Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 AC141273.2-201ENST00000618989 130 ntBASIC6.37□□□□□ -1.39
PRPF38BQ5VTL8 AC008785.1-201ENST00000624475 456 ntBASIC6.37□□□□□ -1.39
PRPF38BQ5VTL8 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC6.37□□□□□ -1.39
PRPF38BQ5VTL8 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PRPF38BQ5VTL8 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.37□□□□□ -1.39
PRPF38BQ5VTL8 AC110597.1-201ENST00000562669 3176 ntBASIC6.37□□□□□ -1.39
PRPF38BQ5VTL8 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
PRPF38BQ5VTL8 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.37□□□□□ -1.39
PRPF38BQ5VTL8 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.37□□□□□ -1.39
PRPF38BQ5VTL8 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PRPF38BQ5VTL8 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.37□□□□□ -1.39
PRPF38BQ5VTL8 AL033543.1-201ENST00000623440 13454 ntBASIC6.37□□□□□ -1.39
PRPF38BQ5VTL8 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC6.37□□□□□ -1.39
PRPF38BQ5VTL8 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.37□□□□□ -1.39
PRPF38BQ5VTL8 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC6.37□□□□□ -1.39
PRPF38BQ5VTL8 AC010329.1-201ENST00000593903 8328 ntBASIC6.37□□□□□ -1.39
PRPF38BQ5VTL8 STK31-205ENST00000433467 3085 ntTSL 2 BASIC6.36□□□□□ -1.39
PRPF38BQ5VTL8 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
PRPF38BQ5VTL8 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC6.36□□□□□ -1.39
PRPF38BQ5VTL8 AL034546.1-201ENST00000623740 3693 ntBASIC6.36□□□□□ -1.39
PRPF38BQ5VTL8 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
PRPF38BQ5VTL8 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PRPF38BQ5VTL8 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.36□□□□□ -1.39
PRPF38BQ5VTL8 KCNMB3P1-202ENST00000493696 3389 ntBASIC6.36□□□□□ -1.39
PRPF38BQ5VTL8 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PRPF38BQ5VTL8 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC6.36□□□□□ -1.39
PRPF38BQ5VTL8 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PRPF38BQ5VTL8 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PRPF38BQ5VTL8 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.36□□□□□ -1.39
PRPF38BQ5VTL8 AC119674.1-204ENST00000641348 1343 ntBASIC6.36□□□□□ -1.39
PRPF38BQ5VTL8 RNU6-472P-201ENST00000384299 107 ntBASIC6.36□□□□□ -1.39
PRPF38BQ5VTL8 MIR517A-201ENST00000385001 87 ntBASIC6.36□□□□□ -1.39
PRPF38BQ5VTL8 MT-TC-201ENST00000387405 66 ntBASIC6.36□□□□□ -1.39
PRPF38BQ5VTL8 ENSAP1-201ENST00000392855 326 ntBASIC6.36□□□□□ -1.39
PRPF38BQ5VTL8 RPS23P10-201ENST00000416185 486 ntBASIC6.36□□□□□ -1.39
PRPF38BQ5VTL8 AC007562.1-201ENST00000421819 517 ntBASIC6.36□□□□□ -1.39
PRPF38BQ5VTL8 CEACAMP1-201ENST00000434624 1035 ntBASIC6.36□□□□□ -1.39
PRPF38BQ5VTL8 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC6.36□□□□□ -1.39
PRPF38BQ5VTL8 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC6.36□□□□□ -1.39
PRPF38BQ5VTL8 HSFY6P-201ENST00000445573 403 ntBASIC6.36□□□□□ -1.39
PRPF38BQ5VTL8 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC6.36□□□□□ -1.39
PRPF38BQ5VTL8 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC6.36□□□□□ -1.39
PRPF38BQ5VTL8 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC6.36□□□□□ -1.39
PRPF38BQ5VTL8 AC092436.3-201ENST00000511788 257 ntBASIC6.36□□□□□ -1.39
PRPF38BQ5VTL8 Y_RNA.680-201ENST00000516441 93 ntBASIC6.36□□□□□ -1.39
PRPF38BQ5VTL8 AC092490.3-201ENST00000545370 572 ntBASIC6.36□□□□□ -1.39
PRPF38BQ5VTL8 HMGB3P26-201ENST00000560051 582 ntBASIC6.36□□□□□ -1.39
PRPF38BQ5VTL8 SUB1P3-201ENST00000564581 315 ntBASIC6.36□□□□□ -1.39
PRPF38BQ5VTL8 MRPS21P7-201ENST00000566937 238 ntBASIC6.36□□□□□ -1.39
PRPF38BQ5VTL8 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.36□□□□□ -1.39
PRPF38BQ5VTL8 AC034105.4-201ENST00000568304 277 ntBASIC6.36□□□□□ -1.39
PRPF38BQ5VTL8 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.36□□□□□ -1.39
PRPF38BQ5VTL8 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC6.36□□□□□ -1.39
PRPF38BQ5VTL8 AL590392.1-201ENST00000604960 446 ntBASIC6.36□□□□□ -1.39
PRPF38BQ5VTL8 AL139099.4-201ENST00000614802 114 ntBASIC6.36□□□□□ -1.39
PRPF38BQ5VTL8 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PRPF38BQ5VTL8 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
PRPF38BQ5VTL8 AC233263.6-201ENST00000631132 1963 ntBASIC6.36□□□□□ -1.39
PRPF38BQ5VTL8 AL731566.1-201ENST00000620490 1937 ntBASIC6.36□□□□□ -1.39
PRPF38BQ5VTL8 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PRPF38BQ5VTL8 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
PRPF38BQ5VTL8 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PRPF38BQ5VTL8 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
PRPF38BQ5VTL8 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
PRPF38BQ5VTL8 GTF2IP4-201ENST00000453092 2054 ntBASIC6.35□□□□□ -1.39
PRPF38BQ5VTL8 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
PRPF38BQ5VTL8 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
PRPF38BQ5VTL8 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
PRPF38BQ5VTL8 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
PRPF38BQ5VTL8 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.35□□□□□ -1.39
PRPF38BQ5VTL8 AL139384.2-201ENST00000613809 3590 ntBASIC6.35□□□□□ -1.39
PRPF38BQ5VTL8 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
PRPF38BQ5VTL8 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
PRPF38BQ5VTL8 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
PRPF38BQ5VTL8 RNA5SP123-201ENST00000363244 119 ntBASIC6.35□□□□□ -1.39
PRPF38BQ5VTL8 SNORA23-201ENST00000365128 182 ntBASIC6.35□□□□□ -1.39
PRPF38BQ5VTL8 RNU6-842P-201ENST00000384269 107 ntBASIC6.35□□□□□ -1.39
PRPF38BQ5VTL8 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC6.35□□□□□ -1.39
PRPF38BQ5VTL8 REREP1Y-201ENST00000422655 198 ntBASIC6.35□□□□□ -1.39
PRPF38BQ5VTL8 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC6.35□□□□□ -1.39
PRPF38BQ5VTL8 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.35□□□□□ -1.39
PRPF38BQ5VTL8 AC004975.1-201ENST00000428733 208 ntBASIC6.35□□□□□ -1.39
PRPF38BQ5VTL8 AL645568.3-201ENST00000433683 316 ntBASIC6.35□□□□□ -1.39
PRPF38BQ5VTL8 REREP2Y-201ENST00000439103 200 ntBASIC6.35□□□□□ -1.39
PRPF38BQ5VTL8 AC011816.1-201ENST00000441346 546 ntBASIC6.35□□□□□ -1.39
PRPF38BQ5VTL8 NEFMP1-201ENST00000443423 1006 ntBASIC6.35□□□□□ -1.39
PRPF38BQ5VTL8 GAPDHP27-201ENST00000447427 1020 ntBASIC6.35□□□□□ -1.39
PRPF38BQ5VTL8 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC6.35□□□□□ -1.39
PRPF38BQ5VTL8 AL450023.1-201ENST00000450868 751 ntBASIC6.35□□□□□ -1.39
PRPF38BQ5VTL8 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC6.35□□□□□ -1.39
PRPF38BQ5VTL8 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC6.35□□□□□ -1.39
PRPF38BQ5VTL8 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC6.35□□□□□ -1.39
PRPF38BQ5VTL8 IGKV2D-36-201ENST00000518643 226 ntBASIC6.35□□□□□ -1.39
PRPF38BQ5VTL8 AC007991.1-201ENST00000522680 631 ntBASIC6.35□□□□□ -1.39
PRPF38BQ5VTL8 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC6.35□□□□□ -1.39
PRPF38BQ5VTL8 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC6.35□□□□□ -1.39
PRPF38BQ5VTL8 MEG8-215ENST00000555354 469 ntTSL 3 BASIC6.35□□□□□ -1.39
PRPF38BQ5VTL8 MIR4270-201ENST00000581799 70 ntBASIC6.35□□□□□ -1.39
PRPF38BQ5VTL8 MIR3128-201ENST00000581957 66 ntBASIC6.35□□□□□ -1.39
PRPF38BQ5VTL8 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms