Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 BEND7P1-201ENST00000422058 457 ntBASIC4.53□□□□□ -1.68
SEC61A2Q9H9S3 AC018630.2-202ENST00000422992 927 ntBASIC4.53□□□□□ -1.68
SEC61A2Q9H9S3 COX6CP13-201ENST00000428703 226 ntBASIC4.53□□□□□ -1.68
SEC61A2Q9H9S3 AL590233.1-201ENST00000430017 456 ntBASIC4.53□□□□□ -1.68
SEC61A2Q9H9S3 RPS20P5-201ENST00000434808 360 ntBASIC4.53□□□□□ -1.68
SEC61A2Q9H9S3 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.53□□□□□ -1.68
SEC61A2Q9H9S3 AC092647.2-201ENST00000452998 253 ntBASIC4.53□□□□□ -1.68
SEC61A2Q9H9S3 TRBV26-201ENST00000456572 344 ntBASIC4.53□□□□□ -1.68
SEC61A2Q9H9S3 Y_RNA.639-201ENST00000458981 102 ntBASIC4.53□□□□□ -1.68
SEC61A2Q9H9S3 RPS4XP10-201ENST00000465034 731 ntBASIC4.53□□□□□ -1.68
SEC61A2Q9H9S3 PLGLA-201ENST00000465668 449 ntBASIC4.53□□□□□ -1.68
SEC61A2Q9H9S3 GMFBP1-201ENST00000467831 427 ntBASIC4.53□□□□□ -1.68
SEC61A2Q9H9S3 RPL21P99-201ENST00000480369 423 ntBASIC4.53□□□□□ -1.68
SEC61A2Q9H9S3 RPL23AP72-201ENST00000492447 435 ntBASIC4.53□□□□□ -1.68
SEC61A2Q9H9S3 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.53□□□□□ -1.68
SEC61A2Q9H9S3 Y_RNA.711-201ENST00000516993 102 ntBASIC4.53□□□□□ -1.68
SEC61A2Q9H9S3 Y_RNA.718-201ENST00000517110 102 ntBASIC4.53□□□□□ -1.68
SEC61A2Q9H9S3 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.53□□□□□ -1.68
SEC61A2Q9H9S3 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SEC61A2Q9H9S3 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.53□□□□□ -1.68
SEC61A2Q9H9S3 AC060771.1-201ENST00000582031 164 ntBASIC4.53□□□□□ -1.68
SEC61A2Q9H9S3 AC007448.1-201ENST00000582714 234 ntBASIC4.53□□□□□ -1.68
SEC61A2Q9H9S3 POLR3GP2-201ENST00000588366 668 ntBASIC4.53□□□□□ -1.68
SEC61A2Q9H9S3 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4.53□□□□□ -1.68
SEC61A2Q9H9S3 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.53□□□□□ -1.68
SEC61A2Q9H9S3 uc_338.15-201ENST00000615470 191 ntBASIC4.53□□□□□ -1.68
SEC61A2Q9H9S3 AL359757.2-201ENST00000624309 274 ntBASIC4.53□□□□□ -1.68
SEC61A2Q9H9S3 AC138305.3-201ENST00000624988 240 ntBASIC4.53□□□□□ -1.68
SEC61A2Q9H9S3 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
SEC61A2Q9H9S3 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.53□□□□□ -1.68
SEC61A2Q9H9S3 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.53□□□□□ -1.68
SEC61A2Q9H9S3 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
SEC61A2Q9H9S3 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
SEC61A2Q9H9S3 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
SEC61A2Q9H9S3 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC4.53□□□□□ -1.68
SEC61A2Q9H9S3 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.53□□□□□ -1.68
SEC61A2Q9H9S3 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SEC61A2Q9H9S3 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SEC61A2Q9H9S3 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SEC61A2Q9H9S3 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.53□□□□□ -1.68
SEC61A2Q9H9S3 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.69
SEC61A2Q9H9S3 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.52□□□□□ -1.69
SEC61A2Q9H9S3 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.52□□□□□ -1.69
SEC61A2Q9H9S3 MTCO1P12-201ENST00000414273 1543 ntBASIC4.52□□□□□ -1.69
SEC61A2Q9H9S3 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
SEC61A2Q9H9S3 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SEC61A2Q9H9S3 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.52□□□□□ -1.69
SEC61A2Q9H9S3 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
SEC61A2Q9H9S3 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SEC61A2Q9H9S3 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SEC61A2Q9H9S3 SNORA17.1-201ENST00000362945 126 ntBASIC4.52□□□□□ -1.69
SEC61A2Q9H9S3 SNORA2.3-201ENST00000383920 135 ntBASIC4.52□□□□□ -1.69
SEC61A2Q9H9S3 RNU6-1297P-201ENST00000384415 104 ntBASIC4.52□□□□□ -1.69
SEC61A2Q9H9S3 SNORD116-29-201ENST00000384516 83 ntBASIC4.52□□□□□ -1.69
SEC61A2Q9H9S3 U3.36-201ENST00000408418 213 ntBASIC4.52□□□□□ -1.69
SEC61A2Q9H9S3 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.52□□□□□ -1.69
SEC61A2Q9H9S3 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.52□□□□□ -1.69
SEC61A2Q9H9S3 AC137499.1-201ENST00000427602 88 ntBASIC4.52□□□□□ -1.69
SEC61A2Q9H9S3 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.52□□□□□ -1.69
SEC61A2Q9H9S3 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.52□□□□□ -1.69
SEC61A2Q9H9S3 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.52□□□□□ -1.69
SEC61A2Q9H9S3 AC093270.2-201ENST00000486157 792 ntBASIC4.52□□□□□ -1.69
SEC61A2Q9H9S3 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SEC61A2Q9H9S3 AC021146.2-201ENST00000504736 556 ntBASIC4.52□□□□□ -1.69
SEC61A2Q9H9S3 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SEC61A2Q9H9S3 Y_RNA.665-201ENST00000516177 98 ntBASIC4.52□□□□□ -1.69
SEC61A2Q9H9S3 RNU6-273P-201ENST00000516937 96 ntBASIC4.52□□□□□ -1.69
SEC61A2Q9H9S3 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC4.52□□□□□ -1.69
SEC61A2Q9H9S3 RPL7P20-201ENST00000520308 745 ntBASIC4.52□□□□□ -1.69
SEC61A2Q9H9S3 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.52□□□□□ -1.69
SEC61A2Q9H9S3 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.52□□□□□ -1.69
SEC61A2Q9H9S3 NDUFB4P11-201ENST00000560510 395 ntBASIC4.52□□□□□ -1.69
SEC61A2Q9H9S3 AC044860.2-201ENST00000561005 179 ntBASIC4.52□□□□□ -1.69
SEC61A2Q9H9S3 MIR4504-201ENST00000577413 92 ntBASIC4.52□□□□□ -1.69
SEC61A2Q9H9S3 AC006270.2-201ENST00000578523 652 ntBASIC4.52□□□□□ -1.69
SEC61A2Q9H9S3 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.52□□□□□ -1.69
SEC61A2Q9H9S3 UBE2L4-201ENST00000587688 464 ntBASIC4.52□□□□□ -1.69
SEC61A2Q9H9S3 GLUD1P4-201ENST00000590914 418 ntBASIC4.52□□□□□ -1.69
SEC61A2Q9H9S3 AC124303.1-201ENST00000605703 360 ntBASIC4.52□□□□□ -1.69
SEC61A2Q9H9S3 AL121992.2-201ENST00000606262 256 ntBASIC4.52□□□□□ -1.69
SEC61A2Q9H9S3 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC4.52□□□□□ -1.69
SEC61A2Q9H9S3 RPSAP73-201ENST00000614820 330 ntBASIC4.52□□□□□ -1.69
SEC61A2Q9H9S3 AL159972.1-201ENST00000625150 448 ntBASIC4.52□□□□□ -1.69
SEC61A2Q9H9S3 CYP3A51P-201ENST00000633513 256 ntBASIC4.52□□□□□ -1.69
SEC61A2Q9H9S3 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SEC61A2Q9H9S3 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SEC61A2Q9H9S3 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.52□□□□□ -1.69
SEC61A2Q9H9S3 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SEC61A2Q9H9S3 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
SEC61A2Q9H9S3 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
SEC61A2Q9H9S3 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SEC61A2Q9H9S3 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
SEC61A2Q9H9S3 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SEC61A2Q9H9S3 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SEC61A2Q9H9S3 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
SEC61A2Q9H9S3 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SEC61A2Q9H9S3 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
SEC61A2Q9H9S3 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SEC61A2Q9H9S3 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.51□□□□□ -1.69
SEC61A2Q9H9S3 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms