Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
VPS13CQ709C8 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
VPS13CQ709C8 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
VPS13CQ709C8 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
VPS13CQ709C8 RNY1P14-201ENST00000384426 108 ntBASIC1.76□□□□□ -2.13
VPS13CQ709C8 MTCO2P17-201ENST00000424336 677 ntBASIC1.76□□□□□ -2.13
VPS13CQ709C8 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC1.76□□□□□ -2.13
VPS13CQ709C8 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.76□□□□□ -2.13
VPS13CQ709C8 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC1.76□□□□□ -2.13
VPS13CQ709C8 AC245517.5-201ENST00000611529 162 ntBASIC1.76□□□□□ -2.13
VPS13CQ709C8 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC1.76□□□□□ -2.13
VPS13CQ709C8 AC093311.1-201ENST00000506586 2021 ntBASIC1.76□□□□□ -2.13
VPS13CQ709C8 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
VPS13CQ709C8 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.76□□□□□ -2.13
VPS13CQ709C8 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
VPS13CQ709C8 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC1.76□□□□□ -2.13
VPS13CQ709C8 RNA5SP129-201ENST00000410276 118 ntBASIC1.76□□□□□ -2.13
VPS13CQ709C8 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.76□□□□□ -2.13
VPS13CQ709C8 RN7SL297P-201ENST00000483161 293 ntBASIC1.76□□□□□ -2.13
VPS13CQ709C8 LTV1P1-201ENST00000510683 1237 ntBASIC1.76□□□□□ -2.13
VPS13CQ709C8 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC1.76□□□□□ -2.13
VPS13CQ709C8 OR4A45P-201ENST00000529954 901 ntBASIC1.76□□□□□ -2.13
VPS13CQ709C8 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC1.76□□□□□ -2.13
VPS13CQ709C8 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
VPS13CQ709C8 AP004372.1-201ENST00000604842 844 ntBASIC1.76□□□□□ -2.13
VPS13CQ709C8 AC092628.2-201ENST00000622492 339 ntBASIC1.76□□□□□ -2.13
VPS13CQ709C8 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.76□□□□□ -2.13
VPS13CQ709C8 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
VPS13CQ709C8 AC004520.1-201ENST00000608362 1413 ntBASIC1.76□□□□□ -2.13
VPS13CQ709C8 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
VPS13CQ709C8 RNU1-87P-201ENST00000363727 170 ntBASIC1.76□□□□□ -2.13
VPS13CQ709C8 RNA5SP210-201ENST00000391034 120 ntBASIC1.76□□□□□ -2.13
VPS13CQ709C8 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
VPS13CQ709C8 IGLVIV-53-201ENST00000520107 367 ntBASIC1.76□□□□□ -2.13
VPS13CQ709C8 AC078899.5-201ENST00000612475 178 ntBASIC1.76□□□□□ -2.13
VPS13CQ709C8 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.76□□□□□ -2.13
VPS13CQ709C8 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC1.76□□□□□ -2.13
VPS13CQ709C8 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC1.75□□□□□ -2.13
VPS13CQ709C8 AL138820.1-201ENST00000617901 5305 ntBASIC1.75□□□□□ -2.13
VPS13CQ709C8 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
VPS13CQ709C8 Y_RNA.295-201ENST00000364918 102 ntBASIC1.75□□□□□ -2.13
VPS13CQ709C8 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
VPS13CQ709C8 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC1.75□□□□□ -2.13
VPS13CQ709C8 CEACAMP4-201ENST00000457676 421 ntBASIC1.75□□□□□ -2.13
VPS13CQ709C8 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.75□□□□□ -2.13
VPS13CQ709C8 MIR4303-201ENST00000581299 66 ntBASIC1.75□□□□□ -2.13
VPS13CQ709C8 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC1.75□□□□□ -2.13
VPS13CQ709C8 AL645944.1-201ENST00000603857 493 ntBASIC1.75□□□□□ -2.13
VPS13CQ709C8 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
VPS13CQ709C8 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
VPS13CQ709C8 Y_RNA.178-201ENST00000363832 102 ntBASIC1.75□□□□□ -2.13
VPS13CQ709C8 Y_RNA.224-201ENST00000364308 111 ntBASIC1.75□□□□□ -2.13
VPS13CQ709C8 RNU6-356P-201ENST00000384140 107 ntBASIC1.75□□□□□ -2.13
VPS13CQ709C8 RNU2-6P-201ENST00000411404 190 ntBASIC1.75□□□□□ -2.13
VPS13CQ709C8 snoZ278.1-201ENST00000517059 112 ntBASIC1.75□□□□□ -2.13
VPS13CQ709C8 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
VPS13CQ709C8 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
VPS13CQ709C8 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC1.75□□□□□ -2.13
VPS13CQ709C8 RPS27P29-201ENST00000463110 252 ntBASIC1.75□□□□□ -2.13
VPS13CQ709C8 AL450489.1-201ENST00000612071 468 ntBASIC1.75□□□□□ -2.13
VPS13CQ709C8 AC091046.2-201ENST00000620775 665 ntBASIC1.75□□□□□ -2.13
VPS13CQ709C8 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
VPS13CQ709C8 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
VPS13CQ709C8 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.74□□□□□ -2.13
VPS13CQ709C8 AC091953.2-201ENST00000623979 160 ntBASIC1.74□□□□□ -2.13
VPS13CQ709C8 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC1.74□□□□□ -2.13
VPS13CQ709C8 OR5H15-201ENST00000383696 930 ntBASIC1.74□□□□□ -2.13
VPS13CQ709C8 AP000275.1-201ENST00000411943 390 ntBASIC1.74□□□□□ -2.13
VPS13CQ709C8 MTATP6P11-201ENST00000428071 670 ntBASIC1.74□□□□□ -2.13
VPS13CQ709C8 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC1.74□□□□□ -2.13
VPS13CQ709C8 AC105918.1-201ENST00000474399 838 ntBASIC1.74□□□□□ -2.13
VPS13CQ709C8 AC092991.1-201ENST00000477176 376 ntBASIC1.74□□□□□ -2.13
VPS13CQ709C8 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC1.74□□□□□ -2.13
VPS13CQ709C8 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC1.74□□□□□ -2.13
VPS13CQ709C8 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
VPS13CQ709C8 HMGB1P10-201ENST00000395823 563 ntBASIC1.74□□□□□ -2.13
VPS13CQ709C8 RPL23AP76-201ENST00000441860 458 ntBASIC1.74□□□□□ -2.13
VPS13CQ709C8 AC017007.3-201ENST00000479865 435 ntBASIC1.74□□□□□ -2.13
VPS13CQ709C8 RPL38P4-201ENST00000502376 214 ntBASIC1.74□□□□□ -2.13
VPS13CQ709C8 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC1.74□□□□□ -2.13
VPS13CQ709C8 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
VPS13CQ709C8 AC055876.1-202ENST00000567053 138 ntBASIC1.74□□□□□ -2.13
VPS13CQ709C8 VN1R80P-201ENST00000597126 338 ntBASIC1.74□□□□□ -2.13
VPS13CQ709C8 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.74□□□□□ -2.13
VPS13CQ709C8 AC108479.2-201ENST00000617314 601 ntBASIC1.74□□□□□ -2.13
VPS13CQ709C8 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC1.74□□□□□ -2.13
VPS13CQ709C8 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
VPS13CQ709C8 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.73□□□□□ -2.13
VPS13CQ709C8 POLR2J4-204ENST00000418424 324 ntBASIC1.73□□□□□ -2.13
VPS13CQ709C8 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC1.73□□□□□ -2.13
VPS13CQ709C8 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.73□□□□□ -2.13
VPS13CQ709C8 AC003989.2-201ENST00000440224 169 ntBASIC1.73□□□□□ -2.13
VPS13CQ709C8 AL445669.2-201ENST00000454425 421 ntBASIC1.73□□□□□ -2.13
VPS13CQ709C8 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC1.73□□□□□ -2.13
VPS13CQ709C8 AC110741.2-201ENST00000605278 268 ntBASIC1.73□□□□□ -2.13
VPS13CQ709C8 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC1.73□□□□□ -2.13
VPS13CQ709C8 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
VPS13CQ709C8 AC009501.3-201ENST00000605001 1352 ntBASIC1.73□□□□□ -2.13
VPS13CQ709C8 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC1.73□□□□□ -2.13
VPS13CQ709C8 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms