Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.21□□□□□ -1.58
FOXP3Q9BZS1 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.21□□□□□ -1.58
FOXP3Q9BZS1 AP005432.2-201ENST00000608162 586 ntBASIC5.21□□□□□ -1.58
FOXP3Q9BZS1 AC090971.5-201ENST00000621102 293 ntBASIC5.21□□□□□ -1.58
FOXP3Q9BZS1 AP002799.1-201ENST00000623552 423 ntBASIC5.21□□□□□ -1.58
FOXP3Q9BZS1 AP001784.1-201ENST00000624107 428 ntBASIC5.21□□□□□ -1.58
FOXP3Q9BZS1 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.21□□□□□ -1.58
FOXP3Q9BZS1 CYP3A51P-201ENST00000633513 256 ntBASIC5.21□□□□□ -1.58
FOXP3Q9BZS1 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
FOXP3Q9BZS1 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
FOXP3Q9BZS1 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.21□□□□□ -1.58
FOXP3Q9BZS1 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
FOXP3Q9BZS1 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
FOXP3Q9BZS1 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
FOXP3Q9BZS1 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
FOXP3Q9BZS1 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
FOXP3Q9BZS1 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
FOXP3Q9BZS1 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
FOXP3Q9BZS1 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
FOXP3Q9BZS1 SNORA63C-201ENST00000364578 129 ntBASIC5.2□□□□□ -1.58
FOXP3Q9BZS1 SNORA75.4-201ENST00000391278 119 ntBASIC5.2□□□□□ -1.58
FOXP3Q9BZS1 AP000580.1-201ENST00000404439 358 ntBASIC5.2□□□□□ -1.58
FOXP3Q9BZS1 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.2□□□□□ -1.58
FOXP3Q9BZS1 MIR1182-201ENST00000408363 97 ntBASIC5.2□□□□□ -1.58
FOXP3Q9BZS1 RN7SKP126-201ENST00000411143 300 ntBASIC5.2□□□□□ -1.58
FOXP3Q9BZS1 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.2□□□□□ -1.58
FOXP3Q9BZS1 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC5.2□□□□□ -1.58
FOXP3Q9BZS1 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.2□□□□□ -1.58
FOXP3Q9BZS1 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.2□□□□□ -1.58
FOXP3Q9BZS1 CEACAMP9-201ENST00000442990 513 ntBASIC5.2□□□□□ -1.58
FOXP3Q9BZS1 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.2□□□□□ -1.58
FOXP3Q9BZS1 AC073415.1-201ENST00000449240 153 ntBASIC5.2□□□□□ -1.58
FOXP3Q9BZS1 AL445433.1-201ENST00000457507 257 ntBASIC5.2□□□□□ -1.58
FOXP3Q9BZS1 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC5.2□□□□□ -1.58
FOXP3Q9BZS1 HSPD1P15-201ENST00000505573 1122 ntBASIC5.2□□□□□ -1.58
FOXP3Q9BZS1 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.2□□□□□ -1.58
FOXP3Q9BZS1 AC018442.3-201ENST00000523025 183 ntBASIC5.2□□□□□ -1.58
FOXP3Q9BZS1 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.2□□□□□ -1.58
FOXP3Q9BZS1 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
FOXP3Q9BZS1 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC5.2□□□□□ -1.58
FOXP3Q9BZS1 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.2□□□□□ -1.58
FOXP3Q9BZS1 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.2□□□□□ -1.58
FOXP3Q9BZS1 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
FOXP3Q9BZS1 MIR3171-201ENST00000584270 74 ntBASIC5.2□□□□□ -1.58
FOXP3Q9BZS1 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC5.2□□□□□ -1.58
FOXP3Q9BZS1 AC006504.6-201ENST00000590142 199 ntBASIC5.2□□□□□ -1.58
FOXP3Q9BZS1 AL355802.3-201ENST00000607571 545 ntBASIC5.2□□□□□ -1.58
FOXP3Q9BZS1 AL049539.1-201ENST00000611964 459 ntBASIC5.2□□□□□ -1.58
FOXP3Q9BZS1 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC5.2□□□□□ -1.58
FOXP3Q9BZS1 AC008121.3-201ENST00000618726 433 ntBASIC5.2□□□□□ -1.58
FOXP3Q9BZS1 AC079597.1-201ENST00000624306 508 ntBASIC5.2□□□□□ -1.58
FOXP3Q9BZS1 ATM-228ENST00000639240 498 ntTSL 5 BASIC5.2□□□□□ -1.58
FOXP3Q9BZS1 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.2□□□□□ -1.58
FOXP3Q9BZS1 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.2□□□□□ -1.58
FOXP3Q9BZS1 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
FOXP3Q9BZS1 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
FOXP3Q9BZS1 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
FOXP3Q9BZS1 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
FOXP3Q9BZS1 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.19□□□□□ -1.58
FOXP3Q9BZS1 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.19□□□□□ -1.58
FOXP3Q9BZS1 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
FOXP3Q9BZS1 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
FOXP3Q9BZS1 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.58
FOXP3Q9BZS1 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
FOXP3Q9BZS1 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
FOXP3Q9BZS1 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
FOXP3Q9BZS1 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
FOXP3Q9BZS1 AL118496.1-201ENST00000440201 1812 ntBASIC5.19□□□□□ -1.58
FOXP3Q9BZS1 Y_RNA.128-201ENST00000363391 112 ntBASIC5.19□□□□□ -1.58
FOXP3Q9BZS1 CD3D-202ENST00000392884 476 ntTSL 2 BASIC5.19□□□□□ -1.58
FOXP3Q9BZS1 NDUFB4P5-201ENST00000415445 361 ntBASIC5.19□□□□□ -1.58
FOXP3Q9BZS1 RPL26P29-201ENST00000415623 438 ntBASIC5.19□□□□□ -1.58
FOXP3Q9BZS1 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.19□□□□□ -1.58
FOXP3Q9BZS1 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.19□□□□□ -1.58
FOXP3Q9BZS1 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC5.19□□□□□ -1.58
FOXP3Q9BZS1 AC093655.2-201ENST00000425735 631 ntBASIC5.19□□□□□ -1.58
FOXP3Q9BZS1 AL356276.2-201ENST00000435919 558 ntBASIC5.19□□□□□ -1.58
FOXP3Q9BZS1 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.19□□□□□ -1.58
FOXP3Q9BZS1 HMGB1P15-201ENST00000453854 435 ntBASIC5.19□□□□□ -1.58
FOXP3Q9BZS1 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.19□□□□□ -1.58
FOXP3Q9BZS1 RN7SL443P-201ENST00000464331 290 ntBASIC5.19□□□□□ -1.58
FOXP3Q9BZS1 GMFBP1-201ENST00000467831 427 ntBASIC5.19□□□□□ -1.58
FOXP3Q9BZS1 AC055855.1-201ENST00000489563 579 ntBASIC5.19□□□□□ -1.58
FOXP3Q9BZS1 AC005726.1-201ENST00000494679 427 ntBASIC5.19□□□□□ -1.58
FOXP3Q9BZS1 SNORD27.1-201ENST00000516319 72 ntBASIC5.19□□□□□ -1.58
FOXP3Q9BZS1 CDH12P4-201ENST00000517835 295 ntBASIC5.19□□□□□ -1.58
FOXP3Q9BZS1 CDH12P3-201ENST00000517935 295 ntBASIC5.19□□□□□ -1.58
FOXP3Q9BZS1 CDH12P1-201ENST00000518435 295 ntBASIC5.19□□□□□ -1.58
FOXP3Q9BZS1 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.19□□□□□ -1.58
FOXP3Q9BZS1 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC5.19□□□□□ -1.58
FOXP3Q9BZS1 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
FOXP3Q9BZS1 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC5.19□□□□□ -1.58
FOXP3Q9BZS1 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC5.19□□□□□ -1.58
FOXP3Q9BZS1 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC5.19□□□□□ -1.58
FOXP3Q9BZS1 UBE2L4-201ENST00000587688 464 ntBASIC5.19□□□□□ -1.58
FOXP3Q9BZS1 AC009318.4-201ENST00000620496 486 ntBASIC5.19□□□□□ -1.58
FOXP3Q9BZS1 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
FOXP3Q9BZS1 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.19□□□□□ -1.58
FOXP3Q9BZS1 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
FOXP3Q9BZS1 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms