Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 AC090572.1-201ENST00000519251 160 ntBASIC5.42□□□□□ -1.54
RUFY4Q6ZNE9 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC5.42□□□□□ -1.54
RUFY4Q6ZNE9 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.42□□□□□ -1.54
RUFY4Q6ZNE9 PHBP17-201ENST00000528576 541 ntBASIC5.42□□□□□ -1.54
RUFY4Q6ZNE9 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RUFY4Q6ZNE9 AC024224.1-201ENST00000538284 609 ntBASIC5.42□□□□□ -1.54
RUFY4Q6ZNE9 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.42□□□□□ -1.54
RUFY4Q6ZNE9 MIR4284-201ENST00000578924 81 ntBASIC5.42□□□□□ -1.54
RUFY4Q6ZNE9 MIR4716-201ENST00000579628 84 ntBASIC5.42□□□□□ -1.54
RUFY4Q6ZNE9 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC5.42□□□□□ -1.54
RUFY4Q6ZNE9 AC104687.2-201ENST00000604442 342 ntBASIC5.42□□□□□ -1.54
RUFY4Q6ZNE9 AC010424.2-201ENST00000607594 443 ntBASIC5.42□□□□□ -1.54
RUFY4Q6ZNE9 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.42□□□□□ -1.54
RUFY4Q6ZNE9 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC5.42□□□□□ -1.54
RUFY4Q6ZNE9 DISC2.1-201ENST00000612827 205 ntBASIC5.42□□□□□ -1.54
RUFY4Q6ZNE9 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC5.42□□□□□ -1.54
RUFY4Q6ZNE9 AC019206.1-201ENST00000621938 425 ntBASIC5.42□□□□□ -1.54
RUFY4Q6ZNE9 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RUFY4Q6ZNE9 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.42□□□□□ -1.54
RUFY4Q6ZNE9 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.42□□□□□ -1.54
RUFY4Q6ZNE9 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.42□□□□□ -1.54
RUFY4Q6ZNE9 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RUFY4Q6ZNE9 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RUFY4Q6ZNE9 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RUFY4Q6ZNE9 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC5.41□□□□□ -1.54
RUFY4Q6ZNE9 RNU6-451P-201ENST00000362921 107 ntBASIC5.41□□□□□ -1.54
RUFY4Q6ZNE9 Y_RNA.157-201ENST00000363638 102 ntBASIC5.41□□□□□ -1.54
RUFY4Q6ZNE9 RNU6-1011P-201ENST00000384668 107 ntBASIC5.41□□□□□ -1.54
RUFY4Q6ZNE9 U3.30-201ENST00000391308 210 ntBASIC5.41□□□□□ -1.54
RUFY4Q6ZNE9 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.41□□□□□ -1.54
RUFY4Q6ZNE9 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.41□□□□□ -1.54
RUFY4Q6ZNE9 RGS17P1-201ENST00000423358 553 ntBASIC5.41□□□□□ -1.54
RUFY4Q6ZNE9 AC016712.1-201ENST00000431088 378 ntBASIC5.41□□□□□ -1.54
RUFY4Q6ZNE9 AL359265.2-201ENST00000434367 631 ntBASIC5.41□□□□□ -1.54
RUFY4Q6ZNE9 AC010326.1-201ENST00000462726 602 ntBASIC5.41□□□□□ -1.54
RUFY4Q6ZNE9 ACTR3BP4-201ENST00000503033 1244 ntBASIC5.41□□□□□ -1.54
RUFY4Q6ZNE9 MTCO2P30-201ENST00000503662 364 ntBASIC5.41□□□□□ -1.54
RUFY4Q6ZNE9 AK3P4-201ENST00000504283 583 ntBASIC5.41□□□□□ -1.54
RUFY4Q6ZNE9 AC139783.2-201ENST00000504847 1145 ntBASIC5.41□□□□□ -1.54
RUFY4Q6ZNE9 SNORA40.12-201ENST00000516329 111 ntBASIC5.41□□□□□ -1.54
RUFY4Q6ZNE9 TOMM20P2-201ENST00000540082 421 ntBASIC5.41□□□□□ -1.54
RUFY4Q6ZNE9 HIF1AP1-201ENST00000553642 175 ntBASIC5.41□□□□□ -1.54
RUFY4Q6ZNE9 OR4T1P-201ENST00000554933 911 ntBASIC5.41□□□□□ -1.54
RUFY4Q6ZNE9 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.41□□□□□ -1.54
RUFY4Q6ZNE9 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.41□□□□□ -1.54
RUFY4Q6ZNE9 AC015917.1-201ENST00000579654 510 ntBASIC5.41□□□□□ -1.54
RUFY4Q6ZNE9 KC877982.1-201ENST00000602313 470 ntBASIC5.41□□□□□ -1.54
RUFY4Q6ZNE9 AC025449.1-201ENST00000603896 529 ntBASIC5.41□□□□□ -1.54
RUFY4Q6ZNE9 RNU4-89P-201ENST00000607443 133 ntBASIC5.41□□□□□ -1.54
RUFY4Q6ZNE9 AC007038.2-201ENST00000608095 740 ntBASIC5.41□□□□□ -1.54
RUFY4Q6ZNE9 AC007497.1-201ENST00000610421 561 ntBASIC5.41□□□□□ -1.54
RUFY4Q6ZNE9 AL121757.2-201ENST00000611223 313 ntBASIC5.41□□□□□ -1.54
RUFY4Q6ZNE9 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC5.41□□□□□ -1.54
RUFY4Q6ZNE9 uc_338.12-201ENST00000616344 181 ntBASIC5.41□□□□□ -1.54
RUFY4Q6ZNE9 MIR6853-201ENST00000619642 74 ntBASIC5.41□□□□□ -1.54
RUFY4Q6ZNE9 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RUFY4Q6ZNE9 MTND1P37-201ENST00000636562 264 ntBASIC5.41□□□□□ -1.54
RUFY4Q6ZNE9 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
RUFY4Q6ZNE9 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.41□□□□□ -1.54
RUFY4Q6ZNE9 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
RUFY4Q6ZNE9 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RUFY4Q6ZNE9 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.4□□□□□ -1.54
RUFY4Q6ZNE9 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
RUFY4Q6ZNE9 AC063976.2-201ENST00000425667 3556 ntBASIC5.4□□□□□ -1.54
RUFY4Q6ZNE9 AC008758.3-201ENST00000507003 1829 ntBASIC5.4□□□□□ -1.54
RUFY4Q6ZNE9 OR52B1P-201ENST00000316506 909 ntBASIC5.4□□□□□ -1.54
RUFY4Q6ZNE9 AL590240.1-201ENST00000334118 313 ntBASIC5.4□□□□□ -1.54
RUFY4Q6ZNE9 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
RUFY4Q6ZNE9 RNU6-178P-201ENST00000384631 104 ntBASIC5.4□□□□□ -1.54
RUFY4Q6ZNE9 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
RUFY4Q6ZNE9 AL049697.2-201ENST00000403708 294 ntBASIC5.4□□□□□ -1.54
RUFY4Q6ZNE9 AC004987.3-201ENST00000413879 771 ntBASIC5.4□□□□□ -1.54
RUFY4Q6ZNE9 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC5.4□□□□□ -1.54
RUFY4Q6ZNE9 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC5.4□□□□□ -1.54
RUFY4Q6ZNE9 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RUFY4Q6ZNE9 AC002553.2-201ENST00000453217 340 ntBASIC5.4□□□□□ -1.54
RUFY4Q6ZNE9 AC104308.1-201ENST00000454621 333 ntBASIC5.4□□□□□ -1.54
RUFY4Q6ZNE9 RPS20P20-201ENST00000460498 340 ntBASIC5.4□□□□□ -1.54
RUFY4Q6ZNE9 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
RUFY4Q6ZNE9 RPL39P36-201ENST00000490784 156 ntBASIC5.4□□□□□ -1.54
RUFY4Q6ZNE9 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.4□□□□□ -1.54
RUFY4Q6ZNE9 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC5.4□□□□□ -1.54
RUFY4Q6ZNE9 RNU6-410P-201ENST00000517006 107 ntBASIC5.4□□□□□ -1.54
RUFY4Q6ZNE9 RNA5SP337-201ENST00000517007 109 ntBASIC5.4□□□□□ -1.54
RUFY4Q6ZNE9 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC5.4□□□□□ -1.54
RUFY4Q6ZNE9 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.4□□□□□ -1.54
RUFY4Q6ZNE9 AP003497.1-201ENST00000528472 562 ntBASIC5.4□□□□□ -1.54
RUFY4Q6ZNE9 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.4□□□□□ -1.54
RUFY4Q6ZNE9 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.4□□□□□ -1.54
RUFY4Q6ZNE9 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC5.4□□□□□ -1.54
RUFY4Q6ZNE9 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.4□□□□□ -1.54
RUFY4Q6ZNE9 AC233702.9-201ENST00000581528 203 ntBASIC5.4□□□□□ -1.54
RUFY4Q6ZNE9 AC060771.1-201ENST00000582031 164 ntBASIC5.4□□□□□ -1.54
RUFY4Q6ZNE9 UBE2L4-201ENST00000587688 464 ntBASIC5.4□□□□□ -1.54
RUFY4Q6ZNE9 AC010680.3-201ENST00000604215 520 ntBASIC5.4□□□□□ -1.54
RUFY4Q6ZNE9 AL391813.2-201ENST00000609113 322 ntBASIC5.4□□□□□ -1.54
RUFY4Q6ZNE9 AC019193.2-201ENST00000610012 634 ntBASIC5.4□□□□□ -1.54
RUFY4Q6ZNE9 AL049794.2-201ENST00000616301 365 ntBASIC5.4□□□□□ -1.54
RUFY4Q6ZNE9 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC5.4□□□□□ -1.54
RUFY4Q6ZNE9 AP001005.3-201ENST00000622049 129 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 217.2 ms