Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 AC025946.2-201ENST00000603398 234 ntBASIC4.19□□□□□ -1.74
DDX4Q9NQI0 Z99497.2-201ENST00000603634 310 ntBASIC4.19□□□□□ -1.74
DDX4Q9NQI0 AC069304.2-201ENST00000605154 435 ntBASIC4.19□□□□□ -1.74
DDX4Q9NQI0 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.19□□□□□ -1.74
DDX4Q9NQI0 MIR7851-201ENST00000610611 160 ntBASIC4.19□□□□□ -1.74
DDX4Q9NQI0 AL136981.2-201ENST00000617319 734 ntBASIC4.19□□□□□ -1.74
DDX4Q9NQI0 AC009039.2-201ENST00000624524 529 ntBASIC4.19□□□□□ -1.74
DDX4Q9NQI0 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC4.19□□□□□ -1.74
DDX4Q9NQI0 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC4.19□□□□□ -1.74
DDX4Q9NQI0 AC007671.2-201ENST00000637344 619 ntBASIC4.19□□□□□ -1.74
DDX4Q9NQI0 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
DDX4Q9NQI0 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.19□□□□□ -1.74
DDX4Q9NQI0 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
DDX4Q9NQI0 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
DDX4Q9NQI0 DCAF13P1-201ENST00000495256 1330 ntBASIC4.19□□□□□ -1.74
DDX4Q9NQI0 MTND5P28-201ENST00000438005 1594 ntBASIC4.19□□□□□ -1.74
DDX4Q9NQI0 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
DDX4Q9NQI0 MTND4P34-201ENST00000572715 1371 ntBASIC4.18□□□□□ -1.74
DDX4Q9NQI0 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.18□□□□□ -1.74
DDX4Q9NQI0 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
DDX4Q9NQI0 AL365338.1-201ENST00000422282 858 ntBASIC4.18□□□□□ -1.74
DDX4Q9NQI0 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.18□□□□□ -1.74
DDX4Q9NQI0 RPS25P9-201ENST00000435591 252 ntBASIC4.18□□□□□ -1.74
DDX4Q9NQI0 AC005019.1-201ENST00000436455 431 ntBASIC4.18□□□□□ -1.74
DDX4Q9NQI0 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.18□□□□□ -1.74
DDX4Q9NQI0 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
DDX4Q9NQI0 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC4.18□□□□□ -1.74
DDX4Q9NQI0 AL591503.2-201ENST00000442314 1005 ntBASIC4.18□□□□□ -1.74
DDX4Q9NQI0 SLC31A1P1-201ENST00000451221 567 ntBASIC4.18□□□□□ -1.74
DDX4Q9NQI0 RPS20P32-201ENST00000456044 356 ntBASIC4.18□□□□□ -1.74
DDX4Q9NQI0 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC4.18□□□□□ -1.74
DDX4Q9NQI0 AC010301.1-201ENST00000473936 355 ntBASIC4.18□□□□□ -1.74
DDX4Q9NQI0 AC087385.1-201ENST00000475062 312 ntBASIC4.18□□□□□ -1.74
DDX4Q9NQI0 NCOR1P1-202ENST00000486162 291 ntBASIC4.18□□□□□ -1.74
DDX4Q9NQI0 NAA50-206ENST00000493454 964 ntTSL 2 BASIC4.18□□□□□ -1.74
DDX4Q9NQI0 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.18□□□□□ -1.74
DDX4Q9NQI0 AC109458.1-201ENST00000508858 316 ntBASIC4.18□□□□□ -1.74
DDX4Q9NQI0 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.18□□□□□ -1.74
DDX4Q9NQI0 OR5AK1P-201ENST00000524837 922 ntBASIC4.18□□□□□ -1.74
DDX4Q9NQI0 AP000790.1-201ENST00000528891 737 ntBASIC4.18□□□□□ -1.74
DDX4Q9NQI0 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.18□□□□□ -1.74
DDX4Q9NQI0 RFPL1S-203ENST00000539579 330 ntBASIC4.18□□□□□ -1.74
DDX4Q9NQI0 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.18□□□□□ -1.74
DDX4Q9NQI0 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC4.18□□□□□ -1.74
DDX4Q9NQI0 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC4.18□□□□□ -1.74
DDX4Q9NQI0 AC008638.3-201ENST00000603341 463 ntBASIC4.18□□□□□ -1.74
DDX4Q9NQI0 AC006270.3-201ENST00000605967 1036 ntBASIC4.18□□□□□ -1.74
DDX4Q9NQI0 AL139418.1-201ENST00000613613 177 ntBASIC4.18□□□□□ -1.74
DDX4Q9NQI0 AC092650.2-201ENST00000619984 902 ntBASIC4.18□□□□□ -1.74
DDX4Q9NQI0 AC098679.5-201ENST00000624394 571 ntBASIC4.18□□□□□ -1.74
DDX4Q9NQI0 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC4.18□□□□□ -1.74
DDX4Q9NQI0 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
DDX4Q9NQI0 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
DDX4Q9NQI0 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
DDX4Q9NQI0 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.18□□□□□ -1.74
DDX4Q9NQI0 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
DDX4Q9NQI0 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
DDX4Q9NQI0 ZNF542P-204ENST00000482727 1305 ntBASIC4.18□□□□□ -1.74
DDX4Q9NQI0 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
DDX4Q9NQI0 OTUD4P1-201ENST00000237841 3067 ntBASIC4.18□□□□□ -1.74
DDX4Q9NQI0 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
DDX4Q9NQI0 SAGE4P-201ENST00000442271 3381 ntBASIC4.17□□□□□ -1.74
DDX4Q9NQI0 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
DDX4Q9NQI0 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
DDX4Q9NQI0 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
DDX4Q9NQI0 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
DDX4Q9NQI0 AL391994.1-201ENST00000254724 282 ntBASIC4.17□□□□□ -1.74
DDX4Q9NQI0 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
DDX4Q9NQI0 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
DDX4Q9NQI0 MIR448-201ENST00000362131 111 ntBASIC4.17□□□□□ -1.74
DDX4Q9NQI0 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
DDX4Q9NQI0 RNU6-441P-201ENST00000384545 106 ntBASIC4.17□□□□□ -1.74
DDX4Q9NQI0 MIR649-201ENST00000384843 97 ntBASIC4.17□□□□□ -1.74
DDX4Q9NQI0 MIR1284-201ENST00000408337 120 ntBASIC4.17□□□□□ -1.74
DDX4Q9NQI0 RNU2-28P-201ENST00000410457 189 ntBASIC4.17□□□□□ -1.74
DDX4Q9NQI0 AL133384.1-201ENST00000412744 351 ntBASIC4.17□□□□□ -1.74
DDX4Q9NQI0 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.17□□□□□ -1.74
DDX4Q9NQI0 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.17□□□□□ -1.74
DDX4Q9NQI0 NUP35P2-201ENST00000416748 943 ntBASIC4.17□□□□□ -1.74
DDX4Q9NQI0 USP9YP26-201ENST00000421008 661 ntBASIC4.17□□□□□ -1.74
DDX4Q9NQI0 AC011233.1-201ENST00000422812 283 ntBASIC4.17□□□□□ -1.74
DDX4Q9NQI0 AL593851.1-201ENST00000426171 157 ntBASIC4.17□□□□□ -1.74
DDX4Q9NQI0 CYCSP32-201ENST00000440548 321 ntBASIC4.17□□□□□ -1.74
DDX4Q9NQI0 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC4.17□□□□□ -1.74
DDX4Q9NQI0 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.17□□□□□ -1.74
DDX4Q9NQI0 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC4.17□□□□□ -1.74
DDX4Q9NQI0 MTCO3P2-201ENST00000457365 171 ntBASIC4.17□□□□□ -1.74
DDX4Q9NQI0 snoU13.24-201ENST00000458998 104 ntBASIC4.17□□□□□ -1.74
DDX4Q9NQI0 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.17□□□□□ -1.74
DDX4Q9NQI0 AC087879.1-201ENST00000474343 374 ntBASIC4.17□□□□□ -1.74
DDX4Q9NQI0 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.17□□□□□ -1.74
DDX4Q9NQI0 AC106872.2-201ENST00000494303 480 ntBASIC4.17□□□□□ -1.74
DDX4Q9NQI0 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC4.17□□□□□ -1.74
DDX4Q9NQI0 HMGB1P28-201ENST00000507778 552 ntBASIC4.17□□□□□ -1.74
DDX4Q9NQI0 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
DDX4Q9NQI0 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
DDX4Q9NQI0 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
DDX4Q9NQI0 RNU2-58P-201ENST00000516403 183 ntBASIC4.17□□□□□ -1.74
DDX4Q9NQI0 RNU6-579P-201ENST00000516879 102 ntBASIC4.17□□□□□ -1.74
DDX4Q9NQI0 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms