Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.31□□□□□ -1.72
HERC6Q8IVU3 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.31□□□□□ -1.72
HERC6Q8IVU3 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
HERC6Q8IVU3 RNU6-263P-201ENST00000363811 107 ntBASIC4.31□□□□□ -1.72
HERC6Q8IVU3 SNORD74.4-201ENST00000364129 80 ntBASIC4.31□□□□□ -1.72
HERC6Q8IVU3 Y_RNA.302-201ENST00000364997 102 ntBASIC4.31□□□□□ -1.72
HERC6Q8IVU3 RNA5SP97-201ENST00000365006 84 ntBASIC4.31□□□□□ -1.72
HERC6Q8IVU3 RNU6-952P-201ENST00000391164 108 ntBASIC4.31□□□□□ -1.72
HERC6Q8IVU3 U3.29-201ENST00000391296 212 ntBASIC4.31□□□□□ -1.72
HERC6Q8IVU3 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HERC6Q8IVU3 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC4.31□□□□□ -1.72
HERC6Q8IVU3 Z97055.1-201ENST00000419730 712 ntBASIC4.31□□□□□ -1.72
HERC6Q8IVU3 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.31□□□□□ -1.72
HERC6Q8IVU3 AC092832.1-201ENST00000422934 400 ntBASIC4.31□□□□□ -1.72
HERC6Q8IVU3 AP000907.1-201ENST00000428428 510 ntBASIC4.31□□□□□ -1.72
HERC6Q8IVU3 MTND1P20-201ENST00000430341 950 ntBASIC4.31□□□□□ -1.72
HERC6Q8IVU3 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.31□□□□□ -1.72
HERC6Q8IVU3 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HERC6Q8IVU3 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.31□□□□□ -1.72
HERC6Q8IVU3 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC4.31□□□□□ -1.72
HERC6Q8IVU3 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.31□□□□□ -1.72
HERC6Q8IVU3 RPL31P50-201ENST00000471002 296 ntBASIC4.31□□□□□ -1.72
HERC6Q8IVU3 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.31□□□□□ -1.72
HERC6Q8IVU3 PPIAP15-201ENST00000479662 484 ntBASIC4.31□□□□□ -1.72
HERC6Q8IVU3 UBE2CP3-201ENST00000502715 450 ntBASIC4.31□□□□□ -1.72
HERC6Q8IVU3 COX7A2P2-201ENST00000505291 250 ntBASIC4.31□□□□□ -1.72
HERC6Q8IVU3 NDUFA5P2-201ENST00000519723 344 ntBASIC4.31□□□□□ -1.72
HERC6Q8IVU3 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.31□□□□□ -1.72
HERC6Q8IVU3 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC4.31□□□□□ -1.72
HERC6Q8IVU3 AC090281.1-201ENST00000523019 276 ntBASIC4.31□□□□□ -1.72
HERC6Q8IVU3 AC068587.4-201ENST00000533893 186 ntBASIC4.31□□□□□ -1.72
HERC6Q8IVU3 OR6C7P-201ENST00000547875 934 ntBASIC4.31□□□□□ -1.72
HERC6Q8IVU3 AC037471.2-201ENST00000564941 598 ntBASIC4.31□□□□□ -1.72
HERC6Q8IVU3 AC109446.2-201ENST00000567872 497 ntBASIC4.31□□□□□ -1.72
HERC6Q8IVU3 RPL23AP87-202ENST00000573039 466 ntBASIC4.31□□□□□ -1.72
HERC6Q8IVU3 AC136618.2-201ENST00000575091 400 ntBASIC4.31□□□□□ -1.72
HERC6Q8IVU3 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.31□□□□□ -1.72
HERC6Q8IVU3 AL049634.3-201ENST00000604968 457 ntBASIC4.31□□□□□ -1.72
HERC6Q8IVU3 AC055876.5-201ENST00000605667 259 ntBASIC4.31□□□□□ -1.72
HERC6Q8IVU3 AC011816.2-201ENST00000607089 556 ntBASIC4.31□□□□□ -1.72
HERC6Q8IVU3 U3.45-201ENST00000607547 219 ntBASIC4.31□□□□□ -1.72
HERC6Q8IVU3 AL442067.2-201ENST00000614033 363 ntBASIC4.31□□□□□ -1.72
HERC6Q8IVU3 AC026368.1-201ENST00000614934 690 ntBASIC4.31□□□□□ -1.72
HERC6Q8IVU3 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.31□□□□□ -1.72
HERC6Q8IVU3 AL356596.1-201ENST00000624230 379 ntBASIC4.31□□□□□ -1.72
HERC6Q8IVU3 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC4.31□□□□□ -1.72
HERC6Q8IVU3 AC099063.3-201ENST00000642066 185 ntBASIC4.31□□□□□ -1.72
HERC6Q8IVU3 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HERC6Q8IVU3 AC011266.1-201ENST00000624119 3569 ntBASIC4.31□□□□□ -1.72
HERC6Q8IVU3 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
HERC6Q8IVU3 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
HERC6Q8IVU3 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HERC6Q8IVU3 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
HERC6Q8IVU3 MTCO1P12-201ENST00000414273 1543 ntBASIC4.31□□□□□ -1.72
HERC6Q8IVU3 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HERC6Q8IVU3 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.3□□□□□ -1.72
HERC6Q8IVU3 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.3□□□□□ -1.72
HERC6Q8IVU3 MTND5P1-201ENST00000445440 1375 ntBASIC4.3□□□□□ -1.72
HERC6Q8IVU3 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
HERC6Q8IVU3 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
HERC6Q8IVU3 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HERC6Q8IVU3 AL161781.1-201ENST00000354277 403 ntBASIC4.3□□□□□ -1.72
HERC6Q8IVU3 SNORD35B-201ENST00000363660 87 ntBASIC4.3□□□□□ -1.72
HERC6Q8IVU3 SNORD51-201ENST00000384320 80 ntBASIC4.3□□□□□ -1.72
HERC6Q8IVU3 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.3□□□□□ -1.72
HERC6Q8IVU3 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.3□□□□□ -1.72
HERC6Q8IVU3 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC4.3□□□□□ -1.72
HERC6Q8IVU3 PRELID3BP10-201ENST00000431957 584 ntBASIC4.3□□□□□ -1.72
HERC6Q8IVU3 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.3□□□□□ -1.72
HERC6Q8IVU3 RPL23AP89-201ENST00000439324 255 ntBASIC4.3□□□□□ -1.72
HERC6Q8IVU3 AL831737.1-201ENST00000441288 271 ntBASIC4.3□□□□□ -1.72
HERC6Q8IVU3 MTND5P14-201ENST00000441481 1267 ntBASIC4.3□□□□□ -1.72
HERC6Q8IVU3 EEF1E1P1-201ENST00000446998 430 ntBASIC4.3□□□□□ -1.72
HERC6Q8IVU3 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.3□□□□□ -1.72
HERC6Q8IVU3 RPL7P52-201ENST00000449200 742 ntBASIC4.3□□□□□ -1.72
HERC6Q8IVU3 NDUFS5P3-201ENST00000450668 321 ntBASIC4.3□□□□□ -1.72
HERC6Q8IVU3 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HERC6Q8IVU3 snoU13.8-201ENST00000458890 104 ntBASIC4.3□□□□□ -1.72
HERC6Q8IVU3 AC017015.1-201ENST00000477387 286 ntBASIC4.3□□□□□ -1.72
HERC6Q8IVU3 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.3□□□□□ -1.72
HERC6Q8IVU3 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
HERC6Q8IVU3 AC111000.2-201ENST00000507775 550 ntBASIC4.3□□□□□ -1.72
HERC6Q8IVU3 HMGN1P11-201ENST00000508668 303 ntBASIC4.3□□□□□ -1.72
HERC6Q8IVU3 AC093809.1-201ENST00000509155 340 ntBASIC4.3□□□□□ -1.72
HERC6Q8IVU3 AC010486.3-201ENST00000511602 785 ntBASIC4.3□□□□□ -1.72
HERC6Q8IVU3 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.3□□□□□ -1.72
HERC6Q8IVU3 RNU6-27P-201ENST00000516146 107 ntBASIC4.3□□□□□ -1.72
HERC6Q8IVU3 COX6CP8-201ENST00000522620 226 ntBASIC4.3□□□□□ -1.72
HERC6Q8IVU3 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC4.3□□□□□ -1.72
HERC6Q8IVU3 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.3□□□□□ -1.72
HERC6Q8IVU3 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.3□□□□□ -1.72
HERC6Q8IVU3 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.3□□□□□ -1.72
HERC6Q8IVU3 YPEL5P3-201ENST00000547227 352 ntBASIC4.3□□□□□ -1.72
HERC6Q8IVU3 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC4.3□□□□□ -1.72
HERC6Q8IVU3 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.3□□□□□ -1.72
HERC6Q8IVU3 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.3□□□□□ -1.72
HERC6Q8IVU3 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.3□□□□□ -1.72
HERC6Q8IVU3 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC4.3□□□□□ -1.72
HERC6Q8IVU3 Z99497.2-201ENST00000603634 310 ntBASIC4.3□□□□□ -1.72
HERC6Q8IVU3 CLPTM1LP1-201ENST00000604519 484 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms