Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.41□□□□□ -1.7
VRK3Q8IV63 AC139769.1-204ENST00000472297 1931 ntBASIC4.41□□□□□ -1.7
VRK3Q8IV63 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
VRK3Q8IV63 Y_RNA.58-201ENST00000362807 102 ntBASIC4.41□□□□□ -1.7
VRK3Q8IV63 Y_RNA.154-201ENST00000363624 102 ntBASIC4.41□□□□□ -1.7
VRK3Q8IV63 RNY3P1-201ENST00000365085 102 ntBASIC4.41□□□□□ -1.7
VRK3Q8IV63 RNY3-201ENST00000365484 102 ntBASIC4.41□□□□□ -1.7
VRK3Q8IV63 RNU1-63P-201ENST00000383902 164 ntBASIC4.41□□□□□ -1.7
VRK3Q8IV63 RNU6-317P-201ENST00000384031 107 ntBASIC4.41□□□□□ -1.7
VRK3Q8IV63 Y_RNA.490-201ENST00000384413 102 ntBASIC4.41□□□□□ -1.7
VRK3Q8IV63 MIR192-201ENST00000384915 110 ntBASIC4.41□□□□□ -1.7
VRK3Q8IV63 MIR137-201ENST00000385223 102 ntBASIC4.41□□□□□ -1.7
VRK3Q8IV63 RNU2-28P-201ENST00000410457 189 ntBASIC4.41□□□□□ -1.7
VRK3Q8IV63 AL359704.1-201ENST00000411586 781 ntBASIC4.41□□□□□ -1.7
VRK3Q8IV63 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC4.41□□□□□ -1.7
VRK3Q8IV63 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.41□□□□□ -1.7
VRK3Q8IV63 AC119751.6-201ENST00000416712 186 ntBASIC4.41□□□□□ -1.7
VRK3Q8IV63 MTCO3P46-201ENST00000425787 232 ntBASIC4.41□□□□□ -1.7
VRK3Q8IV63 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.41□□□□□ -1.7
VRK3Q8IV63 RPL23AP1-201ENST00000428990 471 ntBASIC4.41□□□□□ -1.7
VRK3Q8IV63 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC4.41□□□□□ -1.7
VRK3Q8IV63 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.41□□□□□ -1.7
VRK3Q8IV63 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
VRK3Q8IV63 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
VRK3Q8IV63 AC002553.2-201ENST00000453217 340 ntBASIC4.41□□□□□ -1.7
VRK3Q8IV63 AC233279.1-201ENST00000455300 423 ntBASIC4.41□□□□□ -1.7
VRK3Q8IV63 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.41□□□□□ -1.7
VRK3Q8IV63 RPS29P22-201ENST00000472363 168 ntBASIC4.41□□□□□ -1.7
VRK3Q8IV63 NIP7P2-201ENST00000485801 544 ntBASIC4.41□□□□□ -1.7
VRK3Q8IV63 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.41□□□□□ -1.7
VRK3Q8IV63 AC002456.2-201ENST00000509356 380 ntBASIC4.41□□□□□ -1.7
VRK3Q8IV63 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
VRK3Q8IV63 RNA5SP360-201ENST00000516555 118 ntBASIC4.41□□□□□ -1.7
VRK3Q8IV63 IGKV2-36-201ENST00000519999 223 ntBASIC4.41□□□□□ -1.7
VRK3Q8IV63 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.41□□□□□ -1.7
VRK3Q8IV63 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC4.41□□□□□ -1.7
VRK3Q8IV63 PHBP17-201ENST00000528576 541 ntBASIC4.41□□□□□ -1.7
VRK3Q8IV63 OR5B19P-201ENST00000531766 928 ntBASIC4.41□□□□□ -1.7
VRK3Q8IV63 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.41□□□□□ -1.7
VRK3Q8IV63 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.41□□□□□ -1.7
VRK3Q8IV63 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.41□□□□□ -1.7
VRK3Q8IV63 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.41□□□□□ -1.7
VRK3Q8IV63 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.41□□□□□ -1.7
VRK3Q8IV63 AC122134.1-201ENST00000565664 1104 ntBASIC4.41□□□□□ -1.7
VRK3Q8IV63 AC084783.1-201ENST00000565846 910 ntBASIC4.41□□□□□ -1.7
VRK3Q8IV63 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC4.41□□□□□ -1.7
VRK3Q8IV63 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.41□□□□□ -1.7
VRK3Q8IV63 BPIFA4P-203ENST00000603168 689 ntBASIC4.41□□□□□ -1.7
VRK3Q8IV63 AC008782.1-201ENST00000603386 430 ntBASIC4.41□□□□□ -1.7
VRK3Q8IV63 LLPHP1-201ENST00000603571 367 ntBASIC4.41□□□□□ -1.7
VRK3Q8IV63 AC008966.2-201ENST00000606157 453 ntBASIC4.41□□□□□ -1.7
VRK3Q8IV63 AL008729.2-201ENST00000606393 473 ntBASIC4.41□□□□□ -1.7
VRK3Q8IV63 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4.41□□□□□ -1.7
VRK3Q8IV63 AP000346.3-201ENST00000622821 210 ntBASIC4.41□□□□□ -1.7
VRK3Q8IV63 CDRT1-208ENST00000630868 794 ntBASIC4.41□□□□□ -1.7
VRK3Q8IV63 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.41□□□□□ -1.7
VRK3Q8IV63 NXPH1-205ENST00000602349 1953 ntBASIC4.41□□□□□ -1.7
VRK3Q8IV63 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.41□□□□□ -1.7
VRK3Q8IV63 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
VRK3Q8IV63 CASC19-284ENST00000642142 1868 ntBASIC4.41□□□□□ -1.7
VRK3Q8IV63 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
VRK3Q8IV63 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
VRK3Q8IV63 AP001273.1-201ENST00000624493 3152 ntBASIC4.41□□□□□ -1.7
VRK3Q8IV63 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.4□□□□□ -1.7
VRK3Q8IV63 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
VRK3Q8IV63 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.4□□□□□ -1.7
VRK3Q8IV63 AC125257.1-201ENST00000560400 2930 ntBASIC4.4□□□□□ -1.7
VRK3Q8IV63 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.4□□□□□ -1.7
VRK3Q8IV63 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
VRK3Q8IV63 RAD17P1-201ENST00000418130 2042 ntBASIC4.4□□□□□ -1.7
VRK3Q8IV63 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.4□□□□□ -1.7
VRK3Q8IV63 AL592148.3-201ENST00000608771 2646 ntBASIC4.4□□□□□ -1.7
VRK3Q8IV63 Y_RNA.138-201ENST00000363462 102 ntBASIC4.4□□□□□ -1.71
VRK3Q8IV63 AC104297.1-201ENST00000393779 870 ntBASIC4.4□□□□□ -1.71
VRK3Q8IV63 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.4□□□□□ -1.71
VRK3Q8IV63 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
VRK3Q8IV63 SDHCP2-201ENST00000398565 501 ntBASIC4.4□□□□□ -1.71
VRK3Q8IV63 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.4□□□□□ -1.71
VRK3Q8IV63 RN7SKP32-201ENST00000410167 303 ntBASIC4.4□□□□□ -1.71
VRK3Q8IV63 RNU2-8P-201ENST00000410727 190 ntBASIC4.4□□□□□ -1.71
VRK3Q8IV63 RNU6-373P-201ENST00000411247 98 ntBASIC4.4□□□□□ -1.71
VRK3Q8IV63 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.4□□□□□ -1.71
VRK3Q8IV63 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
VRK3Q8IV63 PPIAP13-201ENST00000434706 478 ntBASIC4.4□□□□□ -1.71
VRK3Q8IV63 RPL22P17-201ENST00000438729 315 ntBASIC4.4□□□□□ -1.71
VRK3Q8IV63 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.4□□□□□ -1.71
VRK3Q8IV63 CBWD4P-201ENST00000445695 655 ntBASIC4.4□□□□□ -1.71
VRK3Q8IV63 AC073587.1-201ENST00000447093 876 ntBASIC4.4□□□□□ -1.71
VRK3Q8IV63 ARPC3P5-201ENST00000448802 534 ntBASIC4.4□□□□□ -1.71
VRK3Q8IV63 AC012671.1-201ENST00000451912 203 ntBASIC4.4□□□□□ -1.71
VRK3Q8IV63 RPL21P126-201ENST00000470049 478 ntBASIC4.4□□□□□ -1.71
VRK3Q8IV63 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.4□□□□□ -1.71
VRK3Q8IV63 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
VRK3Q8IV63 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC4.4□□□□□ -1.71
VRK3Q8IV63 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
VRK3Q8IV63 RNA5SP464-201ENST00000516251 108 ntBASIC4.4□□□□□ -1.71
VRK3Q8IV63 RNU6-201P-201ENST00000517100 61 ntBASIC4.4□□□□□ -1.71
VRK3Q8IV63 HSPE1P3-201ENST00000559254 309 ntBASIC4.4□□□□□ -1.71
VRK3Q8IV63 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.4□□□□□ -1.71
VRK3Q8IV63 AL355375.2-201ENST00000574825 175 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms