Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
RPS4Y2Q8TD47 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
RPS4Y2Q8TD47 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
RPS4Y2Q8TD47 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
RPS4Y2Q8TD47 AC109315.1-201ENST00000584143 1347 ntBASIC2.42□□□□□ -2.02
RPS4Y2Q8TD47 AP002907.1-201ENST00000606361 1430 ntBASIC2.42□□□□□ -2.02
RPS4Y2Q8TD47 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.42□□□□□ -2.02
RPS4Y2Q8TD47 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.42□□□□□ -2.02
RPS4Y2Q8TD47 OR5H2-201ENST00000355273 945 ntBASIC2.42□□□□□ -2.02
RPS4Y2Q8TD47 UBA52P6-201ENST00000399822 382 ntBASIC2.42□□□□□ -2.02
RPS4Y2Q8TD47 NDUFB4P4-201ENST00000404822 243 ntBASIC2.42□□□□□ -2.02
RPS4Y2Q8TD47 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC2.42□□□□□ -2.02
RPS4Y2Q8TD47 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC2.42□□□□□ -2.02
RPS4Y2Q8TD47 ZNF92P1Y-201ENST00000415010 1191 ntBASIC2.42□□□□□ -2.02
RPS4Y2Q8TD47 RPL7P44-201ENST00000424827 742 ntBASIC2.42□□□□□ -2.02
RPS4Y2Q8TD47 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.42□□□□□ -2.02
RPS4Y2Q8TD47 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.42□□□□□ -2.02
RPS4Y2Q8TD47 YWHAZP8-201ENST00000436935 731 ntBASIC2.42□□□□□ -2.02
RPS4Y2Q8TD47 RPL23AP74-201ENST00000437246 471 ntBASIC2.42□□□□□ -2.02
RPS4Y2Q8TD47 XKRY2-201ENST00000442362 1093 ntBASIC2.42□□□□□ -2.02
RPS4Y2Q8TD47 AC068135.1-201ENST00000446164 246 ntBASIC2.42□□□□□ -2.02
RPS4Y2Q8TD47 RPS24P6-201ENST00000452670 400 ntBASIC2.42□□□□□ -2.02
RPS4Y2Q8TD47 snoU13.3-201ENST00000459441 104 ntBASIC2.42□□□□□ -2.02
RPS4Y2Q8TD47 AL136126.1-201ENST00000473603 402 ntBASIC2.42□□□□□ -2.02
RPS4Y2Q8TD47 AC090525.1-201ENST00000479116 478 ntBASIC2.42□□□□□ -2.02
RPS4Y2Q8TD47 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC2.42□□□□□ -2.02
RPS4Y2Q8TD47 AC091826.1-201ENST00000514065 313 ntBASIC2.42□□□□□ -2.02
RPS4Y2Q8TD47 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.42□□□□□ -2.02
RPS4Y2Q8TD47 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.42□□□□□ -2.02
RPS4Y2Q8TD47 SNORD59.2-201ENST00000516873 68 ntBASIC2.42□□□□□ -2.02
RPS4Y2Q8TD47 AC090136.1-201ENST00000520009 240 ntBASIC2.42□□□□□ -2.02
RPS4Y2Q8TD47 SERPINE4P-201ENST00000554978 281 ntBASIC2.42□□□□□ -2.02
RPS4Y2Q8TD47 AC012414.2-201ENST00000559474 187 ntBASIC2.42□□□□□ -2.02
RPS4Y2Q8TD47 AL157394.1-201ENST00000562983 1224 ntBASIC2.42□□□□□ -2.02
RPS4Y2Q8TD47 AC090312.2-201ENST00000582687 378 ntBASIC2.42□□□□□ -2.02
RPS4Y2Q8TD47 MIR3670-2-201ENST00000582974 65 ntBASIC2.42□□□□□ -2.02
RPS4Y2Q8TD47 MIR3670-1-201ENST00000584160 65 ntBASIC2.42□□□□□ -2.02
RPS4Y2Q8TD47 MIR3670-3-201ENST00000584855 65 ntBASIC2.42□□□□□ -2.02
RPS4Y2Q8TD47 AL451007.1-201ENST00000595491 289 ntBASIC2.42□□□□□ -2.02
RPS4Y2Q8TD47 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.42□□□□□ -2.02
RPS4Y2Q8TD47 MIR3670-4-201ENST00000612260 65 ntBASIC2.42□□□□□ -2.02
RPS4Y2Q8TD47 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
RPS4Y2Q8TD47 AL161431.1-201ENST00000618966 4205 ntBASIC2.42□□□□□ -2.02
RPS4Y2Q8TD47 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
RPS4Y2Q8TD47 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
RPS4Y2Q8TD47 AC104446.1-201ENST00000613728 1321 ntBASIC2.42□□□□□ -2.02
RPS4Y2Q8TD47 ZNF90P1-201ENST00000480493 1951 ntBASIC2.41□□□□□ -2.02
RPS4Y2Q8TD47 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
RPS4Y2Q8TD47 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.41□□□□□ -2.02
RPS4Y2Q8TD47 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.41□□□□□ -2.02
RPS4Y2Q8TD47 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC2.41□□□□□ -2.02
RPS4Y2Q8TD47 RNU6-543P-201ENST00000362576 108 ntBASIC2.41□□□□□ -2.02
RPS4Y2Q8TD47 RNU6-7-201ENST00000364784 107 ntBASIC2.41□□□□□ -2.02
RPS4Y2Q8TD47 RNU6-8-201ENST00000365467 107 ntBASIC2.41□□□□□ -2.02
RPS4Y2Q8TD47 DEFB109C-201ENST00000382575 264 ntBASIC2.41□□□□□ -2.02
RPS4Y2Q8TD47 DEFB109B-201ENST00000382656 264 ntBASIC2.41□□□□□ -2.02
RPS4Y2Q8TD47 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
RPS4Y2Q8TD47 MIR1250-201ENST00000408098 113 ntBASIC2.41□□□□□ -2.02
RPS4Y2Q8TD47 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC2.41□□□□□ -2.02
RPS4Y2Q8TD47 AC244453.4-201ENST00000419150 388 ntBASIC2.41□□□□□ -2.02
RPS4Y2Q8TD47 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.41□□□□□ -2.02
RPS4Y2Q8TD47 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.41□□□□□ -2.02
RPS4Y2Q8TD47 AC112220.1-201ENST00000434628 355 ntBASIC2.41□□□□□ -2.02
RPS4Y2Q8TD47 ELOCP13-201ENST00000443934 329 ntBASIC2.41□□□□□ -2.02
RPS4Y2Q8TD47 NPM1P13-201ENST00000452663 865 ntBASIC2.41□□□□□ -2.02
RPS4Y2Q8TD47 AC008280.2-201ENST00000455473 307 ntBASIC2.41□□□□□ -2.02
RPS4Y2Q8TD47 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.41□□□□□ -2.02
RPS4Y2Q8TD47 AC008571.1-201ENST00000467232 300 ntBASIC2.41□□□□□ -2.02
RPS4Y2Q8TD47 RPS3AP14-201ENST00000483907 780 ntBASIC2.41□□□□□ -2.02
RPS4Y2Q8TD47 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.41□□□□□ -2.02
RPS4Y2Q8TD47 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC2.41□□□□□ -2.02
RPS4Y2Q8TD47 AC011825.1-201ENST00000484967 388 ntBASIC2.41□□□□□ -2.02
RPS4Y2Q8TD47 MTCO3P35-201ENST00000485582 781 ntBASIC2.41□□□□□ -2.02
RPS4Y2Q8TD47 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
RPS4Y2Q8TD47 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.41□□□□□ -2.02
RPS4Y2Q8TD47 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.41□□□□□ -2.02
RPS4Y2Q8TD47 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC2.41□□□□□ -2.02
RPS4Y2Q8TD47 HMGB1P41-201ENST00000520234 440 ntBASIC2.41□□□□□ -2.02
RPS4Y2Q8TD47 AP004371.1-201ENST00000525240 214 ntBASIC2.41□□□□□ -2.02
RPS4Y2Q8TD47 RGS4-207ENST00000527809 817 ntTSL 4 BASIC2.41□□□□□ -2.02
RPS4Y2Q8TD47 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC2.41□□□□□ -2.02
RPS4Y2Q8TD47 AC109635.4-202ENST00000531666 412 ntBASIC2.41□□□□□ -2.02
RPS4Y2Q8TD47 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.41□□□□□ -2.02
RPS4Y2Q8TD47 AC004486.1-201ENST00000546846 233 ntBASIC2.41□□□□□ -2.02
RPS4Y2Q8TD47 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.41□□□□□ -2.02
RPS4Y2Q8TD47 AL121603.1-201ENST00000553815 142 ntBASIC2.41□□□□□ -2.02
RPS4Y2Q8TD47 OR4G1P-201ENST00000588632 938 ntBASIC2.41□□□□□ -2.02
RPS4Y2Q8TD47 AC024153.1-201ENST00000603103 365 ntBASIC2.41□□□□□ -2.02
RPS4Y2Q8TD47 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.41□□□□□ -2.02
RPS4Y2Q8TD47 AL359198.2-201ENST00000611836 194 ntBASIC2.41□□□□□ -2.02
RPS4Y2Q8TD47 U73479.1-201ENST00000618062 168 ntBASIC2.41□□□□□ -2.02
RPS4Y2Q8TD47 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
RPS4Y2Q8TD47 Z82195.2-201ENST00000612348 18351 ntBASIC2.4□□□□□ -2.02
RPS4Y2Q8TD47 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
RPS4Y2Q8TD47 RNU1-100P-201ENST00000365255 165 ntBASIC2.4□□□□□ -2.03
RPS4Y2Q8TD47 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.4□□□□□ -2.03
RPS4Y2Q8TD47 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
RPS4Y2Q8TD47 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
RPS4Y2Q8TD47 DSTNP4-201ENST00000399472 474 ntBASIC2.4□□□□□ -2.03
RPS4Y2Q8TD47 SFR1P1-201ENST00000403720 688 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 136.5 ms