Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 SNORA62.1-201ENST00000364287 154 ntBASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 DEFB109C-201ENST00000382575 264 ntBASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 DEFB109B-201ENST00000382656 264 ntBASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 RNU6-1207P-201ENST00000384343 107 ntBASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 SNORA70-201ENST00000384436 135 ntBASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 Y_RNA.527-201ENST00000384573 102 ntBASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 PRRC2CP1-201ENST00000404428 159 ntBASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 RNU6-954P-201ENST00000411355 107 ntBASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 GPS2P1-201ENST00000411761 986 ntBASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 AC092832.1-201ENST00000422934 400 ntBASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 TIMM9P1-201ENST00000436122 256 ntBASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 AC005297.2-201ENST00000450430 606 ntBASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 AC104634.1-201ENST00000452720 462 ntBASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 NANOGP10-201ENST00000453325 895 ntBASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 Z92846.1-201ENST00000456203 268 ntBASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 CEACAMP4-201ENST00000457676 421 ntBASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 AC005532.2-201ENST00000467154 373 ntBASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 RN7SL727P-201ENST00000482164 296 ntBASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 LIAS-206ENST00000513731 826 ntTSL 5 BASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 SCARNA20.4-201ENST00000516969 131 ntBASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 RNA5SP454-201ENST00000517231 127 ntBASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 MYL12AP1-201ENST00000518490 515 ntBASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 MTND4P7-201ENST00000523876 130 ntBASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 AP005435.4-201ENST00000529514 284 ntBASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 AC103843.2-201ENST00000530523 682 ntBASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 AC024940.3-201ENST00000538551 316 ntBASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 AL359219.2-201ENST00000555184 348 ntBASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 AC044860.2-201ENST00000561005 179 ntBASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 TVP23CP2-201ENST00000571473 623 ntBASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 AC053481.3-201ENST00000577881 843 ntBASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 MIR4424-201ENST00000585257 86 ntBASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 AF038458.1-201ENST00000588406 262 ntBASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 AC073539.2-201ENST00000597113 165 ntBASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 HSPE1P14-201ENST00000605812 302 ntBASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 uc_338.11-201ENST00000619132 160 ntBASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 MIR6719-201ENST00000622428 87 ntBASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 AC134882.1-201ENST00000603738 1676 ntBASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 AC109780.1-201ENST00000451768 1344 ntBASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SSBP3Q9BWW4 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.4□□□□□ -1.7
SSBP3Q9BWW4 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.7
SSBP3Q9BWW4 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
SSBP3Q9BWW4 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.4□□□□□ -1.7
SSBP3Q9BWW4 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
SSBP3Q9BWW4 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SSBP3Q9BWW4 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.4□□□□□ -1.7
SSBP3Q9BWW4 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
SSBP3Q9BWW4 AL139276.1-201ENST00000311910 1001 ntBASIC4.4□□□□□ -1.71
SSBP3Q9BWW4 RPL23P2-201ENST00000320371 421 ntBASIC4.4□□□□□ -1.71
SSBP3Q9BWW4 Y_RNA.5-201ENST00000362334 102 ntBASIC4.4□□□□□ -1.71
SSBP3Q9BWW4 RNU6-379P-201ENST00000363813 104 ntBASIC4.4□□□□□ -1.71
SSBP3Q9BWW4 Y_RNA.364-201ENST00000365532 101 ntBASIC4.4□□□□□ -1.71
SSBP3Q9BWW4 RNY3P13-201ENST00000365542 102 ntBASIC4.4□□□□□ -1.71
SSBP3Q9BWW4 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SSBP3Q9BWW4 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.4□□□□□ -1.71
SSBP3Q9BWW4 RNU6-1040P-201ENST00000383974 107 ntBASIC4.4□□□□□ -1.71
SSBP3Q9BWW4 RNU6-39P-201ENST00000384344 107 ntBASIC4.4□□□□□ -1.71
SSBP3Q9BWW4 RNU6-441P-201ENST00000384545 106 ntBASIC4.4□□□□□ -1.71
SSBP3Q9BWW4 Y_RNA.556-201ENST00000384677 113 ntBASIC4.4□□□□□ -1.71
SSBP3Q9BWW4 MIR558-201ENST00000384920 94 ntBASIC4.4□□□□□ -1.71
SSBP3Q9BWW4 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SSBP3Q9BWW4 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
SSBP3Q9BWW4 AL139397.2-201ENST00000404529 772 ntBASIC4.4□□□□□ -1.71
SSBP3Q9BWW4 DUTP5-201ENST00000406790 469 ntBASIC4.4□□□□□ -1.71
SSBP3Q9BWW4 RN7SKP126-201ENST00000411143 300 ntBASIC4.4□□□□□ -1.71
SSBP3Q9BWW4 DPPA2P3-201ENST00000411853 655 ntBASIC4.4□□□□□ -1.71
SSBP3Q9BWW4 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.4□□□□□ -1.71
SSBP3Q9BWW4 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.4□□□□□ -1.71
SSBP3Q9BWW4 AC068533.1-201ENST00000418542 415 ntBASIC4.4□□□□□ -1.71
SSBP3Q9BWW4 AC018865.2-201ENST00000423631 129 ntBASIC4.4□□□□□ -1.71
SSBP3Q9BWW4 RPL7L1P10-201ENST00000427790 463 ntBASIC4.4□□□□□ -1.71
SSBP3Q9BWW4 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.4□□□□□ -1.71
SSBP3Q9BWW4 SUMO1P3-201ENST00000439961 304 ntBASIC4.4□□□□□ -1.71
SSBP3Q9BWW4 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC4.4□□□□□ -1.71
SSBP3Q9BWW4 AC083899.1-201ENST00000454465 3819 ntBASIC4.4□□□□□ -1.71
SSBP3Q9BWW4 AL389915.2-201ENST00000454576 441 ntBASIC4.4□□□□□ -1.71
SSBP3Q9BWW4 SNRPFP3-201ENST00000457792 225 ntBASIC4.4□□□□□ -1.71
SSBP3Q9BWW4 RN7SL515P-201ENST00000463999 297 ntBASIC4.4□□□□□ -1.71
SSBP3Q9BWW4 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms