Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 RPL21P89-201ENST00000444021 467 ntBASIC3.36□□□□□ -1.87
CCDC28BQ9BUN5 GAPDHP27-201ENST00000447427 1020 ntBASIC3.36□□□□□ -1.87
CCDC28BQ9BUN5 AC008264.1-201ENST00000447612 367 ntBASIC3.36□□□□□ -1.87
CCDC28BQ9BUN5 SLC31A1P1-201ENST00000451221 567 ntBASIC3.36□□□□□ -1.87
CCDC28BQ9BUN5 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.36□□□□□ -1.87
CCDC28BQ9BUN5 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.36□□□□□ -1.87
CCDC28BQ9BUN5 AC093267.1-201ENST00000489176 961 ntBASIC3.36□□□□□ -1.87
CCDC28BQ9BUN5 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.36□□□□□ -1.87
CCDC28BQ9BUN5 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.36□□□□□ -1.87
CCDC28BQ9BUN5 SNORA48.10-201ENST00000516965 160 ntBASIC3.36□□□□□ -1.87
CCDC28BQ9BUN5 AP003461.1-201ENST00000528866 78 ntBASIC3.36□□□□□ -1.87
CCDC28BQ9BUN5 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC28BQ9BUN5 AC055876.1-202ENST00000567053 138 ntBASIC3.36□□□□□ -1.87
CCDC28BQ9BUN5 AC002400.1-201ENST00000569310 726 ntBASIC3.36□□□□□ -1.87
CCDC28BQ9BUN5 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
CCDC28BQ9BUN5 VN1R82P-201ENST00000601481 356 ntBASIC3.36□□□□□ -1.87
CCDC28BQ9BUN5 AC021171.1-201ENST00000603137 706 ntBASIC3.36□□□□□ -1.87
CCDC28BQ9BUN5 AL592221.1-201ENST00000605266 382 ntBASIC3.36□□□□□ -1.87
CCDC28BQ9BUN5 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC28BQ9BUN5 MTND5P28-201ENST00000438005 1594 ntBASIC3.36□□□□□ -1.87
CCDC28BQ9BUN5 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC28BQ9BUN5 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC28BQ9BUN5 FAM91A3P-201ENST00000456826 2544 ntBASIC3.36□□□□□ -1.87
CCDC28BQ9BUN5 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.36□□□□□ -1.87
CCDC28BQ9BUN5 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC28BQ9BUN5 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC28BQ9BUN5 CDR1-202ENST00000625883 1485 ntBASIC3.35□□□□□ -1.87
CCDC28BQ9BUN5 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC28BQ9BUN5 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.35□□□□□ -1.87
CCDC28BQ9BUN5 RNA5SP295-201ENST00000362655 121 ntBASIC3.35□□□□□ -1.87
CCDC28BQ9BUN5 Y_RNA.311-201ENST00000365068 96 ntBASIC3.35□□□□□ -1.87
CCDC28BQ9BUN5 RNY3P9-201ENST00000384727 106 ntBASIC3.35□□□□□ -1.87
CCDC28BQ9BUN5 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.35□□□□□ -1.87
CCDC28BQ9BUN5 MIR887-201ENST00000401258 79 ntBASIC3.35□□□□□ -1.87
CCDC28BQ9BUN5 TANK-203ENST00000402568 878 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC28BQ9BUN5 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.35□□□□□ -1.87
CCDC28BQ9BUN5 BMS1P22-201ENST00000414726 313 ntBASIC3.35□□□□□ -1.87
CCDC28BQ9BUN5 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC28BQ9BUN5 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.35□□□□□ -1.87
CCDC28BQ9BUN5 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC28BQ9BUN5 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.35□□□□□ -1.87
CCDC28BQ9BUN5 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC28BQ9BUN5 CEACAMP9-201ENST00000442990 513 ntBASIC3.35□□□□□ -1.87
CCDC28BQ9BUN5 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC28BQ9BUN5 AC097262.1-201ENST00000452559 548 ntBASIC3.35□□□□□ -1.87
CCDC28BQ9BUN5 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.35□□□□□ -1.87
CCDC28BQ9BUN5 RPL7P18-201ENST00000478965 734 ntBASIC3.35□□□□□ -1.87
CCDC28BQ9BUN5 GAPDHP36-201ENST00000480688 918 ntBASIC3.35□□□□□ -1.87
CCDC28BQ9BUN5 AC104090.1-201ENST00000506341 1171 ntBASIC3.35□□□□□ -1.87
CCDC28BQ9BUN5 AC010460.1-201ENST00000507087 466 ntBASIC3.35□□□□□ -1.87
CCDC28BQ9BUN5 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC28BQ9BUN5 AC110792.2-201ENST00000510278 224 ntBASIC3.35□□□□□ -1.87
CCDC28BQ9BUN5 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC28BQ9BUN5 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC28BQ9BUN5 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC28BQ9BUN5 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.35□□□□□ -1.87
CCDC28BQ9BUN5 AP000790.1-201ENST00000528891 737 ntBASIC3.35□□□□□ -1.87
CCDC28BQ9BUN5 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC28BQ9BUN5 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC28BQ9BUN5 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.35□□□□□ -1.87
CCDC28BQ9BUN5 AC009712.1-201ENST00000564938 316 ntBASIC3.35□□□□□ -1.87
CCDC28BQ9BUN5 AC138915.2-201ENST00000569776 97 ntBASIC3.35□□□□□ -1.87
CCDC28BQ9BUN5 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.35□□□□□ -1.87
CCDC28BQ9BUN5 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC28BQ9BUN5 AL354976.1-201ENST00000613843 387 ntBASIC3.35□□□□□ -1.87
CCDC28BQ9BUN5 AC091304.6-201ENST00000619761 202 ntBASIC3.35□□□□□ -1.87
CCDC28BQ9BUN5 AC007490.1-201ENST00000624321 703 ntBASIC3.35□□□□□ -1.87
CCDC28BQ9BUN5 AC098679.5-201ENST00000624394 571 ntBASIC3.35□□□□□ -1.87
CCDC28BQ9BUN5 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
CCDC28BQ9BUN5 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC28BQ9BUN5 AC007256.1-201ENST00000392253 2765 ntBASIC3.35□□□□□ -1.87
CCDC28BQ9BUN5 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
CCDC28BQ9BUN5 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC28BQ9BUN5 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
CCDC28BQ9BUN5 Y_RNA.25-201ENST00000362528 102 ntBASIC3.34□□□□□ -1.87
CCDC28BQ9BUN5 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC28BQ9BUN5 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
CCDC28BQ9BUN5 RNU6-921P-201ENST00000384361 107 ntBASIC3.34□□□□□ -1.87
CCDC28BQ9BUN5 RNU1-13P-201ENST00000384499 162 ntBASIC3.34□□□□□ -1.87
CCDC28BQ9BUN5 RNU6-441P-201ENST00000384545 106 ntBASIC3.34□□□□□ -1.87
CCDC28BQ9BUN5 RNU2-21P-201ENST00000410368 188 ntBASIC3.34□□□□□ -1.87
CCDC28BQ9BUN5 RPL31P2-201ENST00000413849 377 ntBASIC3.34□□□□□ -1.87
CCDC28BQ9BUN5 NUP35P2-201ENST00000416748 943 ntBASIC3.34□□□□□ -1.87
CCDC28BQ9BUN5 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC28BQ9BUN5 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC28BQ9BUN5 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC3.34□□□□□ -1.87
CCDC28BQ9BUN5 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC28BQ9BUN5 MTND5P25-201ENST00000430499 799 ntBASIC3.34□□□□□ -1.87
CCDC28BQ9BUN5 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
CCDC28BQ9BUN5 YWHAZP7-201ENST00000436906 631 ntBASIC3.34□□□□□ -1.87
CCDC28BQ9BUN5 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC28BQ9BUN5 MTND3P1-201ENST00000441336 220 ntBASIC3.34□□□□□ -1.87
CCDC28BQ9BUN5 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC28BQ9BUN5 AC114755.5-201ENST00000447760 831 ntBASIC3.34□□□□□ -1.87
CCDC28BQ9BUN5 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.34□□□□□ -1.87
CCDC28BQ9BUN5 RPL31P13-201ENST00000484151 370 ntBASIC3.34□□□□□ -1.87
CCDC28BQ9BUN5 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC28BQ9BUN5 HMGB3P15-201ENST00000507326 574 ntBASIC3.34□□□□□ -1.87
CCDC28BQ9BUN5 AC090071.1-201ENST00000507713 644 ntBASIC3.34□□□□□ -1.87
CCDC28BQ9BUN5 AC010587.2-201ENST00000511727 448 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms