Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
CCSER1Q9C0I3 MTND2P41-201ENST00000637599 773 ntBASIC3.59□□□□□ -1.83
CCSER1Q9C0I3 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CCSER1Q9C0I3 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CCSER1Q9C0I3 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
CCSER1Q9C0I3 AC021755.1-201ENST00000559747 1447 ntBASIC3.59□□□□□ -1.84
CCSER1Q9C0I3 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.84
CCSER1Q9C0I3 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
CCSER1Q9C0I3 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCSER1Q9C0I3 RNA5SP387-201ENST00000364226 106 ntBASIC3.58□□□□□ -1.84
CCSER1Q9C0I3 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
CCSER1Q9C0I3 U3.19-201ENST00000390893 196 ntBASIC3.58□□□□□ -1.84
CCSER1Q9C0I3 EI24P2-201ENST00000397776 1076 ntBASIC3.58□□□□□ -1.84
CCSER1Q9C0I3 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC3.58□□□□□ -1.84
CCSER1Q9C0I3 HMGB3P23-201ENST00000414981 585 ntBASIC3.58□□□□□ -1.84
CCSER1Q9C0I3 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.58□□□□□ -1.84
CCSER1Q9C0I3 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.58□□□□□ -1.84
CCSER1Q9C0I3 AC125238.1-201ENST00000448842 249 ntBASIC3.58□□□□□ -1.84
CCSER1Q9C0I3 RPL7P52-201ENST00000449200 742 ntBASIC3.58□□□□□ -1.84
CCSER1Q9C0I3 BTF3P5-201ENST00000457252 467 ntBASIC3.58□□□□□ -1.84
CCSER1Q9C0I3 VPS26AP1-201ENST00000483197 979 ntBASIC3.58□□□□□ -1.84
CCSER1Q9C0I3 CAB39P1-201ENST00000502277 460 ntBASIC3.58□□□□□ -1.84
CCSER1Q9C0I3 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.58□□□□□ -1.84
CCSER1Q9C0I3 SNORA31.20-201ENST00000517111 133 ntBASIC3.58□□□□□ -1.84
CCSER1Q9C0I3 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.58□□□□□ -1.84
CCSER1Q9C0I3 AC087894.1-201ENST00000538359 518 ntBASIC3.58□□□□□ -1.84
CCSER1Q9C0I3 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC3.58□□□□□ -1.84
CCSER1Q9C0I3 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.58□□□□□ -1.84
CCSER1Q9C0I3 CYB5AP5-201ENST00000549779 389 ntBASIC3.58□□□□□ -1.84
CCSER1Q9C0I3 AL121603.1-201ENST00000553815 142 ntBASIC3.58□□□□□ -1.84
CCSER1Q9C0I3 SNORD39.3-201ENST00000584451 71 ntBASIC3.58□□□□□ -1.84
CCSER1Q9C0I3 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.58□□□□□ -1.84
CCSER1Q9C0I3 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.58□□□□□ -1.84
CCSER1Q9C0I3 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCSER1Q9C0I3 RPAP2P1-201ENST00000603626 1168 ntBASIC3.58□□□□□ -1.84
CCSER1Q9C0I3 VIS1.1-201ENST00000610517 203 ntBASIC3.58□□□□□ -1.84
CCSER1Q9C0I3 AC109454.4-201ENST00000623411 649 ntBASIC3.58□□□□□ -1.84
CCSER1Q9C0I3 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.58□□□□□ -1.84
CCSER1Q9C0I3 AC106858.1-201ENST00000637497 429 ntBASIC3.58□□□□□ -1.84
CCSER1Q9C0I3 AC092326.2-201ENST00000624772 1561 ntBASIC3.58□□□□□ -1.84
CCSER1Q9C0I3 MTND5P24-201ENST00000438892 1767 ntBASIC3.58□□□□□ -1.84
CCSER1Q9C0I3 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.58□□□□□ -1.84
CCSER1Q9C0I3 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCSER1Q9C0I3 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CCSER1Q9C0I3 RNA5SP258-201ENST00000362750 119 ntBASIC3.57□□□□□ -1.84
CCSER1Q9C0I3 RNU5B-1-201ENST00000363286 116 ntBASIC3.57□□□□□ -1.84
CCSER1Q9C0I3 RNU6-839P-201ENST00000363347 108 ntBASIC3.57□□□□□ -1.84
CCSER1Q9C0I3 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.57□□□□□ -1.84
CCSER1Q9C0I3 RNU6-730P-201ENST00000383954 104 ntBASIC3.57□□□□□ -1.84
CCSER1Q9C0I3 SNORA9-201ENST00000384215 133 ntBASIC3.57□□□□□ -1.84
CCSER1Q9C0I3 SNORD116-23-201ENST00000384645 92 ntBASIC3.57□□□□□ -1.84
CCSER1Q9C0I3 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CCSER1Q9C0I3 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.57□□□□□ -1.84
CCSER1Q9C0I3 RNA5SP129-201ENST00000410276 118 ntBASIC3.57□□□□□ -1.84
CCSER1Q9C0I3 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.57□□□□□ -1.84
CCSER1Q9C0I3 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC3.57□□□□□ -1.84
CCSER1Q9C0I3 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.57□□□□□ -1.84
CCSER1Q9C0I3 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.57□□□□□ -1.84
CCSER1Q9C0I3 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.57□□□□□ -1.84
CCSER1Q9C0I3 RPS12P18-201ENST00000442381 270 ntBASIC3.57□□□□□ -1.84
CCSER1Q9C0I3 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.57□□□□□ -1.84
CCSER1Q9C0I3 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.57□□□□□ -1.84
CCSER1Q9C0I3 KLRA1P-201ENST00000503499 986 ntBASIC3.57□□□□□ -1.84
CCSER1Q9C0I3 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.57□□□□□ -1.84
CCSER1Q9C0I3 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCSER1Q9C0I3 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.57□□□□□ -1.84
CCSER1Q9C0I3 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.57□□□□□ -1.84
CCSER1Q9C0I3 RNA5SP468-201ENST00000516782 93 ntBASIC3.57□□□□□ -1.84
CCSER1Q9C0I3 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.57□□□□□ -1.84
CCSER1Q9C0I3 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CCSER1Q9C0I3 AC093331.1-201ENST00000521474 169 ntBASIC3.57□□□□□ -1.84
CCSER1Q9C0I3 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.57□□□□□ -1.84
CCSER1Q9C0I3 MTCYBP27-201ENST00000555160 670 ntBASIC3.57□□□□□ -1.84
CCSER1Q9C0I3 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.57□□□□□ -1.84
CCSER1Q9C0I3 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.57□□□□□ -1.84
CCSER1Q9C0I3 MIR5195-201ENST00000583555 115 ntBASIC3.57□□□□□ -1.84
CCSER1Q9C0I3 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.57□□□□□ -1.84
CCSER1Q9C0I3 DNAJC19P3-201ENST00000594491 331 ntBASIC3.57□□□□□ -1.84
CCSER1Q9C0I3 AL591516.1-201ENST00000611326 274 ntBASIC3.57□□□□□ -1.84
CCSER1Q9C0I3 MIR7112-201ENST00000616126 65 ntBASIC3.57□□□□□ -1.84
CCSER1Q9C0I3 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CCSER1Q9C0I3 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.57□□□□□ -1.84
CCSER1Q9C0I3 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.57□□□□□ -1.84
CCSER1Q9C0I3 AC006927.2-201ENST00000639256 389 ntBASIC3.57□□□□□ -1.84
CCSER1Q9C0I3 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
CCSER1Q9C0I3 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CCSER1Q9C0I3 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCSER1Q9C0I3 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.57□□□□□ -1.84
CCSER1Q9C0I3 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
CCSER1Q9C0I3 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.56□□□□□ -1.84
CCSER1Q9C0I3 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.56□□□□□ -1.84
CCSER1Q9C0I3 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.56□□□□□ -1.84
CCSER1Q9C0I3 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.56□□□□□ -1.84
CCSER1Q9C0I3 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CCSER1Q9C0I3 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC3.56□□□□□ -1.84
CCSER1Q9C0I3 MTND4P34-201ENST00000572715 1371 ntBASIC3.56□□□□□ -1.84
CCSER1Q9C0I3 HMGB1P5-201ENST00000255320 642 ntBASIC3.56□□□□□ -1.84
CCSER1Q9C0I3 RNU6-582P-201ENST00000362989 107 ntBASIC3.56□□□□□ -1.84
CCSER1Q9C0I3 RNU6-251P-201ENST00000363235 104 ntBASIC3.56□□□□□ -1.84
CCSER1Q9C0I3 RNU6-629P-201ENST00000384061 103 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms