Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 VN1R104P-201ENST00000505115 1009 ntBASIC3.46□□□□□ -1.86
PKNOX2Q96KN3 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.46□□□□□ -1.86
PKNOX2Q96KN3 AC093853.1-201ENST00000515689 483 ntBASIC3.46□□□□□ -1.86
PKNOX2Q96KN3 SNORA70.18-201ENST00000516696 98 ntBASIC3.46□□□□□ -1.86
PKNOX2Q96KN3 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.46□□□□□ -1.86
PKNOX2Q96KN3 C1DP5-201ENST00000525775 383 ntBASIC3.46□□□□□ -1.86
PKNOX2Q96KN3 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.46□□□□□ -1.86
PKNOX2Q96KN3 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.46□□□□□ -1.86
PKNOX2Q96KN3 AC025918.2-201ENST00000558683 763 ntBASIC3.46□□□□□ -1.86
PKNOX2Q96KN3 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.46□□□□□ -1.86
PKNOX2Q96KN3 AMZ2P1-203ENST00000565833 850 ntBASIC3.46□□□□□ -1.86
PKNOX2Q96KN3 AC067852.3-201ENST00000589177 561 ntBASIC3.46□□□□□ -1.86
PKNOX2Q96KN3 AC040174.2-201ENST00000602701 465 ntBASIC3.46□□□□□ -1.86
PKNOX2Q96KN3 AC006329.2-201ENST00000611491 394 ntBASIC3.46□□□□□ -1.86
PKNOX2Q96KN3 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.46□□□□□ -1.86
PKNOX2Q96KN3 AL449363.1-201ENST00000617815 186 ntBASIC3.46□□□□□ -1.86
PKNOX2Q96KN3 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PKNOX2Q96KN3 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PKNOX2Q96KN3 AL356321.1-201ENST00000621360 228 ntBASIC3.46□□□□□ -1.86
PKNOX2Q96KN3 U4.6-201ENST00000621618 127 ntBASIC3.46□□□□□ -1.86
PKNOX2Q96KN3 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.46□□□□□ -1.86
PKNOX2Q96KN3 U6.107-201ENST00000637108 79 ntBASIC3.46□□□□□ -1.86
PKNOX2Q96KN3 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PKNOX2Q96KN3 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PKNOX2Q96KN3 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PKNOX2Q96KN3 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.45□□□□□ -1.86
PKNOX2Q96KN3 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
PKNOX2Q96KN3 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
PKNOX2Q96KN3 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.45□□□□□ -1.86
PKNOX2Q96KN3 AL513475.1-201ENST00000406602 315 ntBASIC3.45□□□□□ -1.86
PKNOX2Q96KN3 AL389915.1-201ENST00000422463 466 ntBASIC3.45□□□□□ -1.86
PKNOX2Q96KN3 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.45□□□□□ -1.86
PKNOX2Q96KN3 MORF4L1P7-201ENST00000426038 703 ntBASIC3.45□□□□□ -1.86
PKNOX2Q96KN3 AL691517.1-201ENST00000440833 1235 ntBASIC3.45□□□□□ -1.86
PKNOX2Q96KN3 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.45□□□□□ -1.86
PKNOX2Q96KN3 AC008280.2-201ENST00000455473 307 ntBASIC3.45□□□□□ -1.86
PKNOX2Q96KN3 HESX1-202ENST00000473921 757 ntTSL 5 BASIC3.45□□□□□ -1.86
PKNOX2Q96KN3 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.45□□□□□ -1.86
PKNOX2Q96KN3 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.45□□□□□ -1.86
PKNOX2Q96KN3 SCARNA13-201ENST00000516672 275 ntBASIC3.45□□□□□ -1.86
PKNOX2Q96KN3 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.45□□□□□ -1.86
PKNOX2Q96KN3 FAM60DP-201ENST00000524174 632 ntBASIC3.45□□□□□ -1.86
PKNOX2Q96KN3 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC3.45□□□□□ -1.86
PKNOX2Q96KN3 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.45□□□□□ -1.86
PKNOX2Q96KN3 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.45□□□□□ -1.86
PKNOX2Q96KN3 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC3.45□□□□□ -1.86
PKNOX2Q96KN3 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.45□□□□□ -1.86
PKNOX2Q96KN3 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC3.45□□□□□ -1.86
PKNOX2Q96KN3 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.45□□□□□ -1.86
PKNOX2Q96KN3 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PKNOX2Q96KN3 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.45□□□□□ -1.86
PKNOX2Q96KN3 MIR1264-201ENST00000616374 69 ntBASIC3.45□□□□□ -1.86
PKNOX2Q96KN3 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
PKNOX2Q96KN3 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.45□□□□□ -1.86
PKNOX2Q96KN3 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
PKNOX2Q96KN3 AC083865.1-201ENST00000636634 831 ntBASIC3.45□□□□□ -1.86
PKNOX2Q96KN3 CR383658.2-201ENST00000547576 1525 ntBASIC3.44□□□□□ -1.86
PKNOX2Q96KN3 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PKNOX2Q96KN3 SDAD1P2-201ENST00000441308 2028 ntBASIC3.44□□□□□ -1.86
PKNOX2Q96KN3 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.44□□□□□ -1.86
PKNOX2Q96KN3 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.44□□□□□ -1.86
PKNOX2Q96KN3 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.44□□□□□ -1.86
PKNOX2Q96KN3 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PKNOX2Q96KN3 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PKNOX2Q96KN3 RNA5SP283-201ENST00000365604 119 ntBASIC3.44□□□□□ -1.86
PKNOX2Q96KN3 SNORA6-201ENST00000384033 151 ntBASIC3.44□□□□□ -1.86
PKNOX2Q96KN3 SNORA70C-201ENST00000384538 135 ntBASIC3.44□□□□□ -1.86
PKNOX2Q96KN3 MIR493-201ENST00000385254 89 ntBASIC3.44□□□□□ -1.86
PKNOX2Q96KN3 AL513331.1-201ENST00000411908 397 ntBASIC3.44□□□□□ -1.86
PKNOX2Q96KN3 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.44□□□□□ -1.86
PKNOX2Q96KN3 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.44□□□□□ -1.86
PKNOX2Q96KN3 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.44□□□□□ -1.86
PKNOX2Q96KN3 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.44□□□□□ -1.86
PKNOX2Q96KN3 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.44□□□□□ -1.86
PKNOX2Q96KN3 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.44□□□□□ -1.86
PKNOX2Q96KN3 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.44□□□□□ -1.86
PKNOX2Q96KN3 SNORD105B-201ENST00000458770 79 ntBASIC3.44□□□□□ -1.86
PKNOX2Q96KN3 RN7SL297P-201ENST00000483161 293 ntBASIC3.44□□□□□ -1.86
PKNOX2Q96KN3 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.44□□□□□ -1.86
PKNOX2Q96KN3 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.44□□□□□ -1.86
PKNOX2Q96KN3 RAB9BP1-201ENST00000519581 626 ntBASIC3.44□□□□□ -1.86
PKNOX2Q96KN3 AC007115.1-201ENST00000546853 234 ntBASIC3.44□□□□□ -1.86
PKNOX2Q96KN3 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.44□□□□□ -1.86
PKNOX2Q96KN3 FAM60BP-201ENST00000578364 658 ntBASIC3.44□□□□□ -1.86
PKNOX2Q96KN3 RPS15AP11-201ENST00000594193 385 ntBASIC3.44□□□□□ -1.86
PKNOX2Q96KN3 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.44□□□□□ -1.86
PKNOX2Q96KN3 MIR6716-201ENST00000613413 80 ntBASIC3.44□□□□□ -1.86
PKNOX2Q96KN3 AC003001.2-201ENST00000616294 831 ntBASIC3.44□□□□□ -1.86
PKNOX2Q96KN3 AC015967.1-201ENST00000619893 476 ntBASIC3.44□□□□□ -1.86
PKNOX2Q96KN3 AL354798.1-201ENST00000622505 329 ntBASIC3.44□□□□□ -1.86
PKNOX2Q96KN3 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
PKNOX2Q96KN3 AL118508.4-201ENST00000624142 1176 ntBASIC3.44□□□□□ -1.86
PKNOX2Q96KN3 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.44□□□□□ -1.86
PKNOX2Q96KN3 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.44□□□□□ -1.86
PKNOX2Q96KN3 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PKNOX2Q96KN3 AL355596.1-201ENST00000565399 3996 ntBASIC3.44□□□□□ -1.86
PKNOX2Q96KN3 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
PKNOX2Q96KN3 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.43□□□□□ -1.86
PKNOX2Q96KN3 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.43□□□□□ -1.86
PKNOX2Q96KN3 AC126755.2-208ENST00000327792 462 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 153 ms