Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.65□□□□□ -1.83
VPS33AQ96AX1 RNU5A-4P-201ENST00000516588 111 ntBASIC3.65□□□□□ -1.83
VPS33AQ96AX1 NDUFA5P2-201ENST00000519723 344 ntBASIC3.65□□□□□ -1.83
VPS33AQ96AX1 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.65□□□□□ -1.83
VPS33AQ96AX1 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.65□□□□□ -1.83
VPS33AQ96AX1 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.65□□□□□ -1.83
VPS33AQ96AX1 AC009643.1-201ENST00000532030 391 ntBASIC3.65□□□□□ -1.83
VPS33AQ96AX1 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC3.65□□□□□ -1.83
VPS33AQ96AX1 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.65□□□□□ -1.83
VPS33AQ96AX1 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC3.65□□□□□ -1.83
VPS33AQ96AX1 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.65□□□□□ -1.83
VPS33AQ96AX1 AL121576.1-201ENST00000556055 276 ntBASIC3.65□□□□□ -1.83
VPS33AQ96AX1 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.65□□□□□ -1.83
VPS33AQ96AX1 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.65□□□□□ -1.83
VPS33AQ96AX1 AL596327.1-201ENST00000603629 213 ntBASIC3.65□□□□□ -1.83
VPS33AQ96AX1 AC092354.2-201ENST00000607786 514 ntBASIC3.65□□□□□ -1.83
VPS33AQ96AX1 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.65□□□□□ -1.83
VPS33AQ96AX1 AC079684.1-201ENST00000621405 437 ntBASIC3.65□□□□□ -1.83
VPS33AQ96AX1 AC073073.2-201ENST00000609827 2578 ntBASIC3.65□□□□□ -1.83
VPS33AQ96AX1 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
VPS33AQ96AX1 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
VPS33AQ96AX1 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
VPS33AQ96AX1 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
VPS33AQ96AX1 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
VPS33AQ96AX1 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
VPS33AQ96AX1 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
VPS33AQ96AX1 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
VPS33AQ96AX1 FRG1BP-201ENST00000278882 761 ntBASIC3.64□□□□□ -1.83
VPS33AQ96AX1 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
VPS33AQ96AX1 RNU6-157P-201ENST00000383957 107 ntBASIC3.64□□□□□ -1.83
VPS33AQ96AX1 MIR199A2-201ENST00000385289 110 ntBASIC3.64□□□□□ -1.83
VPS33AQ96AX1 OR6C69P-201ENST00000394268 893 ntBASIC3.64□□□□□ -1.83
VPS33AQ96AX1 AL591034.1-201ENST00000407447 340 ntBASIC3.64□□□□□ -1.83
VPS33AQ96AX1 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.64□□□□□ -1.83
VPS33AQ96AX1 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.64□□□□□ -1.83
VPS33AQ96AX1 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.64□□□□□ -1.83
VPS33AQ96AX1 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC3.64□□□□□ -1.83
VPS33AQ96AX1 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.64□□□□□ -1.83
VPS33AQ96AX1 Z74696.2-201ENST00000436514 498 ntBASIC3.64□□□□□ -1.83
VPS33AQ96AX1 Z80107.1-201ENST00000436830 412 ntBASIC3.64□□□□□ -1.83
VPS33AQ96AX1 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
VPS33AQ96AX1 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.64□□□□□ -1.83
VPS33AQ96AX1 RPL21P11-201ENST00000461458 483 ntBASIC3.64□□□□□ -1.83
VPS33AQ96AX1 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.64□□□□□ -1.83
VPS33AQ96AX1 AC091951.3-201ENST00000504093 246 ntBASIC3.64□□□□□ -1.83
VPS33AQ96AX1 AC034244.1-201ENST00000507687 207 ntBASIC3.64□□□□□ -1.83
VPS33AQ96AX1 AC024589.1-201ENST00000512207 263 ntBASIC3.64□□□□□ -1.83
VPS33AQ96AX1 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.64□□□□□ -1.83
VPS33AQ96AX1 AC017037.2-201ENST00000513850 890 ntBASIC3.64□□□□□ -1.83
VPS33AQ96AX1 AC022483.1-201ENST00000514020 567 ntBASIC3.64□□□□□ -1.83
VPS33AQ96AX1 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.64□□□□□ -1.83
VPS33AQ96AX1 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.64□□□□□ -1.83
VPS33AQ96AX1 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.64□□□□□ -1.83
VPS33AQ96AX1 DUXAP1-201ENST00000556632 463 ntBASIC3.64□□□□□ -1.83
VPS33AQ96AX1 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.64□□□□□ -1.83
VPS33AQ96AX1 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.64□□□□□ -1.83
VPS33AQ96AX1 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.64□□□□□ -1.83
VPS33AQ96AX1 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.64□□□□□ -1.83
VPS33AQ96AX1 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.64□□□□□ -1.83
VPS33AQ96AX1 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.64□□□□□ -1.83
VPS33AQ96AX1 AC061975.8-201ENST00000587058 721 ntBASIC3.64□□□□□ -1.83
VPS33AQ96AX1 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.64□□□□□ -1.83
VPS33AQ96AX1 AL391001.1-201ENST00000602747 715 ntBASIC3.64□□□□□ -1.83
VPS33AQ96AX1 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.64□□□□□ -1.83
VPS33AQ96AX1 AC011451.2-201ENST00000604303 598 ntBASIC3.64□□□□□ -1.83
VPS33AQ96AX1 AL133507.1-201ENST00000605269 557 ntBASIC3.64□□□□□ -1.83
VPS33AQ96AX1 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.64□□□□□ -1.83
VPS33AQ96AX1 AC092653.1-201ENST00000608509 531 ntBASIC3.64□□□□□ -1.83
VPS33AQ96AX1 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.64□□□□□ -1.83
VPS33AQ96AX1 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
VPS33AQ96AX1 ZNF876P-202ENST00000398732 1485 ntBASIC3.64□□□□□ -1.83
VPS33AQ96AX1 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
VPS33AQ96AX1 AC090740.1-201ENST00000623193 2262 ntBASIC3.64□□□□□ -1.83
VPS33AQ96AX1 RIOK3P1-201ENST00000418778 1528 ntBASIC3.64□□□□□ -1.83
VPS33AQ96AX1 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
VPS33AQ96AX1 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
VPS33AQ96AX1 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.63□□□□□ -1.83
VPS33AQ96AX1 AC009812.4-201ENST00000569134 1805 ntBASIC3.63□□□□□ -1.83
VPS33AQ96AX1 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.63□□□□□ -1.83
VPS33AQ96AX1 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.63□□□□□ -1.83
VPS33AQ96AX1 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.63□□□□□ -1.83
VPS33AQ96AX1 RNU4-28P-201ENST00000364739 141 ntBASIC3.63□□□□□ -1.83
VPS33AQ96AX1 MIR585-201ENST00000384887 94 ntBASIC3.63□□□□□ -1.83
VPS33AQ96AX1 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.63□□□□□ -1.83
VPS33AQ96AX1 PTMAP5-201ENST00000393073 333 ntBASIC3.63□□□□□ -1.83
VPS33AQ96AX1 AL391417.1-201ENST00000404100 426 ntBASIC3.63□□□□□ -1.83
VPS33AQ96AX1 RNU6-757P-201ENST00000410334 100 ntBASIC3.63□□□□□ -1.83
VPS33AQ96AX1 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.63□□□□□ -1.83
VPS33AQ96AX1 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.63□□□□□ -1.83
VPS33AQ96AX1 AC007390.1-201ENST00000415722 356 ntBASIC3.63□□□□□ -1.83
VPS33AQ96AX1 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.63□□□□□ -1.83
VPS33AQ96AX1 RPL22P18-201ENST00000417197 377 ntBASIC3.63□□□□□ -1.83
VPS33AQ96AX1 SSXP9-201ENST00000417503 292 ntBASIC3.63□□□□□ -1.83
VPS33AQ96AX1 Z97055.1-201ENST00000419730 712 ntBASIC3.63□□□□□ -1.83
VPS33AQ96AX1 AC245028.1-201ENST00000423259 256 ntBASIC3.63□□□□□ -1.83
VPS33AQ96AX1 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC3.63□□□□□ -1.83
VPS33AQ96AX1 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC3.63□□□□□ -1.83
VPS33AQ96AX1 TXNL1P1-201ENST00000429528 554 ntBASIC3.63□□□□□ -1.83
VPS33AQ96AX1 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.63□□□□□ -1.83
VPS33AQ96AX1 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms