Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC89Q8N998 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.94□□□□□ -1.78
CCDC89Q8N998 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CCDC89Q8N998 Y_RNA.192-201ENST00000363977 102 ntBASIC3.94□□□□□ -1.78
CCDC89Q8N998 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
CCDC89Q8N998 RPL23AP29-201ENST00000397284 453 ntBASIC3.94□□□□□ -1.78
CCDC89Q8N998 RPS3AP24-201ENST00000407896 734 ntBASIC3.94□□□□□ -1.78
CCDC89Q8N998 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.94□□□□□ -1.78
CCDC89Q8N998 RNA5SP38-201ENST00000410750 119 ntBASIC3.94□□□□□ -1.78
CCDC89Q8N998 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC89Q8N998 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC89Q8N998 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC89Q8N998 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.94□□□□□ -1.78
CCDC89Q8N998 AC092648.1-201ENST00000425870 423 ntBASIC3.94□□□□□ -1.78
CCDC89Q8N998 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC89Q8N998 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.94□□□□□ -1.78
CCDC89Q8N998 AC010655.1-201ENST00000449336 292 ntBASIC3.94□□□□□ -1.78
CCDC89Q8N998 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
CCDC89Q8N998 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC89Q8N998 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC89Q8N998 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC89Q8N998 UBE2V1P12-201ENST00000503954 474 ntBASIC3.94□□□□□ -1.78
CCDC89Q8N998 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC89Q8N998 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.94□□□□□ -1.78
CCDC89Q8N998 TXNP6-201ENST00000510190 310 ntBASIC3.94□□□□□ -1.78
CCDC89Q8N998 NDUFA5P2-201ENST00000519723 344 ntBASIC3.94□□□□□ -1.78
CCDC89Q8N998 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC89Q8N998 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC89Q8N998 OR6C7P-201ENST00000547875 934 ntBASIC3.94□□□□□ -1.78
CCDC89Q8N998 CYCSP2-201ENST00000558168 301 ntBASIC3.94□□□□□ -1.78
CCDC89Q8N998 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC3.94□□□□□ -1.78
CCDC89Q8N998 AC011260.1-201ENST00000578420 472 ntBASIC3.94□□□□□ -1.78
CCDC89Q8N998 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC89Q8N998 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.94□□□□□ -1.78
CCDC89Q8N998 RNU4-5P-201ENST00000607255 135 ntBASIC3.94□□□□□ -1.78
CCDC89Q8N998 AL133445.2-201ENST00000611191 527 ntBASIC3.94□□□□□ -1.78
CCDC89Q8N998 MLECP1-201ENST00000615893 709 ntBASIC3.94□□□□□ -1.78
CCDC89Q8N998 MIR6130-201ENST00000619419 109 ntBASIC3.94□□□□□ -1.78
CCDC89Q8N998 U7.8-201ENST00000619968 63 ntBASIC3.94□□□□□ -1.78
CCDC89Q8N998 AC002550.2-201ENST00000621246 394 ntBASIC3.94□□□□□ -1.78
CCDC89Q8N998 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.94□□□□□ -1.78
CCDC89Q8N998 OR52H1-202ENST00000641796 1061 ntBASIC3.94□□□□□ -1.78
CCDC89Q8N998 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
CCDC89Q8N998 RLIMP1-201ENST00000339626 1680 ntBASIC3.94□□□□□ -1.78
CCDC89Q8N998 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
CCDC89Q8N998 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.93□□□□□ -1.78
CCDC89Q8N998 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
CCDC89Q8N998 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC89Q8N998 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC89Q8N998 RNU4-92P-201ENST00000363783 136 ntBASIC3.93□□□□□ -1.78
CCDC89Q8N998 Y_RNA.234-201ENST00000364409 97 ntBASIC3.93□□□□□ -1.78
CCDC89Q8N998 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC89Q8N998 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC3.93□□□□□ -1.78
CCDC89Q8N998 RPS26P8-201ENST00000393490 348 ntBASIC3.93□□□□□ -1.78
CCDC89Q8N998 AL022722.2-201ENST00000402519 180 ntBASIC3.93□□□□□ -1.78
CCDC89Q8N998 RPL21P65-201ENST00000406094 466 ntBASIC3.93□□□□□ -1.78
CCDC89Q8N998 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC89Q8N998 MRPL50P2-201ENST00000416821 482 ntBASIC3.93□□□□□ -1.78
CCDC89Q8N998 OR8F1P-201ENST00000425243 930 ntBASIC3.93□□□□□ -1.78
CCDC89Q8N998 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC89Q8N998 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC89Q8N998 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC89Q8N998 AC140076.1-201ENST00000449897 361 ntBASIC3.93□□□□□ -1.78
CCDC89Q8N998 AC092155.2-201ENST00000454675 477 ntBASIC3.93□□□□□ -1.78
CCDC89Q8N998 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.93□□□□□ -1.78
CCDC89Q8N998 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC89Q8N998 AL049714.1-201ENST00000466686 347 ntBASIC3.93□□□□□ -1.78
CCDC89Q8N998 AC006463.2-201ENST00000473326 348 ntBASIC3.93□□□□□ -1.78
CCDC89Q8N998 RPL32P34-201ENST00000486380 400 ntBASIC3.93□□□□□ -1.78
CCDC89Q8N998 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC89Q8N998 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC89Q8N998 RNU6-150P-201ENST00000516237 95 ntBASIC3.93□□□□□ -1.78
CCDC89Q8N998 RNU6-528P-201ENST00000516926 100 ntBASIC3.93□□□□□ -1.78
CCDC89Q8N998 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.93□□□□□ -1.78
CCDC89Q8N998 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.93□□□□□ -1.78
CCDC89Q8N998 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC89Q8N998 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC89Q8N998 AC069366.1-201ENST00000583159 838 ntBASIC3.93□□□□□ -1.78
CCDC89Q8N998 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC89Q8N998 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.93□□□□□ -1.78
CCDC89Q8N998 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC89Q8N998 AC006270.3-201ENST00000605967 1036 ntBASIC3.93□□□□□ -1.78
CCDC89Q8N998 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.93□□□□□ -1.78
CCDC89Q8N998 AL450472.3-201ENST00000615578 367 ntBASIC3.93□□□□□ -1.78
CCDC89Q8N998 AL138880.2-201ENST00000616214 239 ntBASIC3.93□□□□□ -1.78
CCDC89Q8N998 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC89Q8N998 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
CCDC89Q8N998 AC005832.2-201ENST00000538921 1430 ntBASIC3.93□□□□□ -1.78
CCDC89Q8N998 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.93□□□□□ -1.78
CCDC89Q8N998 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC89Q8N998 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.93□□□□□ -1.78
CCDC89Q8N998 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC89Q8N998 AC110774.1-201ENST00000623567 2018 ntBASIC3.92□□□□□ -1.78
CCDC89Q8N998 AL021368.2-201ENST00000606125 5352 ntBASIC3.92□□□□□ -1.78
CCDC89Q8N998 AL161781.1-201ENST00000354277 403 ntBASIC3.92□□□□□ -1.78
CCDC89Q8N998 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC89Q8N998 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC89Q8N998 SKINT1L-201ENST00000401057 817 ntBASIC3.92□□□□□ -1.78
CCDC89Q8N998 MIR937-201ENST00000401271 86 ntBASIC3.92□□□□□ -1.78
CCDC89Q8N998 AL356095.1-201ENST00000417217 199 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms