Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 MIR7843-201ENST00000622274 79 ntBASIC3.3□□□□□ -1.88
UPF3BQ9BZI7 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.3□□□□□ -1.88
UPF3BQ9BZI7 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
UPF3BQ9BZI7 LRRC77P-213ENST00000637727 880 ntBASIC3.3□□□□□ -1.88
UPF3BQ9BZI7 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
UPF3BQ9BZI7 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.29□□□□□ -1.88
UPF3BQ9BZI7 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
UPF3BQ9BZI7 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.29□□□□□ -1.88
UPF3BQ9BZI7 RNU6-891P-201ENST00000384280 111 ntBASIC3.29□□□□□ -1.88
UPF3BQ9BZI7 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
UPF3BQ9BZI7 NUP35P1-201ENST00000422734 947 ntBASIC3.29□□□□□ -1.88
UPF3BQ9BZI7 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.29□□□□□ -1.88
UPF3BQ9BZI7 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.29□□□□□ -1.88
UPF3BQ9BZI7 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.29□□□□□ -1.88
UPF3BQ9BZI7 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.29□□□□□ -1.88
UPF3BQ9BZI7 Z85994.2-201ENST00000434327 452 ntBASIC3.29□□□□□ -1.88
UPF3BQ9BZI7 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.29□□□□□ -1.88
UPF3BQ9BZI7 AC105272.1-201ENST00000438604 198 ntBASIC3.29□□□□□ -1.88
UPF3BQ9BZI7 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.29□□□□□ -1.88
UPF3BQ9BZI7 RPL7P52-201ENST00000449200 742 ntBASIC3.29□□□□□ -1.88
UPF3BQ9BZI7 RN7SL297P-201ENST00000483161 293 ntBASIC3.29□□□□□ -1.88
UPF3BQ9BZI7 HMGB1P38-201ENST00000490557 577 ntBASIC3.29□□□□□ -1.88
UPF3BQ9BZI7 AC114781.4-201ENST00000513707 639 ntBASIC3.29□□□□□ -1.88
UPF3BQ9BZI7 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.29□□□□□ -1.88
UPF3BQ9BZI7 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.29□□□□□ -1.88
UPF3BQ9BZI7 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.29□□□□□ -1.88
UPF3BQ9BZI7 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.29□□□□□ -1.88
UPF3BQ9BZI7 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.29□□□□□ -1.88
UPF3BQ9BZI7 MIR3605-201ENST00000583214 100 ntBASIC3.29□□□□□ -1.88
UPF3BQ9BZI7 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
UPF3BQ9BZI7 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.29□□□□□ -1.88
UPF3BQ9BZI7 AL391597.1-201ENST00000618707 694 ntBASIC3.29□□□□□ -1.88
UPF3BQ9BZI7 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
UPF3BQ9BZI7 AC096644.4-201ENST00000563417 2912 ntBASIC3.29□□□□□ -1.88
UPF3BQ9BZI7 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
UPF3BQ9BZI7 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
UPF3BQ9BZI7 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.28□□□□□ -1.88
UPF3BQ9BZI7 AC103988.1-201ENST00000566382 2177 ntBASIC3.28□□□□□ -1.88
UPF3BQ9BZI7 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
UPF3BQ9BZI7 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.28□□□□□ -1.88
UPF3BQ9BZI7 U8.9-201ENST00000365667 134 ntBASIC3.28□□□□□ -1.88
UPF3BQ9BZI7 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
UPF3BQ9BZI7 RNU6-851P-201ENST00000384565 107 ntBASIC3.28□□□□□ -1.88
UPF3BQ9BZI7 NPM1P11-201ENST00000417106 855 ntBASIC3.28□□□□□ -1.88
UPF3BQ9BZI7 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.28□□□□□ -1.88
UPF3BQ9BZI7 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.28□□□□□ -1.88
UPF3BQ9BZI7 RPS24P13-201ENST00000442520 397 ntBASIC3.28□□□□□ -1.88
UPF3BQ9BZI7 FDX1P2-201ENST00000450769 375 ntBASIC3.28□□□□□ -1.88
UPF3BQ9BZI7 AC104308.1-201ENST00000454621 333 ntBASIC3.28□□□□□ -1.88
UPF3BQ9BZI7 MTCO3P35-201ENST00000485582 781 ntBASIC3.28□□□□□ -1.88
UPF3BQ9BZI7 AC111193.1-201ENST00000504097 155 ntBASIC3.28□□□□□ -1.88
UPF3BQ9BZI7 PCNAP1-201ENST00000505363 709 ntBASIC3.28□□□□□ -1.88
UPF3BQ9BZI7 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.28□□□□□ -1.88
UPF3BQ9BZI7 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.28□□□□□ -1.88
UPF3BQ9BZI7 SNORA9.3-201ENST00000516383 129 ntBASIC3.28□□□□□ -1.88
UPF3BQ9BZI7 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.28□□□□□ -1.88
UPF3BQ9BZI7 MTCYBP41-201ENST00000528913 1123 ntBASIC3.28□□□□□ -1.88
UPF3BQ9BZI7 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.28□□□□□ -1.88
UPF3BQ9BZI7 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.28□□□□□ -1.88
UPF3BQ9BZI7 MIR4524B-201ENST00000581569 115 ntBASIC3.28□□□□□ -1.88
UPF3BQ9BZI7 YWHAQP7-201ENST00000603536 658 ntBASIC3.28□□□□□ -1.88
UPF3BQ9BZI7 AC026790.2-201ENST00000606282 430 ntBASIC3.28□□□□□ -1.88
UPF3BQ9BZI7 AP004607.9-201ENST00000618202 316 ntBASIC3.28□□□□□ -1.88
UPF3BQ9BZI7 AC073348.1-201ENST00000623002 331 ntBASIC3.28□□□□□ -1.88
UPF3BQ9BZI7 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.28□□□□□ -1.88
UPF3BQ9BZI7 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.28□□□□□ -1.89
UPF3BQ9BZI7 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
UPF3BQ9BZI7 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.27□□□□□ -1.89
UPF3BQ9BZI7 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.27□□□□□ -1.89
UPF3BQ9BZI7 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
UPF3BQ9BZI7 RNU6-600P-201ENST00000362524 99 ntBASIC3.27□□□□□ -1.89
UPF3BQ9BZI7 MIR504-201ENST00000385065 83 ntBASIC3.27□□□□□ -1.89
UPF3BQ9BZI7 RPL7P10-201ENST00000417407 739 ntBASIC3.27□□□□□ -1.89
UPF3BQ9BZI7 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.27□□□□□ -1.89
UPF3BQ9BZI7 AC063976.3-201ENST00000426849 329 ntBASIC3.27□□□□□ -1.89
UPF3BQ9BZI7 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.27□□□□□ -1.89
UPF3BQ9BZI7 AL590103.1-201ENST00000434488 307 ntBASIC3.27□□□□□ -1.89
UPF3BQ9BZI7 RPS20P5-201ENST00000434808 360 ntBASIC3.27□□□□□ -1.89
UPF3BQ9BZI7 YWHAZP7-201ENST00000436906 631 ntBASIC3.27□□□□□ -1.89
UPF3BQ9BZI7 AC010095.1-201ENST00000443543 144 ntBASIC3.27□□□□□ -1.89
UPF3BQ9BZI7 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.27□□□□□ -1.89
UPF3BQ9BZI7 AL590639.1-201ENST00000456484 337 ntBASIC3.27□□□□□ -1.89
UPF3BQ9BZI7 RPL23AP11-201ENST00000475260 469 ntBASIC3.27□□□□□ -1.89
UPF3BQ9BZI7 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.27□□□□□ -1.89
UPF3BQ9BZI7 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.27□□□□□ -1.89
UPF3BQ9BZI7 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.27□□□□□ -1.89
UPF3BQ9BZI7 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
UPF3BQ9BZI7 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
UPF3BQ9BZI7 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
UPF3BQ9BZI7 AP006437.1-201ENST00000641440 3685 ntBASIC3.26□□□□□ -1.89
UPF3BQ9BZI7 PABPC1P7-201ENST00000413177 1513 ntBASIC3.26□□□□□ -1.89
UPF3BQ9BZI7 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
UPF3BQ9BZI7 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
UPF3BQ9BZI7 SNORA70B-201ENST00000384210 135 ntBASIC3.26□□□□□ -1.89
UPF3BQ9BZI7 AL512633.1-201ENST00000399931 655 ntBASIC3.26□□□□□ -1.89
UPF3BQ9BZI7 AL138880.1-201ENST00000405824 642 ntBASIC3.26□□□□□ -1.89
UPF3BQ9BZI7 RNU4-74P-201ENST00000411280 161 ntBASIC3.26□□□□□ -1.89
UPF3BQ9BZI7 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
UPF3BQ9BZI7 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.26□□□□□ -1.89
UPF3BQ9BZI7 AC104332.2-201ENST00000429959 156 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms