□□□□□ -1.7
VPS45Q9NRW7 AC244098.2-201ENST00000422068 99 ntBASIC4.43□□□□□ -1.7
VPS45Q9NRW7 AC092832.1-201ENST00000422934 400 ntBASIC4.43□□□□□ -1.7
VPS45Q9NRW7 RBMY1KP-201ENST00000423480 476 ntBASIC4.43□□□□□ -1.7
VPS45Q9NRW7 EIF1P3-201ENST00000423841 334 ntBASIC4.43□□□□□ -1.7
VPS45Q9NRW7 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.43□□□□□ -1.7
VPS45Q9NRW7 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.43□□□□□ -1.7
VPS45Q9NRW7 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.43□□□□□ -1.7
VPS45Q9NRW7 AL592447.1-201ENST00000447592 540 ntBASIC4.43□□□□□ -1.7
VPS45Q9NRW7 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.43□□□□□ -1.7
VPS45Q9NRW7 RPL7L1P8-201ENST00000469911 741 ntBASIC4.43□□□□□ -1.7
VPS45Q9NRW7 RPL23AP2-201ENST00000471227 466 ntBASIC4.43□□□□□ -1.7
VPS45Q9NRW7 AC087312.1-201ENST00000471411 480 ntBASIC4.43□□□□□ -1.7
VPS45Q9NRW7 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC4.43□□□□□ -1.7
VPS45Q9NRW7 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
VPS45Q9NRW7 AC116347.2-201ENST00000514912 523 ntBASIC4.43□□□□□ -1.7
VPS45Q9NRW7 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.43□□□□□ -1.7
VPS45Q9NRW7 RNU6-150P-201ENST00000516237 95 ntBASIC4.43□□□□□ -1.7
VPS45Q9NRW7 PHBP17-201ENST00000528576 541 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms