Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 MIR23A-201ENST00000385245 73 ntBASIC4.32□□□□□ -1.72
USP29Q9HBJ7 U8.14-201ENST00000390843 143 ntBASIC4.32□□□□□ -1.72
USP29Q9HBJ7 RNA5SP36-201ENST00000410197 133 ntBASIC4.32□□□□□ -1.72
USP29Q9HBJ7 RN7SKP33-201ENST00000410942 340 ntBASIC4.32□□□□□ -1.72
USP29Q9HBJ7 HMGN1P14-201ENST00000412459 517 ntBASIC4.32□□□□□ -1.72
USP29Q9HBJ7 OR8G2P-201ENST00000412796 908 ntBASIC4.32□□□□□ -1.72
USP29Q9HBJ7 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
USP29Q9HBJ7 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.32□□□□□ -1.72
USP29Q9HBJ7 FNDC3CP-201ENST00000420795 1155 ntBASIC4.32□□□□□ -1.72
USP29Q9HBJ7 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.32□□□□□ -1.72
USP29Q9HBJ7 AL391219.1-201ENST00000422570 483 ntBASIC4.32□□□□□ -1.72
USP29Q9HBJ7 RPL23AP38-201ENST00000423801 469 ntBASIC4.32□□□□□ -1.72
USP29Q9HBJ7 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC4.32□□□□□ -1.72
USP29Q9HBJ7 AL356583.2-201ENST00000426536 280 ntBASIC4.32□□□□□ -1.72
USP29Q9HBJ7 NPM1P34-201ENST00000428821 893 ntBASIC4.32□□□□□ -1.72
USP29Q9HBJ7 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.32□□□□□ -1.72
USP29Q9HBJ7 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.32□□□□□ -1.72
USP29Q9HBJ7 ELOCP18-201ENST00000434209 337 ntBASIC4.32□□□□□ -1.72
USP29Q9HBJ7 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC4.32□□□□□ -1.72
USP29Q9HBJ7 RSU1P2-202ENST00000437884 485 ntBASIC4.32□□□□□ -1.72
USP29Q9HBJ7 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.32□□□□□ -1.72
USP29Q9HBJ7 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.32□□□□□ -1.72
USP29Q9HBJ7 AL136126.1-201ENST00000473603 402 ntBASIC4.32□□□□□ -1.72
USP29Q9HBJ7 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.32□□□□□ -1.72
USP29Q9HBJ7 AC017037.1-201ENST00000508460 471 ntBASIC4.32□□□□□ -1.72
USP29Q9HBJ7 AL592156.1-201ENST00000508758 304 ntBASIC4.32□□□□□ -1.72
USP29Q9HBJ7 AC109464.2-201ENST00000510242 943 ntBASIC4.32□□□□□ -1.72
USP29Q9HBJ7 COX6CP8-201ENST00000522620 226 ntBASIC4.32□□□□□ -1.72
USP29Q9HBJ7 AP003392.2-201ENST00000527269 208 ntBASIC4.32□□□□□ -1.72
USP29Q9HBJ7 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC4.32□□□□□ -1.72
USP29Q9HBJ7 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.32□□□□□ -1.72
USP29Q9HBJ7 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.32□□□□□ -1.72
USP29Q9HBJ7 OR6C73P-201ENST00000546432 358 ntBASIC4.32□□□□□ -1.72
USP29Q9HBJ7 AC063950.1-201ENST00000552036 308 ntBASIC4.32□□□□□ -1.72
USP29Q9HBJ7 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.32□□□□□ -1.72
USP29Q9HBJ7 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.32□□□□□ -1.72
USP29Q9HBJ7 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC4.32□□□□□ -1.72
USP29Q9HBJ7 AC009063.1-201ENST00000563342 702 ntBASIC4.32□□□□□ -1.72
USP29Q9HBJ7 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.32□□□□□ -1.72
USP29Q9HBJ7 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
USP29Q9HBJ7 AC006566.1-201ENST00000608943 513 ntBASIC4.32□□□□□ -1.72
USP29Q9HBJ7 AC092794.1-201ENST00000612734 582 ntBASIC4.32□□□□□ -1.72
USP29Q9HBJ7 MIR8059-201ENST00000620427 81 ntBASIC4.32□□□□□ -1.72
USP29Q9HBJ7 MIR7702-201ENST00000621931 59 ntBASIC4.32□□□□□ -1.72
USP29Q9HBJ7 AC095031.1-201ENST00000623685 672 ntBASIC4.32□□□□□ -1.72
USP29Q9HBJ7 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
USP29Q9HBJ7 AC018555.1-201ENST00000567548 1980 ntBASIC4.32□□□□□ -1.72
USP29Q9HBJ7 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
USP29Q9HBJ7 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
USP29Q9HBJ7 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
USP29Q9HBJ7 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
USP29Q9HBJ7 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.32□□□□□ -1.72
USP29Q9HBJ7 Z73965.1-201ENST00000623412 2297 ntBASIC4.32□□□□□ -1.72
USP29Q9HBJ7 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.31□□□□□ -1.72
USP29Q9HBJ7 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
USP29Q9HBJ7 ELL2P4-201ENST00000446870 1376 ntBASIC4.31□□□□□ -1.72
USP29Q9HBJ7 OR11H4-201ENST00000315409 1082 ntBASIC4.31□□□□□ -1.72
USP29Q9HBJ7 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
USP29Q9HBJ7 Y_RNA.6-201ENST00000362350 114 ntBASIC4.31□□□□□ -1.72
USP29Q9HBJ7 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
USP29Q9HBJ7 RNU6-769P-201ENST00000384407 104 ntBASIC4.31□□□□□ -1.72
USP29Q9HBJ7 MIR1305-201ENST00000408300 86 ntBASIC4.31□□□□□ -1.72
USP29Q9HBJ7 MIR1179-201ENST00000408703 91 ntBASIC4.31□□□□□ -1.72
USP29Q9HBJ7 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.31□□□□□ -1.72
USP29Q9HBJ7 RAC1P3-201ENST00000416129 580 ntBASIC4.31□□□□□ -1.72
USP29Q9HBJ7 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
USP29Q9HBJ7 AC104651.1-201ENST00000427559 735 ntBASIC4.31□□□□□ -1.72
USP29Q9HBJ7 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.31□□□□□ -1.72
USP29Q9HBJ7 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
USP29Q9HBJ7 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.31□□□□□ -1.72
USP29Q9HBJ7 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.31□□□□□ -1.72
USP29Q9HBJ7 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.31□□□□□ -1.72
USP29Q9HBJ7 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.31□□□□□ -1.72
USP29Q9HBJ7 RAD23BP3-201ENST00000454157 1152 ntBASIC4.31□□□□□ -1.72
USP29Q9HBJ7 RPL35P6-201ENST00000490024 372 ntBASIC4.31□□□□□ -1.72
USP29Q9HBJ7 AC022447.3-201ENST00000506865 495 ntBASIC4.31□□□□□ -1.72
USP29Q9HBJ7 AC108475.1-201ENST00000507880 950 ntBASIC4.31□□□□□ -1.72
USP29Q9HBJ7 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.31□□□□□ -1.72
USP29Q9HBJ7 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.31□□□□□ -1.72
USP29Q9HBJ7 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.31□□□□□ -1.72
USP29Q9HBJ7 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.31□□□□□ -1.72
USP29Q9HBJ7 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.31□□□□□ -1.72
USP29Q9HBJ7 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.31□□□□□ -1.72
USP29Q9HBJ7 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.31□□□□□ -1.72
USP29Q9HBJ7 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.31□□□□□ -1.72
USP29Q9HBJ7 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.31□□□□□ -1.72
USP29Q9HBJ7 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC4.31□□□□□ -1.72
USP29Q9HBJ7 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.31□□□□□ -1.72
USP29Q9HBJ7 MTATP6P3-201ENST00000581686 676 ntBASIC4.31□□□□□ -1.72
USP29Q9HBJ7 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC4.31□□□□□ -1.72
USP29Q9HBJ7 SEPT7P9-203ENST00000604116 343 ntBASIC4.31□□□□□ -1.72
USP29Q9HBJ7 AC115621.1-201ENST00000604653 858 ntBASIC4.31□□□□□ -1.72
USP29Q9HBJ7 AC012603.1-201ENST00000606424 528 ntBASIC4.31□□□□□ -1.72
USP29Q9HBJ7 AC108747.1-201ENST00000609508 535 ntBASIC4.31□□□□□ -1.72
USP29Q9HBJ7 FAM27D1-201ENST00000612308 341 ntBASIC4.31□□□□□ -1.72
USP29Q9HBJ7 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.31□□□□□ -1.72
USP29Q9HBJ7 AC000123.2-201ENST00000623124 461 ntBASIC4.31□□□□□ -1.72
USP29Q9HBJ7 AC068137.3-201ENST00000639191 341 ntBASIC4.31□□□□□ -1.72
USP29Q9HBJ7 AC073869.6-201ENST00000640656 341 ntBASIC4.31□□□□□ -1.72
USP29Q9HBJ7 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms