Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 MTND2P8-201ENST00000450555 1025 ntBASIC2.36□□□□□ -2.03
PCDH15Q96QU1 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC2.36□□□□□ -2.03
PCDH15Q96QU1 RN7SKP282-201ENST00000516824 299 ntBASIC2.36□□□□□ -2.03
PCDH15Q96QU1 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC2.36□□□□□ -2.03
PCDH15Q96QU1 MIR4716-201ENST00000579628 84 ntBASIC2.36□□□□□ -2.03
PCDH15Q96QU1 MIR4512-201ENST00000583257 77 ntBASIC2.36□□□□□ -2.03
PCDH15Q96QU1 Z99129.2-201ENST00000619967 314 ntBASIC2.36□□□□□ -2.03
PCDH15Q96QU1 AC004943.3-201ENST00000624116 600 ntBASIC2.36□□□□□ -2.03
PCDH15Q96QU1 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC2.36□□□□□ -2.03
PCDH15Q96QU1 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
PCDH15Q96QU1 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
PCDH15Q96QU1 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
PCDH15Q96QU1 MTND5P6-201ENST00000422338 1798 ntBASIC2.36□□□□□ -2.03
PCDH15Q96QU1 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
PCDH15Q96QU1 RNU6-76P-201ENST00000384060 104 ntBASIC2.36□□□□□ -2.03
PCDH15Q96QU1 AL096701.2-201ENST00000416920 238 ntBASIC2.36□□□□□ -2.03
PCDH15Q96QU1 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC2.36□□□□□ -2.03
PCDH15Q96QU1 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC2.36□□□□□ -2.03
PCDH15Q96QU1 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC2.36□□□□□ -2.03
PCDH15Q96QU1 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.36□□□□□ -2.03
PCDH15Q96QU1 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC2.36□□□□□ -2.03
PCDH15Q96QU1 RPL23AP44-201ENST00000482216 473 ntBASIC2.36□□□□□ -2.03
PCDH15Q96QU1 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.36□□□□□ -2.03
PCDH15Q96QU1 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC2.36□□□□□ -2.03
PCDH15Q96QU1 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.36□□□□□ -2.03
PCDH15Q96QU1 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.36□□□□□ -2.03
PCDH15Q96QU1 AL590410.1-201ENST00000617925 333 ntBASIC2.36□□□□□ -2.03
PCDH15Q96QU1 AL162233.1-201ENST00000620014 944 ntBASIC2.36□□□□□ -2.03
PCDH15Q96QU1 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC2.36□□□□□ -2.03
PCDH15Q96QU1 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC2.36□□□□□ -2.03
PCDH15Q96QU1 AC099063.3-201ENST00000642066 185 ntBASIC2.36□□□□□ -2.03
PCDH15Q96QU1 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
PCDH15Q96QU1 AL161431.1-201ENST00000618966 4205 ntBASIC2.35□□□□□ -2.03
PCDH15Q96QU1 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.35□□□□□ -2.03
PCDH15Q96QU1 RNU6-253P-201ENST00000384730 105 ntBASIC2.35□□□□□ -2.03
PCDH15Q96QU1 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.35□□□□□ -2.03
PCDH15Q96QU1 RPS3AP26-201ENST00000398259 784 ntBASIC2.35□□□□□ -2.03
PCDH15Q96QU1 RN7SKP140-201ENST00000411196 284 ntBASIC2.35□□□□□ -2.03
PCDH15Q96QU1 RNA5SP498-201ENST00000411342 120 ntBASIC2.35□□□□□ -2.03
PCDH15Q96QU1 RNU6-603P-201ENST00000411403 107 ntBASIC2.35□□□□□ -2.03
PCDH15Q96QU1 RNU2-6P-201ENST00000411404 190 ntBASIC2.35□□□□□ -2.03
PCDH15Q96QU1 SDCBPP3-201ENST00000419629 891 ntBASIC2.35□□□□□ -2.03
PCDH15Q96QU1 TRAPPC2P5-201ENST00000426293 308 ntBASIC2.35□□□□□ -2.03
PCDH15Q96QU1 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC2.35□□□□□ -2.03
PCDH15Q96QU1 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC2.35□□□□□ -2.03
PCDH15Q96QU1 YWHAZP7-201ENST00000436906 631 ntBASIC2.35□□□□□ -2.03
PCDH15Q96QU1 AC104389.3-201ENST00000445629 235 ntBASIC2.35□□□□□ -2.03
PCDH15Q96QU1 CASP3P1-201ENST00000446037 609 ntBASIC2.35□□□□□ -2.03
PCDH15Q96QU1 AC068587.2-201ENST00000478386 781 ntBASIC2.35□□□□□ -2.03
PCDH15Q96QU1 AC092436.1-201ENST00000506450 503 ntBASIC2.35□□□□□ -2.03
PCDH15Q96QU1 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.35□□□□□ -2.03
PCDH15Q96QU1 AC021269.2-201ENST00000532318 330 ntBASIC2.35□□□□□ -2.03
PCDH15Q96QU1 AC007536.1-201ENST00000533382 349 ntBASIC2.35□□□□□ -2.03
PCDH15Q96QU1 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC2.35□□□□□ -2.03
PCDH15Q96QU1 MIR5092-201ENST00000583139 88 ntBASIC2.35□□□□□ -2.03
PCDH15Q96QU1 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
PCDH15Q96QU1 AC110994.2-201ENST00000635481 492 ntBASIC2.35□□□□□ -2.03
PCDH15Q96QU1 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
PCDH15Q96QU1 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
PCDH15Q96QU1 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
PCDH15Q96QU1 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
PCDH15Q96QU1 AC117529.2-201ENST00000512159 2068 ntBASIC2.34□□□□□ -2.03
PCDH15Q96QU1 CNOT6LP1-201ENST00000559681 1462 ntBASIC2.34□□□□□ -2.03
PCDH15Q96QU1 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
PCDH15Q96QU1 SNORA51.4-201ENST00000364993 124 ntBASIC2.34□□□□□ -2.03
PCDH15Q96QU1 DYNLT3P1-201ENST00000378574 347 ntBASIC2.34□□□□□ -2.03
PCDH15Q96QU1 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
PCDH15Q96QU1 RNU6-482P-201ENST00000391068 107 ntBASIC2.34□□□□□ -2.03
PCDH15Q96QU1 CCNB2P1-201ENST00000399411 1150 ntBASIC2.34□□□□□ -2.03
PCDH15Q96QU1 RPS20P25-201ENST00000412447 352 ntBASIC2.34□□□□□ -2.03
PCDH15Q96QU1 TRIAP1P1-201ENST00000427062 225 ntBASIC2.34□□□□□ -2.03
PCDH15Q96QU1 AL606490.7-201ENST00000433136 191 ntBASIC2.34□□□□□ -2.03
PCDH15Q96QU1 AC093716.1-201ENST00000435923 377 ntBASIC2.34□□□□□ -2.03
PCDH15Q96QU1 MRPL50P4-201ENST00000446432 475 ntBASIC2.34□□□□□ -2.03
PCDH15Q96QU1 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC2.34□□□□□ -2.03
PCDH15Q96QU1 BUD31P2-201ENST00000449374 300 ntBASIC2.34□□□□□ -2.03
PCDH15Q96QU1 RPL7P31-201ENST00000450192 724 ntBASIC2.34□□□□□ -2.03
PCDH15Q96QU1 CLIC4P1-201ENST00000453177 535 ntBASIC2.34□□□□□ -2.03
PCDH15Q96QU1 AC091179.1-201ENST00000461606 579 ntBASIC2.34□□□□□ -2.03
PCDH15Q96QU1 AC133134.1-201ENST00000466800 359 ntBASIC2.34□□□□□ -2.03
PCDH15Q96QU1 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.34□□□□□ -2.03
PCDH15Q96QU1 ACTR6P1-201ENST00000514311 1104 ntBASIC2.34□□□□□ -2.03
PCDH15Q96QU1 ATP5F1P5-201ENST00000526403 760 ntBASIC2.34□□□□□ -2.03
PCDH15Q96QU1 AC019227.1-201ENST00000526902 510 ntBASIC2.34□□□□□ -2.03
PCDH15Q96QU1 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
PCDH15Q96QU1 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.34□□□□□ -2.03
PCDH15Q96QU1 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.34□□□□□ -2.03
PCDH15Q96QU1 AC046143.2-201ENST00000609789 160 ntBASIC2.34□□□□□ -2.03
PCDH15Q96QU1 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.34□□□□□ -2.03
PCDH15Q96QU1 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
PCDH15Q96QU1 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.34□□□□□ -2.03
PCDH15Q96QU1 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.34□□□□□ -2.03
PCDH15Q96QU1 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.34□□□□□ -2.04
PCDH15Q96QU1 SNORD65-201ENST00000391079 73 ntBASIC2.34□□□□□ -2.04
PCDH15Q96QU1 MTND4P11-201ENST00000417020 1058 ntBASIC2.34□□□□□ -2.04
PCDH15Q96QU1 HMGB3P21-201ENST00000452483 547 ntBASIC2.34□□□□□ -2.04
PCDH15Q96QU1 HMGN1P8-201ENST00000463578 288 ntBASIC2.34□□□□□ -2.04
PCDH15Q96QU1 RPS4XP6-201ENST00000477670 797 ntBASIC2.34□□□□□ -2.04
PCDH15Q96QU1 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC2.34□□□□□ -2.04
PCDH15Q96QU1 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC2.34□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms