Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PRPF39Q86UA1 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.89□□□□□ -1.79
PRPF39Q86UA1 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PRPF39Q86UA1 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PRPF39Q86UA1 RPL23AP57-201ENST00000332361 466 ntBASIC3.89□□□□□ -1.79
PRPF39Q86UA1 RNU6-621P-201ENST00000364752 109 ntBASIC3.89□□□□□ -1.79
PRPF39Q86UA1 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
PRPF39Q86UA1 RPL23AP29-201ENST00000397284 453 ntBASIC3.89□□□□□ -1.79
PRPF39Q86UA1 HSPE1P8-201ENST00000406997 288 ntBASIC3.89□□□□□ -1.79
PRPF39Q86UA1 USP9YP33-201ENST00000412220 421 ntBASIC3.89□□□□□ -1.79
PRPF39Q86UA1 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.89□□□□□ -1.79
PRPF39Q86UA1 OR1AA1P-201ENST00000419597 916 ntBASIC3.89□□□□□ -1.79
PRPF39Q86UA1 AC007742.1-201ENST00000425789 329 ntBASIC3.89□□□□□ -1.79
PRPF39Q86UA1 USP9YP35-201ENST00000435696 412 ntBASIC3.89□□□□□ -1.79
PRPF39Q86UA1 ELOCP26-201ENST00000436067 329 ntBASIC3.89□□□□□ -1.79
PRPF39Q86UA1 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.89□□□□□ -1.79
PRPF39Q86UA1 SDCBPP1-201ENST00000440192 890 ntBASIC3.89□□□□□ -1.79
PRPF39Q86UA1 CR769776.1-201ENST00000441254 787 ntBASIC3.89□□□□□ -1.79
PRPF39Q86UA1 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.89□□□□□ -1.79
PRPF39Q86UA1 ARPC3P5-201ENST00000448802 534 ntBASIC3.89□□□□□ -1.79
PRPF39Q86UA1 MTCO3P16-201ENST00000454456 754 ntBASIC3.89□□□□□ -1.79
PRPF39Q86UA1 DNAJC19P1-201ENST00000455312 319 ntBASIC3.89□□□□□ -1.79
PRPF39Q86UA1 AC084198.1-201ENST00000477747 402 ntBASIC3.89□□□□□ -1.79
PRPF39Q86UA1 RPL7P18-201ENST00000478965 734 ntBASIC3.89□□□□□ -1.79
PRPF39Q86UA1 AC068305.1-201ENST00000497406 726 ntBASIC3.89□□□□□ -1.79
PRPF39Q86UA1 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.89□□□□□ -1.79
PRPF39Q86UA1 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.89□□□□□ -1.79
PRPF39Q86UA1 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC3.89□□□□□ -1.79
PRPF39Q86UA1 RNA5SP208-201ENST00000516156 78 ntBASIC3.89□□□□□ -1.79
PRPF39Q86UA1 RNA5SP468-201ENST00000516782 93 ntBASIC3.89□□□□□ -1.79
PRPF39Q86UA1 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.89□□□□□ -1.79
PRPF39Q86UA1 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.89□□□□□ -1.79
PRPF39Q86UA1 SNRPGP16-201ENST00000533275 226 ntBASIC3.89□□□□□ -1.79
PRPF39Q86UA1 CR383656.7-201ENST00000548164 174 ntBASIC3.89□□□□□ -1.79
PRPF39Q86UA1 SYF2P1-201ENST00000550658 413 ntBASIC3.89□□□□□ -1.79
PRPF39Q86UA1 SETP7-201ENST00000552169 453 ntBASIC3.89□□□□□ -1.79
PRPF39Q86UA1 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.89□□□□□ -1.79
PRPF39Q86UA1 FAM60BP-201ENST00000578364 658 ntBASIC3.89□□□□□ -1.79
PRPF39Q86UA1 BBIP1P1-201ENST00000602999 279 ntBASIC3.89□□□□□ -1.79
PRPF39Q86UA1 AL158042.1-201ENST00000605338 460 ntBASIC3.89□□□□□ -1.79
PRPF39Q86UA1 SNORA51-201ENST00000606420 132 ntBASIC3.89□□□□□ -1.79
PRPF39Q86UA1 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.89□□□□□ -1.79
PRPF39Q86UA1 AC066616.2-201ENST00000559334 1481 ntBASIC3.89□□□□□ -1.79
PRPF39Q86UA1 CR381670.1-201ENST00000624291 1693 ntBASIC3.89□□□□□ -1.79
PRPF39Q86UA1 RPS4XP5-202ENST00000449995 1334 ntBASIC3.89□□□□□ -1.79
PRPF39Q86UA1 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.89□□□□□ -1.79
PRPF39Q86UA1 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
PRPF39Q86UA1 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PRPF39Q86UA1 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
PRPF39Q86UA1 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PRPF39Q86UA1 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
PRPF39Q86UA1 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
PRPF39Q86UA1 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PRPF39Q86UA1 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.88□□□□□ -1.79
PRPF39Q86UA1 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.88□□□□□ -1.79
PRPF39Q86UA1 Z98941.1-201ENST00000407764 100 ntBASIC3.88□□□□□ -1.79
PRPF39Q86UA1 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PRPF39Q86UA1 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.88□□□□□ -1.79
PRPF39Q86UA1 ELOCP9-201ENST00000418624 239 ntBASIC3.88□□□□□ -1.79
PRPF39Q86UA1 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.88□□□□□ -1.79
PRPF39Q86UA1 DUTP6-201ENST00000425573 462 ntBASIC3.88□□□□□ -1.79
PRPF39Q86UA1 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC3.88□□□□□ -1.79
PRPF39Q86UA1 SNORA71B-202ENST00000439232 272 ntBASIC3.88□□□□□ -1.79
PRPF39Q86UA1 FGF7P5-201ENST00000441829 291 ntBASIC3.88□□□□□ -1.79
PRPF39Q86UA1 AL121871.1-201ENST00000443413 436 ntBASIC3.88□□□□□ -1.79
PRPF39Q86UA1 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC3.88□□□□□ -1.79
PRPF39Q86UA1 EXTL2P1-201ENST00000446218 416 ntBASIC3.88□□□□□ -1.79
PRPF39Q86UA1 RPL23AP31-201ENST00000456160 467 ntBASIC3.88□□□□□ -1.79
PRPF39Q86UA1 HMGN2P16-201ENST00000456802 261 ntBASIC3.88□□□□□ -1.79
PRPF39Q86UA1 RNU7-136P-201ENST00000458819 69 ntBASIC3.88□□□□□ -1.79
PRPF39Q86UA1 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.88□□□□□ -1.79
PRPF39Q86UA1 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.88□□□□□ -1.79
PRPF39Q86UA1 AC091951.3-201ENST00000504093 246 ntBASIC3.88□□□□□ -1.79
PRPF39Q86UA1 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.88□□□□□ -1.79
PRPF39Q86UA1 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC3.88□□□□□ -1.79
PRPF39Q86UA1 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.88□□□□□ -1.79
PRPF39Q86UA1 HMGN1P11-201ENST00000508668 303 ntBASIC3.88□□□□□ -1.79
PRPF39Q86UA1 RAC1P2-201ENST00000511164 579 ntBASIC3.88□□□□□ -1.79
PRPF39Q86UA1 AC006499.2-201ENST00000513470 337 ntBASIC3.88□□□□□ -1.79
PRPF39Q86UA1 RNA5SP164-201ENST00000516533 110 ntBASIC3.88□□□□□ -1.79
PRPF39Q86UA1 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC3.88□□□□□ -1.79
PRPF39Q86UA1 DEFB131D-201ENST00000526803 184 ntBASIC3.88□□□□□ -1.79
PRPF39Q86UA1 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.88□□□□□ -1.79
PRPF39Q86UA1 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.88□□□□□ -1.79
PRPF39Q86UA1 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.88□□□□□ -1.79
PRPF39Q86UA1 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC3.88□□□□□ -1.79
PRPF39Q86UA1 AGGF1P5-201ENST00000567900 919 ntBASIC3.88□□□□□ -1.79
PRPF39Q86UA1 AC090615.1-201ENST00000577519 154 ntBASIC3.88□□□□□ -1.79
PRPF39Q86UA1 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.88□□□□□ -1.79
PRPF39Q86UA1 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.88□□□□□ -1.79
PRPF39Q86UA1 AC024220.1-201ENST00000603675 484 ntBASIC3.88□□□□□ -1.79
PRPF39Q86UA1 AC011468.4-201ENST00000603942 409 ntBASIC3.88□□□□□ -1.79
PRPF39Q86UA1 AC110741.2-201ENST00000605278 268 ntBASIC3.88□□□□□ -1.79
PRPF39Q86UA1 AC091046.2-201ENST00000620775 665 ntBASIC3.88□□□□□ -1.79
PRPF39Q86UA1 AC095031.1-201ENST00000623685 672 ntBASIC3.88□□□□□ -1.79
PRPF39Q86UA1 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PRPF39Q86UA1 OTUD4P1-201ENST00000237841 3067 ntBASIC3.88□□□□□ -1.79
PRPF39Q86UA1 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PRPF39Q86UA1 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PRPF39Q86UA1 AF117829.1-206ENST00000621883 3802 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms