Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
UBR4Q5T4S7 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC1.42□□□□□ -2.18
UBR4Q5T4S7 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC1.42□□□□□ -2.18
UBR4Q5T4S7 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC1.42□□□□□ -2.18
UBR4Q5T4S7 AC010620.2-201ENST00000600135 313 ntBASIC1.42□□□□□ -2.18
UBR4Q5T4S7 MZT1P2-201ENST00000604387 248 ntBASIC1.42□□□□□ -2.18
UBR4Q5T4S7 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC1.42□□□□□ -2.18
UBR4Q5T4S7 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC1.42□□□□□ -2.18
UBR4Q5T4S7 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
UBR4Q5T4S7 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
UBR4Q5T4S7 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
UBR4Q5T4S7 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
UBR4Q5T4S7 AC083843.2-201ENST00000568248 6253 ntBASIC1.42□□□□□ -2.18
UBR4Q5T4S7 CDC27P3-201ENST00000635418 1910 ntBASIC1.42□□□□□ -2.18
UBR4Q5T4S7 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
UBR4Q5T4S7 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC1.42□□□□□ -2.18
UBR4Q5T4S7 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC1.42□□□□□ -2.18
UBR4Q5T4S7 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC1.42□□□□□ -2.18
UBR4Q5T4S7 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC1.42□□□□□ -2.18
UBR4Q5T4S7 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.42□□□□□ -2.18
UBR4Q5T4S7 MTCYBP31-201ENST00000438855 1122 ntBASIC1.42□□□□□ -2.18
UBR4Q5T4S7 MRPS31P2-201ENST00000451581 518 ntBASIC1.42□□□□□ -2.18
UBR4Q5T4S7 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.42□□□□□ -2.18
UBR4Q5T4S7 AL445669.2-201ENST00000454425 421 ntBASIC1.42□□□□□ -2.18
UBR4Q5T4S7 CYCSP20-201ENST00000473154 315 ntBASIC1.42□□□□□ -2.18
UBR4Q5T4S7 RPL36AP51-201ENST00000487216 318 ntBASIC1.42□□□□□ -2.18
UBR4Q5T4S7 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.42□□□□□ -2.18
UBR4Q5T4S7 MIR2276-201ENST00000516886 89 ntBASIC1.42□□□□□ -2.18
UBR4Q5T4S7 AC092451.2-201ENST00000538746 658 ntBASIC1.42□□□□□ -2.18
UBR4Q5T4S7 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC1.42□□□□□ -2.18
UBR4Q5T4S7 AC012020.1-201ENST00000624541 1728 ntBASIC1.42□□□□□ -2.18
UBR4Q5T4S7 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC1.42□□□□□ -2.18
UBR4Q5T4S7 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
UBR4Q5T4S7 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC1.42□□□□□ -2.18
UBR4Q5T4S7 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
UBR4Q5T4S7 MIR26A1-201ENST00000362205 77 ntBASIC1.42□□□□□ -2.18
UBR4Q5T4S7 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC1.42□□□□□ -2.18
UBR4Q5T4S7 RPL23AP82-202ENST00000427528 469 ntBASIC1.42□□□□□ -2.18
UBR4Q5T4S7 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.42□□□□□ -2.18
UBR4Q5T4S7 CENPBD1P1-201ENST00000464061 469 ntBASIC1.42□□□□□ -2.18
UBR4Q5T4S7 AP003497.1-201ENST00000528472 562 ntBASIC1.42□□□□□ -2.18
UBR4Q5T4S7 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC1.42□□□□□ -2.18
UBR4Q5T4S7 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.42□□□□□ -2.18
UBR4Q5T4S7 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
UBR4Q5T4S7 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC1.41□□□□□ -2.18
UBR4Q5T4S7 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC1.41□□□□□ -2.18
UBR4Q5T4S7 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.41□□□□□ -2.18
UBR4Q5T4S7 RNA5SP104-201ENST00000410989 118 ntBASIC1.41□□□□□ -2.18
UBR4Q5T4S7 HMGB1P31-201ENST00000437242 427 ntBASIC1.41□□□□□ -2.18
UBR4Q5T4S7 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC1.41□□□□□ -2.18
UBR4Q5T4S7 RPL29P29-201ENST00000448725 423 ntBASIC1.41□□□□□ -2.18
UBR4Q5T4S7 AC012557.2-201ENST00000605919 418 ntBASIC1.41□□□□□ -2.18
UBR4Q5T4S7 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC1.41□□□□□ -2.18
UBR4Q5T4S7 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
UBR4Q5T4S7 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.41□□□□□ -2.18
UBR4Q5T4S7 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
UBR4Q5T4S7 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
UBR4Q5T4S7 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
UBR4Q5T4S7 SNORD62.1-201ENST00000362541 86 ntBASIC1.41□□□□□ -2.18
UBR4Q5T4S7 AC009969.1-201ENST00000438726 172 ntBASIC1.41□□□□□ -2.18
UBR4Q5T4S7 PPP1R11P1-201ENST00000486095 376 ntBASIC1.41□□□□□ -2.18
UBR4Q5T4S7 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.41□□□□□ -2.18
UBR4Q5T4S7 AC011270.1-201ENST00000558606 583 ntBASIC1.41□□□□□ -2.18
UBR4Q5T4S7 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC1.41□□□□□ -2.18
UBR4Q5T4S7 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC1.41□□□□□ -2.18
UBR4Q5T4S7 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC1.41□□□□□ -2.18
UBR4Q5T4S7 AP001148.1-201ENST00000624124 2359 ntBASIC1.41□□□□□ -2.18
UBR4Q5T4S7 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC1.41□□□□□ -2.18
UBR4Q5T4S7 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.41□□□□□ -2.18
UBR4Q5T4S7 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC1.41□□□□□ -2.18
UBR4Q5T4S7 Y_RNA.142-201ENST00000363491 102 ntBASIC1.41□□□□□ -2.18
UBR4Q5T4S7 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC1.41□□□□□ -2.18
UBR4Q5T4S7 NANOGP5-201ENST00000424456 877 ntBASIC1.41□□□□□ -2.18
UBR4Q5T4S7 AC002075.2-201ENST00000425207 252 ntBASIC1.41□□□□□ -2.18
UBR4Q5T4S7 AC099560.2-201ENST00000457554 255 ntBASIC1.41□□□□□ -2.18
UBR4Q5T4S7 SEPT14P1-201ENST00000458703 648 ntBASIC1.41□□□□□ -2.18
UBR4Q5T4S7 AC010401.1-201ENST00000463867 348 ntBASIC1.41□□□□□ -2.18
UBR4Q5T4S7 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC1.41□□□□□ -2.18
UBR4Q5T4S7 snoZ278.1-201ENST00000517059 112 ntBASIC1.41□□□□□ -2.18
UBR4Q5T4S7 AP000859.1-201ENST00000525536 307 ntBASIC1.41□□□□□ -2.18
UBR4Q5T4S7 AC135628.1-201ENST00000568867 534 ntBASIC1.41□□□□□ -2.18
UBR4Q5T4S7 AL158062.1-201ENST00000619632 745 ntBASIC1.41□□□□□ -2.18
UBR4Q5T4S7 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC1.41□□□□□ -2.18
UBR4Q5T4S7 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
UBR4Q5T4S7 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
UBR4Q5T4S7 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC1.41□□□□□ -2.18
UBR4Q5T4S7 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC1.41□□□□□ -2.18
UBR4Q5T4S7 MIR98-201ENST00000606724 119 ntBASIC1.41□□□□□ -2.18
UBR4Q5T4S7 MIR486-1-201ENST00000612171 68 ntBASIC1.41□□□□□ -2.18
UBR4Q5T4S7 AL109933.3-201ENST00000619095 188 ntBASIC1.41□□□□□ -2.18
UBR4Q5T4S7 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.41□□□□□ -2.18
UBR4Q5T4S7 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.41□□□□□ -2.18
UBR4Q5T4S7 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC1.41□□□□□ -2.18
UBR4Q5T4S7 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
UBR4Q5T4S7 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
UBR4Q5T4S7 HMGB3P18-201ENST00000406327 590 ntBASIC1.4□□□□□ -2.18
UBR4Q5T4S7 MTCO1P53-201ENST00000441633 699 ntBASIC1.4□□□□□ -2.18
UBR4Q5T4S7 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC1.4□□□□□ -2.18
UBR4Q5T4S7 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC1.4□□□□□ -2.18
UBR4Q5T4S7 AC096725.1-201ENST00000514266 313 ntBASIC1.4□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms