Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 AC068620.3-201ENST00000602749 560 ntBASIC3.32□□□□□ -1.88
POLE3Q9NRF9 AC010975.3-201ENST00000618727 978 ntBASIC3.32□□□□□ -1.88
POLE3Q9NRF9 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.32□□□□□ -1.88
POLE3Q9NRF9 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.32□□□□□ -1.88
POLE3Q9NRF9 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.32□□□□□ -1.88
POLE3Q9NRF9 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.32□□□□□ -1.88
POLE3Q9NRF9 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
POLE3Q9NRF9 FAM35CP-201ENST00000554755 2470 ntBASIC3.32□□□□□ -1.88
POLE3Q9NRF9 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
POLE3Q9NRF9 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
POLE3Q9NRF9 AC068647.1-201ENST00000489539 2265 ntBASIC3.31□□□□□ -1.88
POLE3Q9NRF9 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
POLE3Q9NRF9 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
POLE3Q9NRF9 SNORA14A-201ENST00000364773 135 ntBASIC3.31□□□□□ -1.88
POLE3Q9NRF9 AC007066.1-201ENST00000392902 381 ntBASIC3.31□□□□□ -1.88
POLE3Q9NRF9 RPL7P60-201ENST00000397636 735 ntBASIC3.31□□□□□ -1.88
POLE3Q9NRF9 ATP5A1P2-201ENST00000412323 255 ntBASIC3.31□□□□□ -1.88
POLE3Q9NRF9 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.31□□□□□ -1.88
POLE3Q9NRF9 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.31□□□□□ -1.88
POLE3Q9NRF9 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.31□□□□□ -1.88
POLE3Q9NRF9 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.31□□□□□ -1.88
POLE3Q9NRF9 MTCYBP11-201ENST00000447254 1109 ntBASIC3.31□□□□□ -1.88
POLE3Q9NRF9 RPL39P6-201ENST00000448289 150 ntBASIC3.31□□□□□ -1.88
POLE3Q9NRF9 PNPLA4P1-201ENST00000458328 305 ntBASIC3.31□□□□□ -1.88
POLE3Q9NRF9 RPS27P29-201ENST00000463110 252 ntBASIC3.31□□□□□ -1.88
POLE3Q9NRF9 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.31□□□□□ -1.88
POLE3Q9NRF9 CAB39P1-201ENST00000502277 460 ntBASIC3.31□□□□□ -1.88
POLE3Q9NRF9 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.31□□□□□ -1.88
POLE3Q9NRF9 RNA5SP380-201ENST00000517190 98 ntBASIC3.31□□□□□ -1.88
POLE3Q9NRF9 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.31□□□□□ -1.88
POLE3Q9NRF9 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.31□□□□□ -1.88
POLE3Q9NRF9 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
POLE3Q9NRF9 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
POLE3Q9NRF9 DEFB130C-202ENST00000530001 230 ntBASIC3.31□□□□□ -1.88
POLE3Q9NRF9 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
POLE3Q9NRF9 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
POLE3Q9NRF9 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.31□□□□□ -1.88
POLE3Q9NRF9 AC125611.1-201ENST00000549563 229 ntBASIC3.31□□□□□ -1.88
POLE3Q9NRF9 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.31□□□□□ -1.88
POLE3Q9NRF9 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.31□□□□□ -1.88
POLE3Q9NRF9 BNIP3P5-201ENST00000562290 498 ntBASIC3.31□□□□□ -1.88
POLE3Q9NRF9 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.31□□□□□ -1.88
POLE3Q9NRF9 AC020914.6-201ENST00000594327 272 ntBASIC3.31□□□□□ -1.88
POLE3Q9NRF9 BNIP3P38-201ENST00000601117 544 ntBASIC3.31□□□□□ -1.88
POLE3Q9NRF9 AC019176.2-201ENST00000611579 315 ntBASIC3.31□□□□□ -1.88
POLE3Q9NRF9 AC005332.6-201ENST00000613178 446 ntBASIC3.31□□□□□ -1.88
POLE3Q9NRF9 MIR6810-201ENST00000622701 70 ntBASIC3.31□□□□□ -1.88
POLE3Q9NRF9 AP003476.1-201ENST00000623984 516 ntBASIC3.31□□□□□ -1.88
POLE3Q9NRF9 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.31□□□□□ -1.88
POLE3Q9NRF9 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
POLE3Q9NRF9 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.31□□□□□ -1.88
POLE3Q9NRF9 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
POLE3Q9NRF9 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
POLE3Q9NRF9 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
POLE3Q9NRF9 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
POLE3Q9NRF9 AC107982.1-201ENST00000507171 1300 ntBASIC3.3□□□□□ -1.88
POLE3Q9NRF9 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
POLE3Q9NRF9 RN7SKP280-201ENST00000364196 304 ntBASIC3.3□□□□□ -1.88
POLE3Q9NRF9 OR6K3-202ENST00000368146 996 ntBASIC3.3□□□□□ -1.88
POLE3Q9NRF9 DYNLT3P1-201ENST00000378574 347 ntBASIC3.3□□□□□ -1.88
POLE3Q9NRF9 SNORA1.3-201ENST00000384676 136 ntBASIC3.3□□□□□ -1.88
POLE3Q9NRF9 RNU2-42P-201ENST00000410697 113 ntBASIC3.3□□□□□ -1.88
POLE3Q9NRF9 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.3□□□□□ -1.88
POLE3Q9NRF9 AC068533.1-201ENST00000418542 415 ntBASIC3.3□□□□□ -1.88
POLE3Q9NRF9 PTP4A1P7-201ENST00000423476 514 ntBASIC3.3□□□□□ -1.88
POLE3Q9NRF9 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
POLE3Q9NRF9 EZH2P1-201ENST00000431167 291 ntBASIC3.3□□□□□ -1.88
POLE3Q9NRF9 AC091390.1-201ENST00000433904 331 ntBASIC3.3□□□□□ -1.88
POLE3Q9NRF9 AC005297.2-201ENST00000450430 606 ntBASIC3.3□□□□□ -1.88
POLE3Q9NRF9 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC3.3□□□□□ -1.88
POLE3Q9NRF9 SUMO2P2-201ENST00000456482 255 ntBASIC3.3□□□□□ -1.88
POLE3Q9NRF9 AC108860.1-201ENST00000484521 383 ntBASIC3.3□□□□□ -1.88
POLE3Q9NRF9 AC023424.2-201ENST00000493479 777 ntBASIC3.3□□□□□ -1.88
POLE3Q9NRF9 AC008427.1-201ENST00000503102 655 ntBASIC3.3□□□□□ -1.88
POLE3Q9NRF9 VN1R104P-201ENST00000505115 1009 ntBASIC3.3□□□□□ -1.88
POLE3Q9NRF9 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.3□□□□□ -1.88
POLE3Q9NRF9 AC111000.2-201ENST00000507775 550 ntBASIC3.3□□□□□ -1.88
POLE3Q9NRF9 PRELID3BP5-201ENST00000508612 460 ntBASIC3.3□□□□□ -1.88
POLE3Q9NRF9 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.3□□□□□ -1.88
POLE3Q9NRF9 AC112198.4-201ENST00000515450 351 ntBASIC3.3□□□□□ -1.88
POLE3Q9NRF9 SNORA70.16-201ENST00000516390 95 ntBASIC3.3□□□□□ -1.88
POLE3Q9NRF9 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.3□□□□□ -1.88
POLE3Q9NRF9 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.3□□□□□ -1.88
POLE3Q9NRF9 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.3□□□□□ -1.88
POLE3Q9NRF9 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.3□□□□□ -1.88
POLE3Q9NRF9 AC084824.1-201ENST00000550917 1005 ntBASIC3.3□□□□□ -1.88
POLE3Q9NRF9 DUXAP6-201ENST00000553858 601 ntBASIC3.3□□□□□ -1.88
POLE3Q9NRF9 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.3□□□□□ -1.88
POLE3Q9NRF9 MAGOH2P-202ENST00000584384 429 ntBASIC3.3□□□□□ -1.88
POLE3Q9NRF9 AC013444.2-201ENST00000603317 787 ntBASIC3.3□□□□□ -1.88
POLE3Q9NRF9 AC092354.2-201ENST00000607786 514 ntBASIC3.3□□□□□ -1.88
POLE3Q9NRF9 AC097504.2-201ENST00000608088 454 ntBASIC3.3□□□□□ -1.88
POLE3Q9NRF9 AC024941.1-201ENST00000612250 334 ntBASIC3.3□□□□□ -1.88
POLE3Q9NRF9 AC004009.2-201ENST00000623016 728 ntBASIC3.3□□□□□ -1.88
POLE3Q9NRF9 AC110801.1-201ENST00000623590 212 ntBASIC3.3□□□□□ -1.88
POLE3Q9NRF9 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.3□□□□□ -1.88
POLE3Q9NRF9 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
POLE3Q9NRF9 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
POLE3Q9NRF9 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
POLE3Q9NRF9 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 155.8 ms