Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.38□□□□□ -1.87
VPS8Q8N3P4 DPH3P2-201ENST00000422618 250 ntBASIC3.38□□□□□ -1.87
VPS8Q8N3P4 WASF1P1-201ENST00000447560 1131 ntBASIC3.38□□□□□ -1.87
VPS8Q8N3P4 RPL30P9-201ENST00000465586 330 ntBASIC3.38□□□□□ -1.87
VPS8Q8N3P4 UBL5P3-201ENST00000475112 231 ntBASIC3.38□□□□□ -1.87
VPS8Q8N3P4 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.38□□□□□ -1.87
VPS8Q8N3P4 RNA5SP402-201ENST00000517148 110 ntBASIC3.38□□□□□ -1.87
VPS8Q8N3P4 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
VPS8Q8N3P4 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.38□□□□□ -1.87
VPS8Q8N3P4 AL442163.2-201ENST00000553912 710 ntBASIC3.38□□□□□ -1.87
VPS8Q8N3P4 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.38□□□□□ -1.87
VPS8Q8N3P4 AC123786.2-201ENST00000603459 275 ntBASIC3.38□□□□□ -1.87
VPS8Q8N3P4 AC098826.3-201ENST00000603823 466 ntBASIC3.38□□□□□ -1.87
VPS8Q8N3P4 AC073387.2-201ENST00000604797 784 ntBASIC3.38□□□□□ -1.87
VPS8Q8N3P4 AC103710.1-201ENST00000610003 901 ntBASIC3.38□□□□□ -1.87
VPS8Q8N3P4 MIR6132-201ENST00000622083 109 ntBASIC3.38□□□□□ -1.87
VPS8Q8N3P4 CFTRP2-201ENST00000634304 199 ntBASIC3.38□□□□□ -1.87
VPS8Q8N3P4 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
VPS8Q8N3P4 RNA5SP181-201ENST00000410246 98 ntBASIC3.37□□□□□ -1.87
VPS8Q8N3P4 AC073310.1-201ENST00000423226 1033 ntBASIC3.37□□□□□ -1.87
VPS8Q8N3P4 BX276092.3-201ENST00000424182 230 ntBASIC3.37□□□□□ -1.87
VPS8Q8N3P4 Z98742.2-201ENST00000431564 187 ntBASIC3.37□□□□□ -1.87
VPS8Q8N3P4 AP000889.2-201ENST00000532684 490 ntBASIC3.37□□□□□ -1.87
VPS8Q8N3P4 AC084757.1-201ENST00000559987 490 ntBASIC3.37□□□□□ -1.87
VPS8Q8N3P4 AL392112.1-201ENST00000605115 829 ntBASIC3.37□□□□□ -1.87
VPS8Q8N3P4 AL359198.2-201ENST00000611836 194 ntBASIC3.37□□□□□ -1.87
VPS8Q8N3P4 AL136981.2-201ENST00000617319 734 ntBASIC3.37□□□□□ -1.87
VPS8Q8N3P4 AL356266.1-201ENST00000623311 483 ntBASIC3.37□□□□□ -1.87
VPS8Q8N3P4 AC241585.2-209ENST00000638217 143 ntBASIC3.37□□□□□ -1.87
VPS8Q8N3P4 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.37□□□□□ -1.87
VPS8Q8N3P4 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.37□□□□□ -1.87
VPS8Q8N3P4 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
VPS8Q8N3P4 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
VPS8Q8N3P4 MIR764-201ENST00000390811 85 ntBASIC3.36□□□□□ -1.87
VPS8Q8N3P4 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.36□□□□□ -1.87
VPS8Q8N3P4 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
VPS8Q8N3P4 AL137014.1-201ENST00000420490 1226 ntBASIC3.36□□□□□ -1.87
VPS8Q8N3P4 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.36□□□□□ -1.87
VPS8Q8N3P4 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.36□□□□□ -1.87
VPS8Q8N3P4 SDR42E1P3-201ENST00000438345 502 ntBASIC3.36□□□□□ -1.87
VPS8Q8N3P4 CASP3P1-201ENST00000446037 609 ntBASIC3.36□□□□□ -1.87
VPS8Q8N3P4 AC027673.1-201ENST00000456245 405 ntBASIC3.36□□□□□ -1.87
VPS8Q8N3P4 ATG10-AS1-201ENST00000504846 648 ntBASIC3.36□□□□□ -1.87
VPS8Q8N3P4 KLHL2P1-201ENST00000508691 521 ntBASIC3.36□□□□□ -1.87
VPS8Q8N3P4 RPL7L1P13-201ENST00000511702 739 ntBASIC3.36□□□□□ -1.87
VPS8Q8N3P4 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.36□□□□□ -1.87
VPS8Q8N3P4 MIR4458-201ENST00000578872 75 ntBASIC3.36□□□□□ -1.87
VPS8Q8N3P4 MIR5002-201ENST00000584713 97 ntBASIC3.36□□□□□ -1.87
VPS8Q8N3P4 CU459211.1-201ENST00000635667 749 ntBASIC3.36□□□□□ -1.87
VPS8Q8N3P4 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
VPS8Q8N3P4 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.36□□□□□ -1.87
VPS8Q8N3P4 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
VPS8Q8N3P4 RPL21P132-201ENST00000331267 462 ntBASIC3.36□□□□□ -1.87
VPS8Q8N3P4 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.36□□□□□ -1.87
VPS8Q8N3P4 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.36□□□□□ -1.87
VPS8Q8N3P4 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.36□□□□□ -1.87
VPS8Q8N3P4 RPL34P26-201ENST00000445636 354 ntBASIC3.36□□□□□ -1.87
VPS8Q8N3P4 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.36□□□□□ -1.87
VPS8Q8N3P4 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.36□□□□□ -1.87
VPS8Q8N3P4 AL158827.2-201ENST00000602494 330 ntBASIC3.36□□□□□ -1.87
VPS8Q8N3P4 AC025811.1-201ENST00000604312 472 ntBASIC3.36□□□□□ -1.87
VPS8Q8N3P4 AC004943.3-201ENST00000624116 600 ntBASIC3.36□□□□□ -1.87
VPS8Q8N3P4 AL691447.3-201ENST00000635020 330 ntBASIC3.36□□□□□ -1.87
VPS8Q8N3P4 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
VPS8Q8N3P4 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.35□□□□□ -1.87
VPS8Q8N3P4 AP001486.2-201ENST00000561652 5113 ntBASIC3.35□□□□□ -1.87
VPS8Q8N3P4 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
VPS8Q8N3P4 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
VPS8Q8N3P4 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
VPS8Q8N3P4 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
VPS8Q8N3P4 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
VPS8Q8N3P4 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
VPS8Q8N3P4 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.35□□□□□ -1.87
VPS8Q8N3P4 MTND4LP13-201ENST00000425022 298 ntBASIC3.35□□□□□ -1.87
VPS8Q8N3P4 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.35□□□□□ -1.87
VPS8Q8N3P4 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.35□□□□□ -1.87
VPS8Q8N3P4 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.35□□□□□ -1.87
VPS8Q8N3P4 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.35□□□□□ -1.87
VPS8Q8N3P4 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.35□□□□□ -1.87
VPS8Q8N3P4 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3.35□□□□□ -1.87
VPS8Q8N3P4 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
VPS8Q8N3P4 SEPT7P7-201ENST00000420492 1301 ntBASIC3.34□□□□□ -1.87
VPS8Q8N3P4 MTND4P13-201ENST00000402078 1023 ntBASIC3.34□□□□□ -1.88
VPS8Q8N3P4 CYCSP45-201ENST00000402289 315 ntBASIC3.34□□□□□ -1.88
VPS8Q8N3P4 RN7SKP32-201ENST00000410167 303 ntBASIC3.34□□□□□ -1.88
VPS8Q8N3P4 AF274854.1-201ENST00000413236 615 ntBASIC3.34□□□□□ -1.88
VPS8Q8N3P4 OR51A3P-201ENST00000413596 924 ntBASIC3.34□□□□□ -1.88
VPS8Q8N3P4 RAD23BP2-201ENST00000416003 1207 ntBASIC3.34□□□□□ -1.88
VPS8Q8N3P4 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.34□□□□□ -1.88
VPS8Q8N3P4 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.34□□□□□ -1.88
VPS8Q8N3P4 CR769767.1-201ENST00000436337 346 ntBASIC3.34□□□□□ -1.88
VPS8Q8N3P4 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.34□□□□□ -1.88
VPS8Q8N3P4 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.34□□□□□ -1.88
VPS8Q8N3P4 AL445669.2-201ENST00000454425 421 ntBASIC3.34□□□□□ -1.88
VPS8Q8N3P4 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.34□□□□□ -1.88
VPS8Q8N3P4 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC3.34□□□□□ -1.88
VPS8Q8N3P4 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.34□□□□□ -1.88
VPS8Q8N3P4 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.34□□□□□ -1.88
VPS8Q8N3P4 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.34□□□□□ -1.88
VPS8Q8N3P4 AF127577.6-201ENST00000623352 2191 ntBASIC3.34□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms