Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.12□□□□□ -1.43
RNF135Q8IUD6 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
RNF135Q8IUD6 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RNF135Q8IUD6 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
RNF135Q8IUD6 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RNF135Q8IUD6 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RNF135Q8IUD6 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RNF135Q8IUD6 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.11□□□□□ -1.43
RNF135Q8IUD6 RNU6-249P-201ENST00000363016 102 ntBASIC6.11□□□□□ -1.43
RNF135Q8IUD6 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RNF135Q8IUD6 RNU6-128P-201ENST00000383976 107 ntBASIC6.11□□□□□ -1.43
RNF135Q8IUD6 RNU11-4P-201ENST00000391149 133 ntBASIC6.11□□□□□ -1.43
RNF135Q8IUD6 ENSAP1-201ENST00000392855 326 ntBASIC6.11□□□□□ -1.43
RNF135Q8IUD6 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RNF135Q8IUD6 RPL21P24-201ENST00000413752 448 ntBASIC6.11□□□□□ -1.43
RNF135Q8IUD6 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC6.11□□□□□ -1.43
RNF135Q8IUD6 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC6.11□□□□□ -1.43
RNF135Q8IUD6 RPS12P5-201ENST00000423449 371 ntBASIC6.11□□□□□ -1.43
RNF135Q8IUD6 AL360081.1-201ENST00000428299 555 ntBASIC6.11□□□□□ -1.43
RNF135Q8IUD6 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.11□□□□□ -1.43
RNF135Q8IUD6 ARL5AP4-201ENST00000430731 512 ntBASIC6.11□□□□□ -1.43
RNF135Q8IUD6 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC6.11□□□□□ -1.43
RNF135Q8IUD6 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.11□□□□□ -1.43
RNF135Q8IUD6 CEACAMP7-201ENST00000444105 496 ntBASIC6.11□□□□□ -1.43
RNF135Q8IUD6 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.11□□□□□ -1.43
RNF135Q8IUD6 AC010655.1-201ENST00000449336 292 ntBASIC6.11□□□□□ -1.43
RNF135Q8IUD6 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC6.11□□□□□ -1.43
RNF135Q8IUD6 RPS20P21-201ENST00000466859 343 ntBASIC6.11□□□□□ -1.43
RNF135Q8IUD6 RN7SL583P-201ENST00000475692 287 ntBASIC6.11□□□□□ -1.43
RNF135Q8IUD6 RN7SL97P-201ENST00000486780 299 ntBASIC6.11□□□□□ -1.43
RNF135Q8IUD6 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.11□□□□□ -1.43
RNF135Q8IUD6 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.11□□□□□ -1.43
RNF135Q8IUD6 IGLV3-30-201ENST00000524362 298 ntBASIC6.11□□□□□ -1.43
RNF135Q8IUD6 DYNLL1P4-201ENST00000549314 266 ntBASIC6.11□□□□□ -1.43
RNF135Q8IUD6 AL137100.2-201ENST00000555786 315 ntBASIC6.11□□□□□ -1.43
RNF135Q8IUD6 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC6.11□□□□□ -1.43
RNF135Q8IUD6 AC113195.1-201ENST00000579952 141 ntBASIC6.11□□□□□ -1.43
RNF135Q8IUD6 MIR4436B2-201ENST00000581415 91 ntBASIC6.11□□□□□ -1.43
RNF135Q8IUD6 MIR4436B1-201ENST00000583272 91 ntBASIC6.11□□□□□ -1.43
RNF135Q8IUD6 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6.11□□□□□ -1.43
RNF135Q8IUD6 AL138889.2-201ENST00000603883 242 ntBASIC6.11□□□□□ -1.43
RNF135Q8IUD6 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.11□□□□□ -1.43
RNF135Q8IUD6 WWOX-217ENST00000620008 450 ntTSL 2 BASIC6.11□□□□□ -1.43
RNF135Q8IUD6 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC6.11□□□□□ -1.43
RNF135Q8IUD6 AL732372.2-225ENST00000642124 456 ntBASIC6.11□□□□□ -1.43
RNF135Q8IUD6 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RNF135Q8IUD6 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.11□□□□□ -1.43
RNF135Q8IUD6 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
RNF135Q8IUD6 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.11□□□□□ -1.43
RNF135Q8IUD6 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RNF135Q8IUD6 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
RNF135Q8IUD6 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
RNF135Q8IUD6 AL359955.1-201ENST00000455242 3275 ntBASIC6.1□□□□□ -1.43
RNF135Q8IUD6 IQCB2P-201ENST00000401788 1633 ntBASIC6.1□□□□□ -1.43
RNF135Q8IUD6 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.1□□□□□ -1.43
RNF135Q8IUD6 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.1□□□□□ -1.43
RNF135Q8IUD6 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
RNF135Q8IUD6 RNU6-946P-201ENST00000383878 107 ntBASIC6.1□□□□□ -1.43
RNF135Q8IUD6 Y_RNA.399-201ENST00000383955 105 ntBASIC6.1□□□□□ -1.43
RNF135Q8IUD6 Y_RNA.447-201ENST00000384184 113 ntBASIC6.1□□□□□ -1.43
RNF135Q8IUD6 MIR765-201ENST00000390226 114 ntBASIC6.1□□□□□ -1.43
RNF135Q8IUD6 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
RNF135Q8IUD6 SNORD70.1-201ENST00000391007 85 ntBASIC6.1□□□□□ -1.43
RNF135Q8IUD6 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC6.1□□□□□ -1.43
RNF135Q8IUD6 RNU6-1050P-201ENST00000410388 107 ntBASIC6.1□□□□□ -1.43
RNF135Q8IUD6 RPLP0P7-201ENST00000416050 667 ntBASIC6.1□□□□□ -1.43
RNF135Q8IUD6 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.1□□□□□ -1.43
RNF135Q8IUD6 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.1□□□□□ -1.43
RNF135Q8IUD6 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.1□□□□□ -1.43
RNF135Q8IUD6 RPL7L1P9-201ENST00000431298 745 ntBASIC6.1□□□□□ -1.43
RNF135Q8IUD6 PCNPP5-201ENST00000452246 481 ntBASIC6.1□□□□□ -1.43
RNF135Q8IUD6 GSTA11P-201ENST00000452866 669 ntBASIC6.1□□□□□ -1.43
RNF135Q8IUD6 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.1□□□□□ -1.43
RNF135Q8IUD6 CEACAMP10-202ENST00000495431 496 ntBASIC6.1□□□□□ -1.43
RNF135Q8IUD6 VN1R104P-201ENST00000505115 1009 ntBASIC6.1□□□□□ -1.43
RNF135Q8IUD6 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.1□□□□□ -1.43
RNF135Q8IUD6 AC087854.1-201ENST00000519706 414 ntBASIC6.1□□□□□ -1.43
RNF135Q8IUD6 AP001922.4-201ENST00000526967 290 ntBASIC6.1□□□□□ -1.43
RNF135Q8IUD6 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RNF135Q8IUD6 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
RNF135Q8IUD6 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC6.1□□□□□ -1.43
RNF135Q8IUD6 AC096996.1-201ENST00000563813 325 ntBASIC6.1□□□□□ -1.43
RNF135Q8IUD6 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC6.1□□□□□ -1.43
RNF135Q8IUD6 AC018889.1-201ENST00000605372 397 ntBASIC6.1□□□□□ -1.43
RNF135Q8IUD6 DLEU2_5.1-201ENST00000615567 84 ntBASIC6.1□□□□□ -1.43
RNF135Q8IUD6 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
RNF135Q8IUD6 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC6.1□□□□□ -1.43
RNF135Q8IUD6 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC6.1□□□□□ -1.43
RNF135Q8IUD6 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
RNF135Q8IUD6 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC6.1□□□□□ -1.43
RNF135Q8IUD6 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RNF135Q8IUD6 SRRM1P3-201ENST00000426911 2678 ntBASIC6.1□□□□□ -1.43
RNF135Q8IUD6 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
RNF135Q8IUD6 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.1□□□□□ -1.43
RNF135Q8IUD6 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC6.1□□□□□ -1.43
RNF135Q8IUD6 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RNF135Q8IUD6 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
RNF135Q8IUD6 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
RNF135Q8IUD6 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.09□□□□□ -1.43
RNF135Q8IUD6 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms