Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NIPAL3Q6P499 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.18□□□□□ -1.9
NIPAL3Q6P499 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
NIPAL3Q6P499 RPL7P26-201ENST00000333817 754 ntBASIC3.18□□□□□ -1.9
NIPAL3Q6P499 SNORD9-201ENST00000362566 104 ntBASIC3.18□□□□□ -1.9
NIPAL3Q6P499 RNU6-173P-201ENST00000364215 104 ntBASIC3.18□□□□□ -1.9
NIPAL3Q6P499 SNORA5A-201ENST00000384111 134 ntBASIC3.18□□□□□ -1.9
NIPAL3Q6P499 AC245052.5-201ENST00000416320 649 ntBASIC3.18□□□□□ -1.9
NIPAL3Q6P499 AL449283.1-202ENST00000418249 604 ntBASIC3.18□□□□□ -1.9
NIPAL3Q6P499 AL137014.1-201ENST00000420490 1226 ntBASIC3.18□□□□□ -1.9
NIPAL3Q6P499 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC3.18□□□□□ -1.9
NIPAL3Q6P499 AC019178.2-201ENST00000423595 505 ntBASIC3.18□□□□□ -1.9
NIPAL3Q6P499 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.18□□□□□ -1.9
NIPAL3Q6P499 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.18□□□□□ -1.9
NIPAL3Q6P499 HMGN2P20-201ENST00000437531 273 ntBASIC3.18□□□□□ -1.9
NIPAL3Q6P499 MUPP-201ENST00000438111 566 ntBASIC3.18□□□□□ -1.9
NIPAL3Q6P499 TXNP1-201ENST00000441872 371 ntBASIC3.18□□□□□ -1.9
NIPAL3Q6P499 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.18□□□□□ -1.9
NIPAL3Q6P499 AL357552.1-201ENST00000445254 415 ntBASIC3.18□□□□□ -1.9
NIPAL3Q6P499 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.18□□□□□ -1.9
NIPAL3Q6P499 AL589880.1-201ENST00000448271 287 ntBASIC3.18□□□□□ -1.9
NIPAL3Q6P499 AL133547.1-201ENST00000448546 220 ntBASIC3.18□□□□□ -1.9
NIPAL3Q6P499 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.18□□□□□ -1.9
NIPAL3Q6P499 Z82190.1-201ENST00000454534 490 ntBASIC3.18□□□□□ -1.9
NIPAL3Q6P499 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.18□□□□□ -1.9
NIPAL3Q6P499 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.18□□□□□ -1.9
NIPAL3Q6P499 RPL23AP14-201ENST00000468281 468 ntBASIC3.18□□□□□ -1.9
NIPAL3Q6P499 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.18□□□□□ -1.9
NIPAL3Q6P499 AC113347.3-201ENST00000509113 148 ntBASIC3.18□□□□□ -1.9
NIPAL3Q6P499 RNU6-1225P-201ENST00000516336 65 ntBASIC3.18□□□□□ -1.9
NIPAL3Q6P499 PAICSP4-201ENST00000517543 1253 ntBASIC3.18□□□□□ -1.9
NIPAL3Q6P499 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.18□□□□□ -1.9
NIPAL3Q6P499 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.18□□□□□ -1.9
NIPAL3Q6P499 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.18□□□□□ -1.9
NIPAL3Q6P499 AL391156.1-201ENST00000554965 554 ntBASIC3.18□□□□□ -1.9
NIPAL3Q6P499 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.18□□□□□ -1.9
NIPAL3Q6P499 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.18□□□□□ -1.9
NIPAL3Q6P499 MIR4474-201ENST00000579189 78 ntBASIC3.18□□□□□ -1.9
NIPAL3Q6P499 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.18□□□□□ -1.9
NIPAL3Q6P499 AL109653.1-201ENST00000603091 248 ntBASIC3.18□□□□□ -1.9
NIPAL3Q6P499 AC073348.1-201ENST00000623002 331 ntBASIC3.18□□□□□ -1.9
NIPAL3Q6P499 AL356585.4-201ENST00000623078 1229 ntBASIC3.18□□□□□ -1.9
NIPAL3Q6P499 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.18□□□□□ -1.9
NIPAL3Q6P499 AC004808.1-201ENST00000627671 721 ntBASIC3.18□□□□□ -1.9
NIPAL3Q6P499 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.18□□□□□ -1.9
NIPAL3Q6P499 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NIPAL3Q6P499 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.18□□□□□ -1.9
NIPAL3Q6P499 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NIPAL3Q6P499 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NIPAL3Q6P499 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NIPAL3Q6P499 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
NIPAL3Q6P499 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
NIPAL3Q6P499 AL450338.1-201ENST00000407987 512 ntBASIC3.17□□□□□ -1.9
NIPAL3Q6P499 RPL7P30-201ENST00000420888 709 ntBASIC3.17□□□□□ -1.9
NIPAL3Q6P499 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.17□□□□□ -1.9
NIPAL3Q6P499 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.17□□□□□ -1.9
NIPAL3Q6P499 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.17□□□□□ -1.9
NIPAL3Q6P499 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NIPAL3Q6P499 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.17□□□□□ -1.9
NIPAL3Q6P499 AC007967.1-201ENST00000455422 1159 ntBASIC3.17□□□□□ -1.9
NIPAL3Q6P499 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.17□□□□□ -1.9
NIPAL3Q6P499 SUMO2P2-201ENST00000456482 255 ntBASIC3.17□□□□□ -1.9
NIPAL3Q6P499 AC021205.2-201ENST00000480069 347 ntBASIC3.17□□□□□ -1.9
NIPAL3Q6P499 AL049830.2-201ENST00000480072 201 ntBASIC3.17□□□□□ -1.9
NIPAL3Q6P499 COX7A2P2-201ENST00000505291 250 ntBASIC3.17□□□□□ -1.9
NIPAL3Q6P499 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.17□□□□□ -1.9
NIPAL3Q6P499 SAP18P1-201ENST00000512058 390 ntBASIC3.17□□□□□ -1.9
NIPAL3Q6P499 SNORA70.18-201ENST00000516696 98 ntBASIC3.17□□□□□ -1.9
NIPAL3Q6P499 AC104986.1-201ENST00000517978 436 ntBASIC3.17□□□□□ -1.9
NIPAL3Q6P499 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.17□□□□□ -1.9
NIPAL3Q6P499 RPL12P22-201ENST00000519073 490 ntBASIC3.17□□□□□ -1.9
NIPAL3Q6P499 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.17□□□□□ -1.9
NIPAL3Q6P499 AC010198.2-201ENST00000550612 259 ntBASIC3.17□□□□□ -1.9
NIPAL3Q6P499 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.17□□□□□ -1.9
NIPAL3Q6P499 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC3.17□□□□□ -1.9
NIPAL3Q6P499 COX6CP3-201ENST00000580869 223 ntBASIC3.17□□□□□ -1.9
NIPAL3Q6P499 MIR4637-201ENST00000582405 84 ntBASIC3.17□□□□□ -1.9
NIPAL3Q6P499 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.17□□□□□ -1.9
NIPAL3Q6P499 MAGOH2P-202ENST00000584384 429 ntBASIC3.17□□□□□ -1.9
NIPAL3Q6P499 AC006116.10-201ENST00000591836 581 ntBASIC3.17□□□□□ -1.9
NIPAL3Q6P499 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.17□□□□□ -1.9
NIPAL3Q6P499 BDH2P1-201ENST00000602288 736 ntBASIC3.17□□□□□ -1.9
NIPAL3Q6P499 AF129408.1-201ENST00000608767 431 ntBASIC3.17□□□□□ -1.9
NIPAL3Q6P499 AC106028.5-201ENST00000610332 395 ntBASIC3.17□□□□□ -1.9
NIPAL3Q6P499 PART1_2.1-201ENST00000612397 250 ntBASIC3.17□□□□□ -1.9
NIPAL3Q6P499 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.17□□□□□ -1.9
NIPAL3Q6P499 AL353748.2-201ENST00000622148 471 ntBASIC3.17□□□□□ -1.9
NIPAL3Q6P499 AC039056.2-201ENST00000622261 511 ntBASIC3.17□□□□□ -1.9
NIPAL3Q6P499 AP003355.3-201ENST00000623465 114 ntBASIC3.17□□□□□ -1.9
NIPAL3Q6P499 AC110801.1-201ENST00000623590 212 ntBASIC3.17□□□□□ -1.9
NIPAL3Q6P499 AC034229.5-201ENST00000624258 185 ntBASIC3.17□□□□□ -1.9
NIPAL3Q6P499 AL034408.1-202ENST00000636088 415 ntBASIC3.17□□□□□ -1.9
NIPAL3Q6P499 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.17□□□□□ -1.9
NIPAL3Q6P499 MIR1322-201ENST00000638013 71 ntBASIC3.17□□□□□ -1.9
NIPAL3Q6P499 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.17□□□□□ -1.9
NIPAL3Q6P499 AL645937.1-201ENST00000641739 1652 ntBASIC3.17□□□□□ -1.9
NIPAL3Q6P499 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NIPAL3Q6P499 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NIPAL3Q6P499 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
NIPAL3Q6P499 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms