Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.82□□□□□ -1.8
CLIP4Q8N3C7 TVP23BP1-201ENST00000557500 617 ntBASIC3.82□□□□□ -1.8
CLIP4Q8N3C7 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.82□□□□□ -1.8
CLIP4Q8N3C7 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.82□□□□□ -1.8
CLIP4Q8N3C7 AL161729.3-201ENST00000603533 673 ntBASIC3.82□□□□□ -1.8
CLIP4Q8N3C7 AC098614.4-201ENST00000607601 462 ntBASIC3.82□□□□□ -1.8
CLIP4Q8N3C7 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.82□□□□□ -1.8
CLIP4Q8N3C7 AC007684.1-201ENST00000609671 477 ntBASIC3.82□□□□□ -1.8
CLIP4Q8N3C7 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.82□□□□□ -1.8
CLIP4Q8N3C7 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC3.82□□□□□ -1.8
CLIP4Q8N3C7 CRYM-AS1-204ENST00000637983 556 ntBASIC3.82□□□□□ -1.8
CLIP4Q8N3C7 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.82□□□□□ -1.8
CLIP4Q8N3C7 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CLIP4Q8N3C7 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CLIP4Q8N3C7 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CLIP4Q8N3C7 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
CLIP4Q8N3C7 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 Z73965.1-201ENST00000623412 2297 ntBASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 RPS4XP5-202ENST00000449995 1334 ntBASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 RNU6-777P-201ENST00000364265 104 ntBASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 MIR585-201ENST00000384887 94 ntBASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 Y_RNA.598-201ENST00000410480 95 ntBASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 USP9YP13-201ENST00000417797 480 ntBASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 AIMP1P1-201ENST00000418670 937 ntBASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 SAGE2P-201ENST00000420011 2126 ntBASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 RPL23AP16-201ENST00000441715 421 ntBASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 AL022238.1-201ENST00000442557 355 ntBASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 AC244505.5-201ENST00000443639 207 ntBASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 GDI2P2-201ENST00000445131 608 ntBASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 MTND1P1-201ENST00000445453 368 ntBASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 MTND4P18-201ENST00000447010 465 ntBASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 USP9YP12-201ENST00000450481 570 ntBASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 AC093392.2-201ENST00000450682 337 ntBASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 SNRPFP4-201ENST00000456366 242 ntBASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 RNU7-136P-201ENST00000458819 69 ntBASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 RPS7P7-201ENST00000463499 571 ntBASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 RN7SL738P-201ENST00000470264 297 ntBASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 RPS15AP17-201ENST00000470598 390 ntBASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 RN7SL459P-201ENST00000481078 302 ntBASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 AL358832.1-201ENST00000497800 389 ntBASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 AC093809.1-201ENST00000509155 340 ntBASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 AC068587.4-201ENST00000533893 186 ntBASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 HSPE1P3-201ENST00000559254 309 ntBASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 AGGF1P8-201ENST00000562979 1000 ntBASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 RPL23AP87-202ENST00000573039 466 ntBASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 AC022655.2-201ENST00000577280 318 ntBASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 MIR5697-201ENST00000578045 78 ntBASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 MIR544B-201ENST00000582372 78 ntBASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 AC068790.4-201ENST00000602474 263 ntBASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 AL356218.2-201ENST00000605264 187 ntBASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 uc_338.32-201ENST00000615087 172 ntBASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 AC011944.2-201ENST00000624440 683 ntBASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 U6.101-201ENST00000637707 76 ntBASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 ERCC6-202ENST00000374127 1782 ntBASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CLIP4Q8N3C7 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLIP4Q8N3C7 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLIP4Q8N3C7 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLIP4Q8N3C7 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CLIP4Q8N3C7 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLIP4Q8N3C7 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.8□□□□□ -1.8
CLIP4Q8N3C7 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.8□□□□□ -1.8
CLIP4Q8N3C7 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.8□□□□□ -1.8
CLIP4Q8N3C7 RNU6-289P-201ENST00000364093 107 ntBASIC3.8□□□□□ -1.8
CLIP4Q8N3C7 RNA5SP509-201ENST00000364577 119 ntBASIC3.8□□□□□ -1.8
CLIP4Q8N3C7 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.8□□□□□ -1.8
CLIP4Q8N3C7 RNU5A-6P-201ENST00000384136 116 ntBASIC3.8□□□□□ -1.8
CLIP4Q8N3C7 Y_RNA.582-201ENST00000391023 95 ntBASIC3.8□□□□□ -1.8
CLIP4Q8N3C7 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CLIP4Q8N3C7 MIR548F1-201ENST00000408667 84 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms