Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.67□□□□□ -1.82
VMP1Q96GC9 MOB1AP1-201ENST00000430903 535 ntBASIC3.67□□□□□ -1.82
VMP1Q96GC9 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.67□□□□□ -1.82
VMP1Q96GC9 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.67□□□□□ -1.82
VMP1Q96GC9 TRGVB-201ENST00000453257 471 ntBASIC3.67□□□□□ -1.82
VMP1Q96GC9 AC104164.3-201ENST00000467363 1258 ntBASIC3.67□□□□□ -1.82
VMP1Q96GC9 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
VMP1Q96GC9 AC114322.1-201ENST00000506771 926 ntBASIC3.67□□□□□ -1.82
VMP1Q96GC9 RNU6-583P-201ENST00000516012 92 ntBASIC3.67□□□□□ -1.82
VMP1Q96GC9 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.67□□□□□ -1.82
VMP1Q96GC9 YPEL5P3-201ENST00000547227 352 ntBASIC3.67□□□□□ -1.82
VMP1Q96GC9 AL121576.1-201ENST00000556055 276 ntBASIC3.67□□□□□ -1.82
VMP1Q96GC9 AC106785.1-201ENST00000565935 262 ntBASIC3.67□□□□□ -1.82
VMP1Q96GC9 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.67□□□□□ -1.82
VMP1Q96GC9 RN7SL703P-201ENST00000578485 302 ntBASIC3.67□□□□□ -1.82
VMP1Q96GC9 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.67□□□□□ -1.82
VMP1Q96GC9 VN1R83P-201ENST00000595685 445 ntBASIC3.67□□□□□ -1.82
VMP1Q96GC9 AC106791.2-201ENST00000604680 391 ntBASIC3.67□□□□□ -1.82
VMP1Q96GC9 DUXAP10-204ENST00000612052 616 ntBASIC3.67□□□□□ -1.82
VMP1Q96GC9 AL592295.2-201ENST00000612578 206 ntBASIC3.67□□□□□ -1.82
VMP1Q96GC9 RNVU1-4-201ENST00000612985 164 ntBASIC3.67□□□□□ -1.82
VMP1Q96GC9 AL591424.2-201ENST00000617023 128 ntBASIC3.67□□□□□ -1.82
VMP1Q96GC9 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.67□□□□□ -1.82
VMP1Q96GC9 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
VMP1Q96GC9 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.67□□□□□ -1.82
VMP1Q96GC9 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
VMP1Q96GC9 AC009812.4-201ENST00000569134 1805 ntBASIC3.67□□□□□ -1.82
VMP1Q96GC9 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
VMP1Q96GC9 AC058791.1-201ENST00000608412 3198 ntBASIC3.67□□□□□ -1.82
VMP1Q96GC9 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
VMP1Q96GC9 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
VMP1Q96GC9 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.66□□□□□ -1.82
VMP1Q96GC9 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.66□□□□□ -1.82
VMP1Q96GC9 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.66□□□□□ -1.82
VMP1Q96GC9 RIOK3P1-201ENST00000418778 1528 ntBASIC3.66□□□□□ -1.82
VMP1Q96GC9 FRG1BP-201ENST00000278882 761 ntBASIC3.66□□□□□ -1.82
VMP1Q96GC9 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
VMP1Q96GC9 DEFB108F-201ENST00000344638 222 ntBASIC3.66□□□□□ -1.82
VMP1Q96GC9 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
VMP1Q96GC9 RNU6-213P-201ENST00000384051 104 ntBASIC3.66□□□□□ -1.82
VMP1Q96GC9 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
VMP1Q96GC9 DHFRP6-201ENST00000401776 268 ntBASIC3.66□□□□□ -1.82
VMP1Q96GC9 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.66□□□□□ -1.82
VMP1Q96GC9 AL592310.1-201ENST00000414330 671 ntBASIC3.66□□□□□ -1.82
VMP1Q96GC9 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.66□□□□□ -1.82
VMP1Q96GC9 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.66□□□□□ -1.82
VMP1Q96GC9 HMGB1P37-201ENST00000439613 609 ntBASIC3.66□□□□□ -1.82
VMP1Q96GC9 RPS29P7-201ENST00000439662 171 ntBASIC3.66□□□□□ -1.82
VMP1Q96GC9 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.66□□□□□ -1.82
VMP1Q96GC9 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.66□□□□□ -1.82
VMP1Q96GC9 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.66□□□□□ -1.82
VMP1Q96GC9 DNAJC19P1-201ENST00000455312 319 ntBASIC3.66□□□□□ -1.82
VMP1Q96GC9 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.66□□□□□ -1.82
VMP1Q96GC9 AL359385.1-201ENST00000456509 365 ntBASIC3.66□□□□□ -1.82
VMP1Q96GC9 AC004801.2-202ENST00000463559 283 ntBASIC3.66□□□□□ -1.82
VMP1Q96GC9 AC020898.1-201ENST00000474167 787 ntBASIC3.66□□□□□ -1.82
VMP1Q96GC9 MTCYBP17-201ENST00000503579 789 ntBASIC3.66□□□□□ -1.82
VMP1Q96GC9 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.66□□□□□ -1.82
VMP1Q96GC9 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.66□□□□□ -1.82
VMP1Q96GC9 AC103783.1-201ENST00000520506 373 ntBASIC3.66□□□□□ -1.82
VMP1Q96GC9 OR10V3P-201ENST00000525712 725 ntBASIC3.66□□□□□ -1.82
VMP1Q96GC9 DEFB108D-201ENST00000527787 222 ntBASIC3.66□□□□□ -1.82
VMP1Q96GC9 AC005832.3-201ENST00000537929 631 ntBASIC3.66□□□□□ -1.82
VMP1Q96GC9 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.66□□□□□ -1.82
VMP1Q96GC9 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.66□□□□□ -1.82
VMP1Q96GC9 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
VMP1Q96GC9 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.66□□□□□ -1.82
VMP1Q96GC9 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC3.66□□□□□ -1.82
VMP1Q96GC9 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.66□□□□□ -1.82
VMP1Q96GC9 AL132657.2-201ENST00000564417 358 ntBASIC3.66□□□□□ -1.82
VMP1Q96GC9 MTCO3P24-201ENST00000572729 782 ntBASIC3.66□□□□□ -1.82
VMP1Q96GC9 CCDC58P3-201ENST00000590792 430 ntBASIC3.66□□□□□ -1.82
VMP1Q96GC9 AC021749.1-201ENST00000604322 607 ntBASIC3.66□□□□□ -1.82
VMP1Q96GC9 PART1_2.1-201ENST00000612397 250 ntBASIC3.66□□□□□ -1.82
VMP1Q96GC9 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
VMP1Q96GC9 AC022509.4-201ENST00000621404 572 ntBASIC3.66□□□□□ -1.82
VMP1Q96GC9 AC011330.2-201ENST00000621680 635 ntBASIC3.66□□□□□ -1.82
VMP1Q96GC9 AL049777.1-201ENST00000622740 518 ntBASIC3.66□□□□□ -1.82
VMP1Q96GC9 AC004808.1-201ENST00000627671 721 ntBASIC3.66□□□□□ -1.82
VMP1Q96GC9 MAPK10-322ENST00000641485 4530 ntBASIC3.66□□□□□ -1.82
VMP1Q96GC9 AC011460.1-201ENST00000636268 1834 ntBASIC3.65□□□□□ -1.82
VMP1Q96GC9 SNORA14A-201ENST00000364773 135 ntBASIC3.65□□□□□ -1.83
VMP1Q96GC9 AL031679.1-201ENST00000400616 525 ntBASIC3.65□□□□□ -1.83
VMP1Q96GC9 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.65□□□□□ -1.83
VMP1Q96GC9 HMGB1P17-201ENST00000403495 628 ntBASIC3.65□□□□□ -1.83
VMP1Q96GC9 RN7SKP285-201ENST00000410137 318 ntBASIC3.65□□□□□ -1.83
VMP1Q96GC9 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.65□□□□□ -1.83
VMP1Q96GC9 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.65□□□□□ -1.83
VMP1Q96GC9 OSTCP5-201ENST00000425293 453 ntBASIC3.65□□□□□ -1.83
VMP1Q96GC9 AL353705.1-201ENST00000433468 480 ntBASIC3.65□□□□□ -1.83
VMP1Q96GC9 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.65□□□□□ -1.83
VMP1Q96GC9 SDCBPP1-201ENST00000440192 890 ntBASIC3.65□□□□□ -1.83
VMP1Q96GC9 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.65□□□□□ -1.83
VMP1Q96GC9 CDC27P1-201ENST00000445384 715 ntBASIC3.65□□□□□ -1.83
VMP1Q96GC9 AL592447.1-201ENST00000447592 540 ntBASIC3.65□□□□□ -1.83
VMP1Q96GC9 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.65□□□□□ -1.83
VMP1Q96GC9 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
VMP1Q96GC9 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.65□□□□□ -1.83
VMP1Q96GC9 AC113420.1-201ENST00000507903 571 ntBASIC3.65□□□□□ -1.83
VMP1Q96GC9 AL359273.1-201ENST00000510918 627 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms