Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.51□□□□□ -1.53
TRIM56Q9BRZ2 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM56Q9BRZ2 RPL23AP38-201ENST00000423801 469 ntBASIC5.51□□□□□ -1.53
TRIM56Q9BRZ2 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC5.51□□□□□ -1.53
TRIM56Q9BRZ2 RPL35AP22-201ENST00000436855 335 ntBASIC5.51□□□□□ -1.53
TRIM56Q9BRZ2 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.51□□□□□ -1.53
TRIM56Q9BRZ2 AL450023.1-201ENST00000450868 751 ntBASIC5.51□□□□□ -1.53
TRIM56Q9BRZ2 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC5.51□□□□□ -1.53
TRIM56Q9BRZ2 AC091685.2-201ENST00000454924 864 ntBASIC5.51□□□□□ -1.53
TRIM56Q9BRZ2 snoU109.4-201ENST00000458953 143 ntBASIC5.51□□□□□ -1.53
TRIM56Q9BRZ2 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
TRIM56Q9BRZ2 AL049874.2-201ENST00000492636 288 ntBASIC5.51□□□□□ -1.53
TRIM56Q9BRZ2 AC025164.1-201ENST00000496249 478 ntBASIC5.51□□□□□ -1.53
TRIM56Q9BRZ2 Y_RNA.654-201ENST00000497848 106 ntBASIC5.51□□□□□ -1.53
TRIM56Q9BRZ2 AC006499.3-201ENST00000506077 748 ntBASIC5.51□□□□□ -1.53
TRIM56Q9BRZ2 HMGN1P9-201ENST00000515212 298 ntBASIC5.51□□□□□ -1.53
TRIM56Q9BRZ2 AC027308.1-201ENST00000517993 110 ntBASIC5.51□□□□□ -1.53
TRIM56Q9BRZ2 MYL12AP1-201ENST00000518490 515 ntBASIC5.51□□□□□ -1.53
TRIM56Q9BRZ2 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC5.51□□□□□ -1.53
TRIM56Q9BRZ2 DEFB109D-201ENST00000529497 240 ntBASIC5.51□□□□□ -1.53
TRIM56Q9BRZ2 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.51□□□□□ -1.53
TRIM56Q9BRZ2 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC5.51□□□□□ -1.53
TRIM56Q9BRZ2 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM56Q9BRZ2 MDM2-233ENST00000545204 398 ntTSL 5 BASIC5.51□□□□□ -1.53
TRIM56Q9BRZ2 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM56Q9BRZ2 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC5.51□□□□□ -1.53
TRIM56Q9BRZ2 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC5.51□□□□□ -1.53
TRIM56Q9BRZ2 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.51□□□□□ -1.53
TRIM56Q9BRZ2 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.51□□□□□ -1.53
TRIM56Q9BRZ2 MIR3942-201ENST00000585264 109 ntBASIC5.51□□□□□ -1.53
TRIM56Q9BRZ2 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.51□□□□□ -1.53
TRIM56Q9BRZ2 AC133104.2-201ENST00000615272 193 ntBASIC5.51□□□□□ -1.53
TRIM56Q9BRZ2 AL122125.1-201ENST00000616999 600 ntBASIC5.51□□□□□ -1.53
TRIM56Q9BRZ2 AC087588.2-201ENST00000617667 426 ntBASIC5.51□□□□□ -1.53
TRIM56Q9BRZ2 AP001005.3-201ENST00000622049 129 ntBASIC5.51□□□□□ -1.53
TRIM56Q9BRZ2 AP001784.1-201ENST00000624107 428 ntBASIC5.51□□□□□ -1.53
TRIM56Q9BRZ2 AP000843.1-201ENST00000624880 701 ntBASIC5.51□□□□□ -1.53
TRIM56Q9BRZ2 U6.114-201ENST00000636407 96 ntBASIC5.51□□□□□ -1.53
TRIM56Q9BRZ2 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
TRIM56Q9BRZ2 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM56Q9BRZ2 AL078621.3-201ENST00000623707 2042 ntBASIC5.51□□□□□ -1.53
TRIM56Q9BRZ2 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM56Q9BRZ2 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM56Q9BRZ2 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
TRIM56Q9BRZ2 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM56Q9BRZ2 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.51□□□□□ -1.53
TRIM56Q9BRZ2 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
TRIM56Q9BRZ2 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.5□□□□□ -1.53
TRIM56Q9BRZ2 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM56Q9BRZ2 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
TRIM56Q9BRZ2 AP001284.1-201ENST00000528393 2118 ntBASIC5.5□□□□□ -1.53
TRIM56Q9BRZ2 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM56Q9BRZ2 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM56Q9BRZ2 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM56Q9BRZ2 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC5.5□□□□□ -1.53
TRIM56Q9BRZ2 RNU6-511P-201ENST00000363496 107 ntBASIC5.5□□□□□ -1.53
TRIM56Q9BRZ2 SNORD113-7-201ENST00000363762 77 ntBASIC5.5□□□□□ -1.53
TRIM56Q9BRZ2 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
TRIM56Q9BRZ2 RNU6-1106P-201ENST00000390845 107 ntBASIC5.5□□□□□ -1.53
TRIM56Q9BRZ2 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.5□□□□□ -1.53
TRIM56Q9BRZ2 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.5□□□□□ -1.53
TRIM56Q9BRZ2 AL133173.1-201ENST00000423458 397 ntBASIC5.5□□□□□ -1.53
TRIM56Q9BRZ2 AC113412.1-201ENST00000425840 504 ntBASIC5.5□□□□□ -1.53
TRIM56Q9BRZ2 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.5□□□□□ -1.53
TRIM56Q9BRZ2 RPL7L1P10-201ENST00000427790 463 ntBASIC5.5□□□□□ -1.53
TRIM56Q9BRZ2 OR2AS1P-201ENST00000427827 319 ntBASIC5.5□□□□□ -1.53
TRIM56Q9BRZ2 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM56Q9BRZ2 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.5□□□□□ -1.53
TRIM56Q9BRZ2 AC019185.1-201ENST00000442718 389 ntBASIC5.5□□□□□ -1.53
TRIM56Q9BRZ2 AL137792.2-201ENST00000443484 235 ntBASIC5.5□□□□□ -1.53
TRIM56Q9BRZ2 RPL32P28-201ENST00000443577 397 ntBASIC5.5□□□□□ -1.53
TRIM56Q9BRZ2 AC002553.2-201ENST00000453217 340 ntBASIC5.5□□□□□ -1.53
TRIM56Q9BRZ2 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC5.5□□□□□ -1.53
TRIM56Q9BRZ2 Y_RNA.653-201ENST00000459091 95 ntBASIC5.5□□□□□ -1.53
TRIM56Q9BRZ2 AC079804.1-201ENST00000461922 436 ntBASIC5.5□□□□□ -1.53
TRIM56Q9BRZ2 UBA52P7-201ENST00000486088 380 ntBASIC5.5□□□□□ -1.53
TRIM56Q9BRZ2 AL136038.1-201ENST00000497246 351 ntBASIC5.5□□□□□ -1.53
TRIM56Q9BRZ2 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC5.5□□□□□ -1.53
TRIM56Q9BRZ2 TRBVA-201ENST00000498804 316 ntBASIC5.5□□□□□ -1.53
TRIM56Q9BRZ2 AC017037.1-201ENST00000508460 471 ntBASIC5.5□□□□□ -1.53
TRIM56Q9BRZ2 AC098591.2-201ENST00000510152 315 ntBASIC5.5□□□□□ -1.53
TRIM56Q9BRZ2 RNA5SP228-201ENST00000516232 133 ntBASIC5.5□□□□□ -1.53
TRIM56Q9BRZ2 RNU6-273P-201ENST00000516937 96 ntBASIC5.5□□□□□ -1.53
TRIM56Q9BRZ2 AC009902.1-201ENST00000519351 183 ntBASIC5.5□□□□□ -1.53
TRIM56Q9BRZ2 HMGB1P41-201ENST00000520234 440 ntBASIC5.5□□□□□ -1.53
TRIM56Q9BRZ2 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
TRIM56Q9BRZ2 COPS8P3-201ENST00000526024 482 ntBASIC5.5□□□□□ -1.53
TRIM56Q9BRZ2 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.5□□□□□ -1.53
TRIM56Q9BRZ2 AC007225.2-201ENST00000562529 256 ntBASIC5.5□□□□□ -1.53
TRIM56Q9BRZ2 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC5.5□□□□□ -1.53
TRIM56Q9BRZ2 MIR5690-201ENST00000583739 73 ntBASIC5.5□□□□□ -1.53
TRIM56Q9BRZ2 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.5□□□□□ -1.53
TRIM56Q9BRZ2 AL118522.2-201ENST00000616045 615 ntBASIC5.5□□□□□ -1.53
TRIM56Q9BRZ2 AL049767.1-202ENST00000637826 242 ntBASIC5.5□□□□□ -1.53
TRIM56Q9BRZ2 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
TRIM56Q9BRZ2 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.5□□□□□ -1.53
TRIM56Q9BRZ2 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC5.5□□□□□ -1.53
TRIM56Q9BRZ2 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM56Q9BRZ2 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.5□□□□□ -1.53
TRIM56Q9BRZ2 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms