Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 MTCO1P47-201ENST00000523889 1271 ntBASIC2.04□□□□□ -2.08
AP1S3Q96PC3 AL133271.1-201ENST00000538229 291 ntBASIC2.04□□□□□ -2.08
AP1S3Q96PC3 NOP56P3-201ENST00000549457 385 ntBASIC2.04□□□□□ -2.08
AP1S3Q96PC3 AL355836.1-201ENST00000555951 870 ntBASIC2.04□□□□□ -2.08
AP1S3Q96PC3 ACTR3BP3-201ENST00000565577 979 ntBASIC2.04□□□□□ -2.08
AP1S3Q96PC3 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC2.04□□□□□ -2.08
AP1S3Q96PC3 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC2.04□□□□□ -2.08
AP1S3Q96PC3 XIAPP1-201ENST00000603162 600 ntBASIC2.04□□□□□ -2.08
AP1S3Q96PC3 AL160237.3-201ENST00000604114 1013 ntBASIC2.04□□□□□ -2.08
AP1S3Q96PC3 AC008277.2-201ENST00000605196 797 ntBASIC2.04□□□□□ -2.08
AP1S3Q96PC3 AC000403.1-201ENST00000613696 3585 ntBASIC2.04□□□□□ -2.08
AP1S3Q96PC3 AL355810.1-201ENST00000614629 552 ntBASIC2.04□□□□□ -2.08
AP1S3Q96PC3 AL359693.1-201ENST00000614959 2407 ntBASIC2.04□□□□□ -2.08
AP1S3Q96PC3 AL355493.4-201ENST00000618530 292 ntBASIC2.04□□□□□ -2.08
AP1S3Q96PC3 AC090740.1-201ENST00000623193 2262 ntBASIC2.04□□□□□ -2.08
AP1S3Q96PC3 CR381653.2-201ENST00000624041 768 ntBASIC2.04□□□□□ -2.08
AP1S3Q96PC3 FTO-223ENST00000640179 210 ntTSL 5 BASIC2.04□□□□□ -2.08
AP1S3Q96PC3 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
AP1S3Q96PC3 AC092593.1-201ENST00000515413 1815 ntBASIC2.03□□□□□ -2.08
AP1S3Q96PC3 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.03□□□□□ -2.08
AP1S3Q96PC3 PABPC1P9-201ENST00000426076 1612 ntBASIC2.03□□□□□ -2.08
AP1S3Q96PC3 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
AP1S3Q96PC3 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC2.03□□□□□ -2.08
AP1S3Q96PC3 OR5H2-201ENST00000355273 945 ntBASIC2.03□□□□□ -2.08
AP1S3Q96PC3 RNVU1-3-201ENST00000364313 161 ntBASIC2.03□□□□□ -2.08
AP1S3Q96PC3 RNA5SP479-201ENST00000364858 117 ntBASIC2.03□□□□□ -2.08
AP1S3Q96PC3 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
AP1S3Q96PC3 PTMAP2-201ENST00000397627 327 ntBASIC2.03□□□□□ -2.08
AP1S3Q96PC3 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
AP1S3Q96PC3 RPS4XP7-201ENST00000406274 780 ntBASIC2.03□□□□□ -2.08
AP1S3Q96PC3 OFD1P18Y-201ENST00000420889 959 ntBASIC2.03□□□□□ -2.08
AP1S3Q96PC3 AL389915.1-201ENST00000422463 466 ntBASIC2.03□□□□□ -2.08
AP1S3Q96PC3 AL160175.1-201ENST00000428124 247 ntBASIC2.03□□□□□ -2.08
AP1S3Q96PC3 AC005326.1-201ENST00000429197 123 ntBASIC2.03□□□□□ -2.08
AP1S3Q96PC3 UBE2V1P1-201ENST00000430836 445 ntBASIC2.03□□□□□ -2.08
AP1S3Q96PC3 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC2.03□□□□□ -2.08
AP1S3Q96PC3 AL591503.2-201ENST00000442314 1005 ntBASIC2.03□□□□□ -2.08
AP1S3Q96PC3 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.03□□□□□ -2.08
AP1S3Q96PC3 AL671855.1-201ENST00000446875 1203 ntBASIC2.03□□□□□ -2.08
AP1S3Q96PC3 AL034418.1-201ENST00000448675 860 ntBASIC2.03□□□□□ -2.08
AP1S3Q96PC3 AC112492.1-201ENST00000449607 712 ntBASIC2.03□□□□□ -2.08
AP1S3Q96PC3 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.03□□□□□ -2.08
AP1S3Q96PC3 BTF3P5-201ENST00000457252 467 ntBASIC2.03□□□□□ -2.08
AP1S3Q96PC3 RPS4XP6-201ENST00000477670 797 ntBASIC2.03□□□□□ -2.08
AP1S3Q96PC3 AL133372.1-201ENST00000493565 745 ntBASIC2.03□□□□□ -2.08
AP1S3Q96PC3 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
AP1S3Q96PC3 AC083906.5-201ENST00000503722 328 ntBASIC2.03□□□□□ -2.08
AP1S3Q96PC3 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.03□□□□□ -2.08
AP1S3Q96PC3 WBP1LP4-201ENST00000505043 344 ntBASIC2.03□□□□□ -2.08
AP1S3Q96PC3 HMGB3P3-201ENST00000510526 400 ntBASIC2.03□□□□□ -2.08
AP1S3Q96PC3 COX6B1P6-201ENST00000522347 255 ntBASIC2.03□□□□□ -2.08
AP1S3Q96PC3 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC2.03□□□□□ -2.08
AP1S3Q96PC3 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.03□□□□□ -2.08
AP1S3Q96PC3 H3F3AP1-201ENST00000559984 334 ntBASIC2.03□□□□□ -2.08
AP1S3Q96PC3 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.03□□□□□ -2.08
AP1S3Q96PC3 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC2.03□□□□□ -2.08
AP1S3Q96PC3 AP004372.1-201ENST00000604842 844 ntBASIC2.03□□□□□ -2.08
AP1S3Q96PC3 AL009028.1-201ENST00000604895 802 ntBASIC2.03□□□□□ -2.08
AP1S3Q96PC3 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.03□□□□□ -2.08
AP1S3Q96PC3 AC092650.2-201ENST00000619984 902 ntBASIC2.03□□□□□ -2.08
AP1S3Q96PC3 AL360181.4-201ENST00000621752 134 ntBASIC2.03□□□□□ -2.08
AP1S3Q96PC3 AC110079.1-202ENST00000635213 138 ntBASIC2.03□□□□□ -2.08
AP1S3Q96PC3 CUL1P1-201ENST00000509510 2425 ntBASIC2.03□□□□□ -2.08
AP1S3Q96PC3 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.09
AP1S3Q96PC3 SGO1P2-201ENST00000429458 1589 ntBASIC2.02□□□□□ -2.09
AP1S3Q96PC3 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.02□□□□□ -2.09
AP1S3Q96PC3 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.02□□□□□ -2.09
AP1S3Q96PC3 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
AP1S3Q96PC3 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
AP1S3Q96PC3 SNORA80E-201ENST00000384744 137 ntBASIC2.02□□□□□ -2.09
AP1S3Q96PC3 MORF4L1P6-201ENST00000418771 268 ntBASIC2.02□□□□□ -2.09
AP1S3Q96PC3 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC2.02□□□□□ -2.09
AP1S3Q96PC3 DUTP6-201ENST00000425573 462 ntBASIC2.02□□□□□ -2.09
AP1S3Q96PC3 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
AP1S3Q96PC3 RPS20P5-201ENST00000434808 360 ntBASIC2.02□□□□□ -2.09
AP1S3Q96PC3 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.02□□□□□ -2.09
AP1S3Q96PC3 MTCYBP34-201ENST00000439552 670 ntBASIC2.02□□□□□ -2.09
AP1S3Q96PC3 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.02□□□□□ -2.09
AP1S3Q96PC3 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.02□□□□□ -2.09
AP1S3Q96PC3 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.02□□□□□ -2.09
AP1S3Q96PC3 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
AP1S3Q96PC3 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC2.02□□□□□ -2.09
AP1S3Q96PC3 AC090543.1-201ENST00000492168 485 ntBASIC2.02□□□□□ -2.09
AP1S3Q96PC3 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC2.02□□□□□ -2.09
AP1S3Q96PC3 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.02□□□□□ -2.09
AP1S3Q96PC3 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.02□□□□□ -2.09
AP1S3Q96PC3 SCGB1D5P-201ENST00000515134 247 ntBASIC2.02□□□□□ -2.09
AP1S3Q96PC3 RNA5SP82-201ENST00000516707 92 ntBASIC2.02□□□□□ -2.09
AP1S3Q96PC3 AC009812.2-201ENST00000517657 457 ntBASIC2.02□□□□□ -2.09
AP1S3Q96PC3 DUXAP2-201ENST00000519198 589 ntBASIC2.02□□□□□ -2.09
AP1S3Q96PC3 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC2.02□□□□□ -2.09
AP1S3Q96PC3 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
AP1S3Q96PC3 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC2.02□□□□□ -2.09
AP1S3Q96PC3 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.02□□□□□ -2.09
AP1S3Q96PC3 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.02□□□□□ -2.09
AP1S3Q96PC3 AC023158.1-201ENST00000561632 1025 ntBASIC2.02□□□□□ -2.09
AP1S3Q96PC3 AC090666.1-201ENST00000578241 445 ntBASIC2.02□□□□□ -2.09
AP1S3Q96PC3 MIR5004-201ENST00000579078 107 ntBASIC2.02□□□□□ -2.09
AP1S3Q96PC3 AC006130.2-201ENST00000586202 326 ntBASIC2.02□□□□□ -2.09
AP1S3Q96PC3 AL669831.4-202ENST00000590817 238 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms