Protein–RNA interactions for Protein: Q8N4P3

HDDC3, Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3Q8N4P3 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HDDC3Q8N4P3 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.56□□□□□ -1.84
HDDC3Q8N4P3 AC091946.2-201ENST00000606105 291 ntBASIC3.56□□□□□ -1.84
HDDC3Q8N4P3 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.56□□□□□ -1.84
HDDC3Q8N4P3 AL110115.1-201ENST00000614396 364 ntBASIC3.56□□□□□ -1.84
HDDC3Q8N4P3 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.56□□□□□ -1.84
HDDC3Q8N4P3 AC244205.2-202ENST00000635781 342 ntBASIC3.56□□□□□ -1.84
HDDC3Q8N4P3 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
HDDC3Q8N4P3 AL732372.2-225ENST00000642124 456 ntBASIC3.56□□□□□ -1.84
HDDC3Q8N4P3 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
HDDC3Q8N4P3 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HDDC3Q8N4P3 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.55□□□□□ -1.84
HDDC3Q8N4P3 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
HDDC3Q8N4P3 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HDDC3Q8N4P3 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.55□□□□□ -1.84
HDDC3Q8N4P3 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HDDC3Q8N4P3 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HDDC3Q8N4P3 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HDDC3Q8N4P3 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HDDC3Q8N4P3 SUGT1P1-201ENST00000379514 476 ntBASIC3.55□□□□□ -1.84
HDDC3Q8N4P3 Z98941.1-201ENST00000407764 100 ntBASIC3.55□□□□□ -1.84
HDDC3Q8N4P3 AC012065.2-201ENST00000421295 375 ntBASIC3.55□□□□□ -1.84
HDDC3Q8N4P3 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.55□□□□□ -1.84
HDDC3Q8N4P3 VN1R10P-201ENST00000447106 875 ntBASIC3.55□□□□□ -1.84
HDDC3Q8N4P3 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HDDC3Q8N4P3 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.55□□□□□ -1.84
HDDC3Q8N4P3 AL389895.1-201ENST00000554127 252 ntBASIC3.55□□□□□ -1.84
HDDC3Q8N4P3 AL391156.1-201ENST00000554965 554 ntBASIC3.55□□□□□ -1.84
HDDC3Q8N4P3 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.55□□□□□ -1.84
HDDC3Q8N4P3 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.55□□□□□ -1.84
HDDC3Q8N4P3 AL133457.1-201ENST00000564251 987 ntBASIC3.55□□□□□ -1.84
HDDC3Q8N4P3 AC104072.1-201ENST00000568817 668 ntBASIC3.55□□□□□ -1.84
HDDC3Q8N4P3 FAM60BP-201ENST00000578364 658 ntBASIC3.55□□□□□ -1.84
HDDC3Q8N4P3 MIR5708-201ENST00000579723 85 ntBASIC3.55□□□□□ -1.84
HDDC3Q8N4P3 COX6CP3-201ENST00000580869 223 ntBASIC3.55□□□□□ -1.84
HDDC3Q8N4P3 AC012493.2-201ENST00000595083 291 ntBASIC3.55□□□□□ -1.84
HDDC3Q8N4P3 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.55□□□□□ -1.84
HDDC3Q8N4P3 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.55□□□□□ -1.84
HDDC3Q8N4P3 AC124016.2-201ENST00000610058 665 ntBASIC3.55□□□□□ -1.84
HDDC3Q8N4P3 AL512427.1-201ENST00000618593 349 ntBASIC3.55□□□□□ -1.84
HDDC3Q8N4P3 MIR6852-201ENST00000621699 66 ntBASIC3.55□□□□□ -1.84
HDDC3Q8N4P3 AL157770.1-201ENST00000623049 439 ntBASIC3.55□□□□□ -1.84
HDDC3Q8N4P3 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.55□□□□□ -1.84
HDDC3Q8N4P3 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HDDC3Q8N4P3 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HDDC3Q8N4P3 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.55□□□□□ -1.84
HDDC3Q8N4P3 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HDDC3Q8N4P3 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HDDC3Q8N4P3 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HDDC3Q8N4P3 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HDDC3Q8N4P3 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HDDC3Q8N4P3 AL136520.1-201ENST00000600311 1322 ntBASIC3.54□□□□□ -1.84
HDDC3Q8N4P3 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.54□□□□□ -1.84
HDDC3Q8N4P3 ANKRD36P1-201ENST00000344424 659 ntBASIC3.54□□□□□ -1.84
HDDC3Q8N4P3 FRG1CP-201ENST00000358464 769 ntBASIC3.54□□□□□ -1.84
HDDC3Q8N4P3 RNU1-18P-201ENST00000363062 164 ntBASIC3.54□□□□□ -1.84
HDDC3Q8N4P3 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.54□□□□□ -1.84
HDDC3Q8N4P3 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
HDDC3Q8N4P3 SNORD51-201ENST00000384320 80 ntBASIC3.54□□□□□ -1.84
HDDC3Q8N4P3 RNU6-878P-201ENST00000384578 110 ntBASIC3.54□□□□□ -1.84
HDDC3Q8N4P3 SNORD17-201ENST00000390930 237 ntBASIC3.54□□□□□ -1.84
HDDC3Q8N4P3 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HDDC3Q8N4P3 ARF4P3-201ENST00000397387 509 ntBASIC3.54□□□□□ -1.84
HDDC3Q8N4P3 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.54□□□□□ -1.84
HDDC3Q8N4P3 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.54□□□□□ -1.84
HDDC3Q8N4P3 HMGB3P23-201ENST00000414981 585 ntBASIC3.54□□□□□ -1.84
HDDC3Q8N4P3 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.54□□□□□ -1.84
HDDC3Q8N4P3 SEPT7P5-201ENST00000434048 306 ntBASIC3.54□□□□□ -1.84
HDDC3Q8N4P3 AP000949.1-201ENST00000438328 629 ntBASIC3.54□□□□□ -1.84
HDDC3Q8N4P3 AL831737.1-201ENST00000441288 271 ntBASIC3.54□□□□□ -1.84
HDDC3Q8N4P3 AL445669.2-201ENST00000454425 421 ntBASIC3.54□□□□□ -1.84
HDDC3Q8N4P3 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.54□□□□□ -1.84
HDDC3Q8N4P3 SNORA31.8-201ENST00000516327 108 ntBASIC3.54□□□□□ -1.84
HDDC3Q8N4P3 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.54□□□□□ -1.84
HDDC3Q8N4P3 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.54□□□□□ -1.84
HDDC3Q8N4P3 AC087897.1-201ENST00000550134 156 ntBASIC3.54□□□□□ -1.84
HDDC3Q8N4P3 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.54□□□□□ -1.84
HDDC3Q8N4P3 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.54□□□□□ -1.84
HDDC3Q8N4P3 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.54□□□□□ -1.84
HDDC3Q8N4P3 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.54□□□□□ -1.84
HDDC3Q8N4P3 AC090666.1-201ENST00000578241 445 ntBASIC3.54□□□□□ -1.84
HDDC3Q8N4P3 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.54□□□□□ -1.84
HDDC3Q8N4P3 AC006254.3-201ENST00000603353 884 ntBASIC3.54□□□□□ -1.84
HDDC3Q8N4P3 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.54□□□□□ -1.84
HDDC3Q8N4P3 AP002802.2-201ENST00000605877 235 ntBASIC3.54□□□□□ -1.84
HDDC3Q8N4P3 AC068831.7-201ENST00000616954 363 ntBASIC3.54□□□□□ -1.84
HDDC3Q8N4P3 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HDDC3Q8N4P3 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HDDC3Q8N4P3 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.53□□□□□ -1.84
HDDC3Q8N4P3 RPS4XP5-202ENST00000449995 1334 ntBASIC3.53□□□□□ -1.84
HDDC3Q8N4P3 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HDDC3Q8N4P3 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HDDC3Q8N4P3 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HDDC3Q8N4P3 RNU6-173P-201ENST00000364215 104 ntBASIC3.53□□□□□ -1.84
HDDC3Q8N4P3 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HDDC3Q8N4P3 HSFY4P-201ENST00000415994 1181 ntBASIC3.53□□□□□ -1.84
HDDC3Q8N4P3 GLRXP1-201ENST00000423261 334 ntBASIC3.53□□□□□ -1.84
HDDC3Q8N4P3 AC005300.1-201ENST00000428401 373 ntBASIC3.53□□□□□ -1.84
HDDC3Q8N4P3 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.53□□□□□ -1.84
HDDC3Q8N4P3 HIGD1AP11-201ENST00000438361 280 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 141.6 ms