Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 AL138827.1-201ENST00000402666 306 ntBASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 AC006989.1-201ENST00000427212 131 ntBASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 AL450263.2-201ENST00000439400 589 ntBASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 BNIP3P38-201ENST00000601117 544 ntBASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 AC012557.2-201ENST00000605919 418 ntBASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 AC093311.1-201ENST00000506586 2021 ntBASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 AC004448.2-201ENST00000422360 586 ntBASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 MTCYBP31-201ENST00000438855 1122 ntBASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 SNORD13-201ENST00000459299 104 ntBASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 AC006483.1-201ENST00000487308 313 ntBASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 OR5G4P-201ENST00000525251 760 ntBASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 PHACTR2P1-201ENST00000605639 1414 ntBASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 SNORA51.10-201ENST00000384418 136 ntBASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 AC009237.8-201ENST00000445492 379 ntBASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 Y_RNA.684-201ENST00000516510 99 ntBASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 GLYCAM1-201ENST00000546596 285 ntBASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 AC136443.5-201ENST00000603741 370 ntBASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 RPS15AP28-201ENST00000435088 386 ntBASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 AC074367.1-201ENST00000438685 1125 ntBASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 AC003982.1-202ENST00000469928 248 ntBASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 AC021146.3-201ENST00000511911 260 ntBASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 RNA5SP190-201ENST00000365222 118 ntBASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 RNA5SP266-201ENST00000410273 108 ntBASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 OFD1P13Y-201ENST00000431179 1232 ntBASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 AC126121.1-201ENST00000482313 553 ntBASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 SNORA70.19-201ENST00000516717 90 ntBASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 SCARNA20.6-201ENST00000517251 106 ntBASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 IGLV3-26-201ENST00000520756 302 ntBASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 RPS3AP23-202ENST00000574601 686 ntBASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 AL353743.4-201ENST00000422653 1547 ntBASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 AL353597.2-202ENST00000434901 373 ntBASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 AC090543.1-201ENST00000492168 485 ntBASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 SUMO2P19-201ENST00000518920 295 ntBASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 AC103810.8-201ENST00000607347 118 ntBASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 OR4G1P-203ENST00000641984 1631 ntBASIC1.03□□□□□ -2.24
SYNE2Q8WXH0 AC134026.1-201ENST00000623249 2239 ntBASIC1.03□□□□□ -2.25
SYNE2Q8WXH0 THUMPD3P1-201ENST00000506556 1480 ntBASIC1.03□□□□□ -2.25
SYNE2Q8WXH0 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.25
SYNE2Q8WXH0 AL138785.1-201ENST00000425821 331 ntBASIC1.03□□□□□ -2.25
SYNE2Q8WXH0 MED6P1-201ENST00000439659 713 ntBASIC1.03□□□□□ -2.25
SYNE2Q8WXH0 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC1.03□□□□□ -2.25
SYNE2Q8WXH0 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.25
SYNE2Q8WXH0 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC1.03□□□□□ -2.25
SYNE2Q8WXH0 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.25
SYNE2Q8WXH0 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC1.02□□□□□ -2.25
SYNE2Q8WXH0 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
SYNE2Q8WXH0 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
SYNE2Q8WXH0 SNORD62.1-201ENST00000362541 86 ntBASIC1.02□□□□□ -2.25
SYNE2Q8WXH0 RNU11-201ENST00000387069 134 ntBASIC1.02□□□□□ -2.25
SYNE2Q8WXH0 AC244505.5-201ENST00000443639 207 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms