Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.63□□□□□ -1.99
LMX1AQ8TE12 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.62□□□□□ -1.99
LMX1AQ8TE12 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
LMX1AQ8TE12 U3.12-201ENST00000364498 214 ntBASIC2.62□□□□□ -1.99
LMX1AQ8TE12 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
LMX1AQ8TE12 AL139039.1-201ENST00000401900 692 ntBASIC2.62□□□□□ -1.99
LMX1AQ8TE12 AL589655.1-201ENST00000405398 482 ntBASIC2.62□□□□□ -1.99
LMX1AQ8TE12 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.62□□□□□ -1.99
LMX1AQ8TE12 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.62□□□□□ -1.99
LMX1AQ8TE12 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.62□□□□□ -1.99
LMX1AQ8TE12 BMS1P22-201ENST00000414726 313 ntBASIC2.62□□□□□ -1.99
LMX1AQ8TE12 RPS15AP40-201ENST00000419621 391 ntBASIC2.62□□□□□ -1.99
LMX1AQ8TE12 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.62□□□□□ -1.99
LMX1AQ8TE12 AC012498.1-201ENST00000424037 437 ntBASIC2.62□□□□□ -1.99
LMX1AQ8TE12 PSMA2P3-201ENST00000429685 675 ntBASIC2.62□□□□□ -1.99
LMX1AQ8TE12 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.62□□□□□ -1.99
LMX1AQ8TE12 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC2.62□□□□□ -1.99
LMX1AQ8TE12 AC112220.1-201ENST00000434628 355 ntBASIC2.62□□□□□ -1.99
LMX1AQ8TE12 Z77249.1-201ENST00000444622 1175 ntBASIC2.62□□□□□ -1.99
LMX1AQ8TE12 HMGN2P16-201ENST00000456802 261 ntBASIC2.62□□□□□ -1.99
LMX1AQ8TE12 NF1P3-201ENST00000457709 450 ntBASIC2.62□□□□□ -1.99
LMX1AQ8TE12 RNU6-775P-201ENST00000459318 96 ntBASIC2.62□□□□□ -1.99
LMX1AQ8TE12 SSR3-208ENST00000496050 579 ntTSL 4 BASIC2.62□□□□□ -1.99
LMX1AQ8TE12 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.62□□□□□ -1.99
LMX1AQ8TE12 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC2.62□□□□□ -1.99
LMX1AQ8TE12 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC2.62□□□□□ -1.99
LMX1AQ8TE12 RNA5SP148-201ENST00000516527 94 ntBASIC2.62□□□□□ -1.99
LMX1AQ8TE12 HMGB1P46-201ENST00000520062 610 ntBASIC2.62□□□□□ -1.99
LMX1AQ8TE12 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.62□□□□□ -1.99
LMX1AQ8TE12 AC067805.1-201ENST00000559344 470 ntBASIC2.62□□□□□ -1.99
LMX1AQ8TE12 MIR4474-201ENST00000579189 78 ntBASIC2.62□□□□□ -1.99
LMX1AQ8TE12 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC2.62□□□□□ -1.99
LMX1AQ8TE12 AC011374.2-201ENST00000607135 526 ntBASIC2.62□□□□□ -1.99
LMX1AQ8TE12 AC110792.4-201ENST00000609843 298 ntBASIC2.62□□□□□ -1.99
LMX1AQ8TE12 Z99129.2-201ENST00000619967 314 ntBASIC2.62□□□□□ -1.99
LMX1AQ8TE12 AC104820.1-201ENST00000624183 307 ntBASIC2.62□□□□□ -1.99
LMX1AQ8TE12 AC243829.7-201ENST00000633081 225 ntBASIC2.62□□□□□ -1.99
LMX1AQ8TE12 XPOTP1-201ENST00000443317 2398 ntBASIC2.62□□□□□ -1.99
LMX1AQ8TE12 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC2.62□□□□□ -1.99
LMX1AQ8TE12 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
LMX1AQ8TE12 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
LMX1AQ8TE12 AP000526.1-201ENST00000603308 1388 ntBASIC2.61□□□□□ -1.99
LMX1AQ8TE12 AC110774.1-201ENST00000623567 2018 ntBASIC2.61□□□□□ -1.99
LMX1AQ8TE12 TAB3P1-202ENST00000452645 1634 ntBASIC2.61□□□□□ -1.99
LMX1AQ8TE12 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
LMX1AQ8TE12 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
LMX1AQ8TE12 AC046144.1-201ENST00000478559 1853 ntBASIC2.61□□□□□ -1.99
LMX1AQ8TE12 NSRP1P1-201ENST00000444067 1693 ntBASIC2.61□□□□□ -1.99
LMX1AQ8TE12 METTL21EP-201ENST00000298105 713 ntBASIC2.61□□□□□ -1.99
LMX1AQ8TE12 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC2.61□□□□□ -1.99
LMX1AQ8TE12 RNU6-600P-201ENST00000362524 99 ntBASIC2.61□□□□□ -1.99
LMX1AQ8TE12 RNU6-1293P-201ENST00000384077 107 ntBASIC2.61□□□□□ -1.99
LMX1AQ8TE12 RNU6-98P-201ENST00000384173 107 ntBASIC2.61□□□□□ -1.99
LMX1AQ8TE12 AL451074.5-201ENST00000415894 435 ntBASIC2.61□□□□□ -1.99
LMX1AQ8TE12 TRIAP1P1-201ENST00000427062 225 ntBASIC2.61□□□□□ -1.99
LMX1AQ8TE12 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
LMX1AQ8TE12 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.61□□□□□ -1.99
LMX1AQ8TE12 TPTE2P6-202ENST00000445572 1007 ntBASIC2.61□□□□□ -1.99
LMX1AQ8TE12 RSL24D1P2-201ENST00000445584 366 ntBASIC2.61□□□□□ -1.99
LMX1AQ8TE12 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.61□□□□□ -1.99
LMX1AQ8TE12 AL513328.1-201ENST00000446460 224 ntBASIC2.61□□□□□ -1.99
LMX1AQ8TE12 FTH1P25-201ENST00000447665 469 ntBASIC2.61□□□□□ -1.99
LMX1AQ8TE12 AC090525.1-201ENST00000479116 478 ntBASIC2.61□□□□□ -1.99
LMX1AQ8TE12 AC012181.1-201ENST00000479895 423 ntBASIC2.61□□□□□ -1.99
LMX1AQ8TE12 AP004217.1-201ENST00000480579 346 ntBASIC2.61□□□□□ -1.99
LMX1AQ8TE12 MTCO1P31-201ENST00000506355 492 ntBASIC2.61□□□□□ -1.99
LMX1AQ8TE12 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.61□□□□□ -1.99
LMX1AQ8TE12 HAUS1P3-201ENST00000523909 662 ntBASIC2.61□□□□□ -1.99
LMX1AQ8TE12 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.61□□□□□ -1.99
LMX1AQ8TE12 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC2.61□□□□□ -1.99
LMX1AQ8TE12 CBX3P2-202ENST00000583365 535 ntBASIC2.61□□□□□ -1.99
LMX1AQ8TE12 AC083760.1-201ENST00000589621 670 ntBASIC2.61□□□□□ -1.99
LMX1AQ8TE12 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.61□□□□□ -1.99
LMX1AQ8TE12 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC2.61□□□□□ -1.99
LMX1AQ8TE12 SUMO2P14-201ENST00000604488 293 ntBASIC2.61□□□□□ -1.99
LMX1AQ8TE12 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC2.61□□□□□ -1.99
LMX1AQ8TE12 RNU6-156P-201ENST00000621869 107 ntBASIC2.61□□□□□ -1.99
LMX1AQ8TE12 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.61□□□□□ -1.99
LMX1AQ8TE12 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.61□□□□□ -1.99
LMX1AQ8TE12 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
LMX1AQ8TE12 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.61□□□□□ -1.99
LMX1AQ8TE12 AC233263.6-201ENST00000631132 1963 ntBASIC2.61□□□□□ -1.99
LMX1AQ8TE12 AC108206.1-201ENST00000570186 4159 ntBASIC2.61□□□□□ -1.99
LMX1AQ8TE12 AC002546.1-201ENST00000588041 2504 ntBASIC2.61□□□□□ -1.99
LMX1AQ8TE12 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
LMX1AQ8TE12 AC093831.2-201ENST00000624393 3427 ntBASIC2.6□□□□□ -1.99
LMX1AQ8TE12 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.6□□□□□ -1.99
LMX1AQ8TE12 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
LMX1AQ8TE12 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
LMX1AQ8TE12 AL512633.1-201ENST00000399931 655 ntBASIC2.6□□□□□ -1.99
LMX1AQ8TE12 RNU2-71P-201ENST00000411395 189 ntBASIC2.6□□□□□ -1.99
LMX1AQ8TE12 OR2B8P-201ENST00000432841 938 ntBASIC2.6□□□□□ -1.99
LMX1AQ8TE12 AL590103.1-201ENST00000434488 307 ntBASIC2.6□□□□□ -1.99
LMX1AQ8TE12 AC244505.4-201ENST00000434905 287 ntBASIC2.6□□□□□ -1.99
LMX1AQ8TE12 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC2.6□□□□□ -1.99
LMX1AQ8TE12 SSXP5-201ENST00000443473 287 ntBASIC2.6□□□□□ -1.99
LMX1AQ8TE12 HMGB1P48-201ENST00000446155 598 ntBASIC2.6□□□□□ -1.99
LMX1AQ8TE12 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC2.6□□□□□ -1.99
LMX1AQ8TE12 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC2.6□□□□□ -1.99
LMX1AQ8TE12 ARPC3P2-201ENST00000457786 533 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms