Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.2□□□□□ -2.06
CHD8Q9HCK8 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.2□□□□□ -2.06
CHD8Q9HCK8 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.2□□□□□ -2.06
CHD8Q9HCK8 AC007336.1-201ENST00000576365 3828 ntBASIC2.2□□□□□ -2.06
CHD8Q9HCK8 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
CHD8Q9HCK8 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CHD8Q9HCK8 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
CHD8Q9HCK8 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CHD8Q9HCK8 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.19□□□□□ -2.06
CHD8Q9HCK8 RNU4-74P-201ENST00000411280 161 ntBASIC2.19□□□□□ -2.06
CHD8Q9HCK8 AC005005.2-201ENST00000420779 380 ntBASIC2.19□□□□□ -2.06
CHD8Q9HCK8 BX679664.1-201ENST00000434429 253 ntBASIC2.19□□□□□ -2.06
CHD8Q9HCK8 SNRPFP4-201ENST00000456366 242 ntBASIC2.19□□□□□ -2.06
CHD8Q9HCK8 SETP1-201ENST00000556014 845 ntBASIC2.19□□□□□ -2.06
CHD8Q9HCK8 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC2.19□□□□□ -2.06
CHD8Q9HCK8 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.19□□□□□ -2.06
CHD8Q9HCK8 AC006272.2-201ENST00000594725 163 ntBASIC2.19□□□□□ -2.06
CHD8Q9HCK8 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.19□□□□□ -2.06
CHD8Q9HCK8 AL049840.6-202ENST00000603373 279 ntBASIC2.19□□□□□ -2.06
CHD8Q9HCK8 AC131238.1-201ENST00000617135 328 ntBASIC2.19□□□□□ -2.06
CHD8Q9HCK8 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.19□□□□□ -2.06
CHD8Q9HCK8 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.19□□□□□ -2.06
CHD8Q9HCK8 ELL2P4-201ENST00000446870 1376 ntBASIC2.19□□□□□ -2.06
CHD8Q9HCK8 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.19□□□□□ -2.06
CHD8Q9HCK8 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.19□□□□□ -2.06
CHD8Q9HCK8 U3.11-201ENST00000364476 212 ntBASIC2.19□□□□□ -2.06
CHD8Q9HCK8 U8.10-201ENST00000384260 133 ntBASIC2.19□□□□□ -2.06
CHD8Q9HCK8 SNORA11.4-201ENST00000408823 129 ntBASIC2.19□□□□□ -2.06
CHD8Q9HCK8 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC2.19□□□□□ -2.06
CHD8Q9HCK8 AC003989.2-201ENST00000440224 169 ntBASIC2.19□□□□□ -2.06
CHD8Q9HCK8 AC117532.1-201ENST00000514638 323 ntBASIC2.19□□□□□ -2.06
CHD8Q9HCK8 FABP5P12-201ENST00000515543 389 ntBASIC2.19□□□□□ -2.06
CHD8Q9HCK8 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.19□□□□□ -2.06
CHD8Q9HCK8 AC103988.1-201ENST00000566382 2177 ntBASIC2.19□□□□□ -2.06
CHD8Q9HCK8 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
CHD8Q9HCK8 TTC39DP-201ENST00000416781 1688 ntBASIC2.19□□□□□ -2.06
CHD8Q9HCK8 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CHD8Q9HCK8 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
CHD8Q9HCK8 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.18□□□□□ -2.06
CHD8Q9HCK8 SNORA70.7-201ENST00000384159 133 ntBASIC2.18□□□□□ -2.06
CHD8Q9HCK8 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC2.18□□□□□ -2.06
CHD8Q9HCK8 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC2.18□□□□□ -2.06
CHD8Q9HCK8 RNA5SP102-201ENST00000516865 106 ntBASIC2.18□□□□□ -2.06
CHD8Q9HCK8 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
CHD8Q9HCK8 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.18□□□□□ -2.06
CHD8Q9HCK8 MTND5P35-201ENST00000557537 1720 ntBASIC2.18□□□□□ -2.06
CHD8Q9HCK8 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
CHD8Q9HCK8 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.18□□□□□ -2.06
CHD8Q9HCK8 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CHD8Q9HCK8 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.18□□□□□ -2.06
CHD8Q9HCK8 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CHD8Q9HCK8 SNORD56.3-201ENST00000363507 71 ntBASIC2.18□□□□□ -2.06
CHD8Q9HCK8 SNORD114-22-201ENST00000365423 72 ntBASIC2.18□□□□□ -2.06
CHD8Q9HCK8 AL138878.1-201ENST00000405131 347 ntBASIC2.18□□□□□ -2.06
CHD8Q9HCK8 RN7SKP140-201ENST00000411196 284 ntBASIC2.18□□□□□ -2.06
CHD8Q9HCK8 AC244033.1-201ENST00000426826 870 ntBASIC2.18□□□□□ -2.06
CHD8Q9HCK8 RPL23AP22-201ENST00000437556 453 ntBASIC2.18□□□□□ -2.06
CHD8Q9HCK8 HSPE1P28-201ENST00000443139 211 ntBASIC2.18□□□□□ -2.06
CHD8Q9HCK8 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.18□□□□□ -2.06
CHD8Q9HCK8 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.18□□□□□ -2.06
CHD8Q9HCK8 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC2.18□□□□□ -2.06
CHD8Q9HCK8 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CHD8Q9HCK8 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.18□□□□□ -2.06
CHD8Q9HCK8 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
CHD8Q9HCK8 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
CHD8Q9HCK8 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC2.17□□□□□ -2.06
CHD8Q9HCK8 SNORA46-201ENST00000384762 135 ntBASIC2.17□□□□□ -2.06
CHD8Q9HCK8 RNA5SP107-201ENST00000411358 122 ntBASIC2.17□□□□□ -2.06
CHD8Q9HCK8 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.17□□□□□ -2.06
CHD8Q9HCK8 HMGN1P7-201ENST00000491722 313 ntBASIC2.17□□□□□ -2.06
CHD8Q9HCK8 AC019159.1-201ENST00000605094 187 ntBASIC2.17□□□□□ -2.06
CHD8Q9HCK8 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CHD8Q9HCK8 MTND5P28-201ENST00000438005 1594 ntBASIC2.17□□□□□ -2.06
CHD8Q9HCK8 SAGE4P-201ENST00000442271 3381 ntBASIC2.17□□□□□ -2.06
CHD8Q9HCK8 AC138915.3-201ENST00000562908 1389 ntBASIC2.17□□□□□ -2.06
CHD8Q9HCK8 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC2.17□□□□□ -2.06
CHD8Q9HCK8 RPL32P35-201ENST00000415214 394 ntBASIC2.17□□□□□ -2.06
CHD8Q9HCK8 OR4K11P-201ENST00000431829 904 ntBASIC2.17□□□□□ -2.06
CHD8Q9HCK8 AP000942.1-201ENST00000463969 747 ntBASIC2.17□□□□□ -2.06
CHD8Q9HCK8 AC090543.1-201ENST00000492168 485 ntBASIC2.17□□□□□ -2.06
CHD8Q9HCK8 NAMPTP2-201ENST00000505629 1115 ntBASIC2.17□□□□□ -2.06
CHD8Q9HCK8 AC021733.2-201ENST00000518830 497 ntBASIC2.17□□□□□ -2.06
CHD8Q9HCK8 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC2.17□□□□□ -2.06
CHD8Q9HCK8 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.17□□□□□ -2.06
CHD8Q9HCK8 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
CHD8Q9HCK8 AL353746.1-201ENST00000566293 6881 ntBASIC2.17□□□□□ -2.06
CHD8Q9HCK8 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.17□□□□□ -2.06
CHD8Q9HCK8 SNORA41-201ENST00000384675 132 ntBASIC2.16□□□□□ -2.06
CHD8Q9HCK8 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
CHD8Q9HCK8 RPL7P46-201ENST00000425129 740 ntBASIC2.16□□□□□ -2.06
CHD8Q9HCK8 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.16□□□□□ -2.06
CHD8Q9HCK8 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC2.16□□□□□ -2.06
CHD8Q9HCK8 ARL2BPP6-201ENST00000512757 439 ntBASIC2.16□□□□□ -2.06
CHD8Q9HCK8 AC007536.1-201ENST00000533382 349 ntBASIC2.16□□□□□ -2.06
CHD8Q9HCK8 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.16□□□□□ -2.06
CHD8Q9HCK8 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CHD8Q9HCK8 WWP1P1-201ENST00000466609 2769 ntBASIC2.16□□□□□ -2.06
CHD8Q9HCK8 AC000367.1-201ENST00000452711 1766 ntBASIC2.16□□□□□ -2.06
CHD8Q9HCK8 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
CHD8Q9HCK8 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms