Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.18□□□□□ -1.74
SNX18Q96RF0 AC004067.1-201ENST00000608733 700 ntBASIC4.18□□□□□ -1.74
SNX18Q96RF0 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.18□□□□□ -1.74
SNX18Q96RF0 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4.18□□□□□ -1.74
SNX18Q96RF0 MLECP1-201ENST00000615893 709 ntBASIC4.18□□□□□ -1.74
SNX18Q96RF0 AL359880.1-201ENST00000621879 266 ntBASIC4.18□□□□□ -1.74
SNX18Q96RF0 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.18□□□□□ -1.74
SNX18Q96RF0 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
SNX18Q96RF0 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SNX18Q96RF0 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SNX18Q96RF0 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
SNX18Q96RF0 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SNX18Q96RF0 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.18□□□□□ -1.74
SNX18Q96RF0 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
SNX18Q96RF0 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
SNX18Q96RF0 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SNX18Q96RF0 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SNX18Q96RF0 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SNX18Q96RF0 MAPK10-253ENST00000641010 4072 ntBASIC4.17□□□□□ -1.74
SNX18Q96RF0 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
SNX18Q96RF0 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SNX18Q96RF0 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.17□□□□□ -1.74
SNX18Q96RF0 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
SNX18Q96RF0 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SNX18Q96RF0 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.17□□□□□ -1.74
SNX18Q96RF0 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
SNX18Q96RF0 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
SNX18Q96RF0 Y_RNA.46-201ENST00000362695 102 ntBASIC4.17□□□□□ -1.74
SNX18Q96RF0 Y_RNA.453-201ENST00000384223 109 ntBASIC4.17□□□□□ -1.74
SNX18Q96RF0 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC4.17□□□□□ -1.74
SNX18Q96RF0 CCDC58P2-201ENST00000417131 366 ntBASIC4.17□□□□□ -1.74
SNX18Q96RF0 SAGE2P-201ENST00000420011 2126 ntBASIC4.17□□□□□ -1.74
SNX18Q96RF0 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.17□□□□□ -1.74
SNX18Q96RF0 MTCYBP24-201ENST00000420387 1106 ntBASIC4.17□□□□□ -1.74
SNX18Q96RF0 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SNX18Q96RF0 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.17□□□□□ -1.74
SNX18Q96RF0 PSMA6P3-201ENST00000428242 164 ntBASIC4.17□□□□□ -1.74
SNX18Q96RF0 AC073464.1-201ENST00000429823 534 ntBASIC4.17□□□□□ -1.74
SNX18Q96RF0 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SNX18Q96RF0 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC4.17□□□□□ -1.74
SNX18Q96RF0 FCF1P1-201ENST00000432690 571 ntBASIC4.17□□□□□ -1.74
SNX18Q96RF0 BTF3P10-201ENST00000433415 495 ntBASIC4.17□□□□□ -1.74
SNX18Q96RF0 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SNX18Q96RF0 AL671855.1-201ENST00000446875 1203 ntBASIC4.17□□□□□ -1.74
SNX18Q96RF0 OR1H1P-201ENST00000448731 937 ntBASIC4.17□□□□□ -1.74
SNX18Q96RF0 AC009220.1-201ENST00000451614 275 ntBASIC4.17□□□□□ -1.74
SNX18Q96RF0 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.17□□□□□ -1.74
SNX18Q96RF0 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.17□□□□□ -1.74
SNX18Q96RF0 RPL38P1-201ENST00000460914 211 ntBASIC4.17□□□□□ -1.74
SNX18Q96RF0 AC022034.3-201ENST00000471393 478 ntBASIC4.17□□□□□ -1.74
SNX18Q96RF0 AC093267.1-201ENST00000489176 961 ntBASIC4.17□□□□□ -1.74
SNX18Q96RF0 FCF1P3-201ENST00000496394 590 ntBASIC4.17□□□□□ -1.74
SNX18Q96RF0 AL592156.1-201ENST00000508758 304 ntBASIC4.17□□□□□ -1.74
SNX18Q96RF0 RN7SKP82-201ENST00000516786 223 ntBASIC4.17□□□□□ -1.74
SNX18Q96RF0 RNU6-714P-201ENST00000516963 103 ntBASIC4.17□□□□□ -1.74
SNX18Q96RF0 AC118273.2-201ENST00000532092 465 ntBASIC4.17□□□□□ -1.74
SNX18Q96RF0 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC4.17□□□□□ -1.74
SNX18Q96RF0 AP006289.1-201ENST00000538089 277 ntBASIC4.17□□□□□ -1.74
SNX18Q96RF0 AC024224.1-201ENST00000538284 609 ntBASIC4.17□□□□□ -1.74
SNX18Q96RF0 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC4.17□□□□□ -1.74
SNX18Q96RF0 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.17□□□□□ -1.74
SNX18Q96RF0 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.17□□□□□ -1.74
SNX18Q96RF0 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.17□□□□□ -1.74
SNX18Q96RF0 AL353997.4-201ENST00000586196 166 ntBASIC4.17□□□□□ -1.74
SNX18Q96RF0 AC006504.3-201ENST00000586818 523 ntBASIC4.17□□□□□ -1.74
SNX18Q96RF0 YWHAQP7-201ENST00000603536 658 ntBASIC4.17□□□□□ -1.74
SNX18Q96RF0 AC007566.2-201ENST00000603642 413 ntBASIC4.17□□□□□ -1.74
SNX18Q96RF0 AC009268.2-201ENST00000621925 457 ntBASIC4.17□□□□□ -1.74
SNX18Q96RF0 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.17□□□□□ -1.74
SNX18Q96RF0 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SNX18Q96RF0 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
SNX18Q96RF0 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.17□□□□□ -1.74
SNX18Q96RF0 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.17□□□□□ -1.74
SNX18Q96RF0 SAGE4P-201ENST00000442271 3381 ntBASIC4.17□□□□□ -1.74
SNX18Q96RF0 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.17□□□□□ -1.74
SNX18Q96RF0 AC018555.1-201ENST00000567548 1980 ntBASIC4.16□□□□□ -1.74
SNX18Q96RF0 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
SNX18Q96RF0 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SNX18Q96RF0 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.16□□□□□ -1.74
SNX18Q96RF0 RNA5SP191-201ENST00000362585 102 ntBASIC4.16□□□□□ -1.74
SNX18Q96RF0 RNVU1-6-201ENST00000364688 164 ntBASIC4.16□□□□□ -1.74
SNX18Q96RF0 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SNX18Q96RF0 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SNX18Q96RF0 ENSAP1-201ENST00000392855 326 ntBASIC4.16□□□□□ -1.74
SNX18Q96RF0 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.16□□□□□ -1.74
SNX18Q96RF0 RPL7P25-201ENST00000404151 721 ntBASIC4.16□□□□□ -1.74
SNX18Q96RF0 RPS16P5-201ENST00000406501 404 ntBASIC4.16□□□□□ -1.74
SNX18Q96RF0 FAR2P2-201ENST00000413041 594 ntBASIC4.16□□□□□ -1.74
SNX18Q96RF0 AL590139.1-201ENST00000416267 400 ntBASIC4.16□□□□□ -1.74
SNX18Q96RF0 RPL36AP36-201ENST00000418616 301 ntBASIC4.16□□□□□ -1.74
SNX18Q96RF0 FAR2P4-202ENST00000425399 584 ntBASIC4.16□□□□□ -1.74
SNX18Q96RF0 ELOCP14-201ENST00000428070 331 ntBASIC4.16□□□□□ -1.74
SNX18Q96RF0 RPL21P91-201ENST00000429231 479 ntBASIC4.16□□□□□ -1.74
SNX18Q96RF0 RPL31P35-201ENST00000431058 377 ntBASIC4.16□□□□□ -1.74
SNX18Q96RF0 ELOCP18-201ENST00000434209 337 ntBASIC4.16□□□□□ -1.74
SNX18Q96RF0 HMGB1P31-201ENST00000437242 427 ntBASIC4.16□□□□□ -1.74
SNX18Q96RF0 ELOCP7-201ENST00000439968 331 ntBASIC4.16□□□□□ -1.74
SNX18Q96RF0 SDCBPP1-201ENST00000440192 890 ntBASIC4.16□□□□□ -1.74
SNX18Q96RF0 RPS4XP4-201ENST00000443195 763 ntBASIC4.16□□□□□ -1.74
SNX18Q96RF0 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms