Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 AC067959.1-201ENST00000604334 379 ntBASIC3.53□□□□□ -1.84
C9orf139Q6ZV77 AL109618.2-201ENST00000605527 211 ntBASIC3.53□□□□□ -1.84
C9orf139Q6ZV77 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC3.53□□□□□ -1.84
C9orf139Q6ZV77 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.53□□□□□ -1.84
C9orf139Q6ZV77 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.53□□□□□ -1.84
C9orf139Q6ZV77 AL157786.1-207ENST00000627771 695 ntBASIC3.53□□□□□ -1.84
C9orf139Q6ZV77 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
C9orf139Q6ZV77 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
C9orf139Q6ZV77 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC3.53□□□□□ -1.84
C9orf139Q6ZV77 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.85
C9orf139Q6ZV77 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC3.53□□□□□ -1.85
C9orf139Q6ZV77 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.53□□□□□ -1.85
C9orf139Q6ZV77 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
C9orf139Q6ZV77 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 NXPH1-205ENST00000602349 1953 ntBASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 LARP1BP1-201ENST00000506036 1359 ntBASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 RNU1-94P-201ENST00000362627 173 ntBASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 RNA5SP307-201ENST00000362863 116 ntBASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 SNORD96B-201ENST00000386148 79 ntBASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 RNA5SP317-201ENST00000410176 116 ntBASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 RNA5SP311-201ENST00000411290 116 ntBASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 AC009237.10-201ENST00000414112 510 ntBASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 C1DP2-201ENST00000418167 426 ntBASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 MTND6P13-201ENST00000443510 523 ntBASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 AC002381.1-201ENST00000447049 280 ntBASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 GAPDHP17-201ENST00000449858 1001 ntBASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 HCG17-214ENST00000453558 732 ntTSL 5 BASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 USP9YP34-201ENST00000453983 808 ntBASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 AC027673.1-201ENST00000456245 405 ntBASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 TRBV26-201ENST00000456572 344 ntBASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 snoU13.7-201ENST00000459220 104 ntBASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 RPL7AP28-201ENST00000464513 571 ntBASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 AC007537.2-201ENST00000472093 511 ntBASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 RPL21P103-201ENST00000479921 488 ntBASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 FAM172BP-201ENST00000487497 1089 ntBASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 RPS27AP13-201ENST00000498403 237 ntBASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 AC024589.1-201ENST00000512207 263 ntBASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 RNA5SP315-201ENST00000516340 116 ntBASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 RNA5SP312-201ENST00000517068 116 ntBASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 AP003122.4-201ENST00000530980 758 ntBASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 AC006960.3-201ENST00000561845 705 ntBASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 VN1R79P-201ENST00000593540 513 ntBASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 AL591034.3-201ENST00000605511 685 ntBASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 AC103710.1-201ENST00000610003 901 ntBASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 AC105429.2-201ENST00000610567 517 ntBASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 AC090970.3-201ENST00000612566 866 ntBASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 AL021997.2-201ENST00000615674 271 ntBASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 AL139089.1-201ENST00000620372 975 ntBASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 AC005086.4-201ENST00000623065 213 ntBASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 AC091905.2-201ENST00000623143 306 ntBASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 CR381653.2-201ENST00000624041 768 ntBASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 RNA5SP196-201ENST00000625967 102 ntBASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 ELF2P3-201ENST00000445099 1506 ntBASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 AC004520.1-201ENST00000608362 1413 ntBASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 AL133243.3-201ENST00000617415 3004 ntBASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
C9orf139Q6ZV77 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.51□□□□□ -1.85
C9orf139Q6ZV77 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
C9orf139Q6ZV77 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
C9orf139Q6ZV77 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
C9orf139Q6ZV77 RNA5SP175-201ENST00000364275 119 ntBASIC3.51□□□□□ -1.85
C9orf139Q6ZV77 RNU1-63P-201ENST00000383902 164 ntBASIC3.51□□□□□ -1.85
C9orf139Q6ZV77 RNY3P14-201ENST00000384309 102 ntBASIC3.51□□□□□ -1.85
C9orf139Q6ZV77 RNU6-1226P-201ENST00000384317 107 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms