Protein–RNA interactions for Protein: Q587I9

SFT2D3, Vesicle transport protein SFT2C, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFT2D3Q587I9 AC096577.2-201ENST00000611455 153 ntBASIC3.18□□□□□ -1.9
SFT2D3Q587I9 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SFT2D3Q587I9 MIR8058-201ENST00000615737 89 ntBASIC3.18□□□□□ -1.9
SFT2D3Q587I9 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
SFT2D3Q587I9 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.18□□□□□ -1.9
SFT2D3Q587I9 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.18□□□□□ -1.9
SFT2D3Q587I9 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.18□□□□□ -1.9
SFT2D3Q587I9 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SFT2D3Q587I9 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.18□□□□□ -1.9
SFT2D3Q587I9 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.17□□□□□ -1.9
SFT2D3Q587I9 AL356274.2-201ENST00000624379 3752 ntBASIC3.17□□□□□ -1.9
SFT2D3Q587I9 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SFT2D3Q587I9 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SFT2D3Q587I9 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.17□□□□□ -1.9
SFT2D3Q587I9 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SFT2D3Q587I9 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
SFT2D3Q587I9 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
SFT2D3Q587I9 Y_RNA.333-201ENST00000365274 102 ntBASIC3.17□□□□□ -1.9
SFT2D3Q587I9 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.17□□□□□ -1.9
SFT2D3Q587I9 RPL23AP47-201ENST00000408017 460 ntBASIC3.17□□□□□ -1.9
SFT2D3Q587I9 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.17□□□□□ -1.9
SFT2D3Q587I9 AL136133.1-201ENST00000413694 376 ntBASIC3.17□□□□□ -1.9
SFT2D3Q587I9 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SFT2D3Q587I9 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.17□□□□□ -1.9
SFT2D3Q587I9 RPL31P54-201ENST00000429803 370 ntBASIC3.17□□□□□ -1.9
SFT2D3Q587I9 AC115115.1-201ENST00000449927 248 ntBASIC3.17□□□□□ -1.9
SFT2D3Q587I9 NECAP1P2-201ENST00000455668 727 ntBASIC3.17□□□□□ -1.9
SFT2D3Q587I9 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.17□□□□□ -1.9
SFT2D3Q587I9 AC108860.1-201ENST00000484521 383 ntBASIC3.17□□□□□ -1.9
SFT2D3Q587I9 RNA5SP385-201ENST00000515947 110 ntBASIC3.17□□□□□ -1.9
SFT2D3Q587I9 snoZ278.1-201ENST00000517059 112 ntBASIC3.17□□□□□ -1.9
SFT2D3Q587I9 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.17□□□□□ -1.9
SFT2D3Q587I9 AC023632.1-201ENST00000518463 375 ntBASIC3.17□□□□□ -1.9
SFT2D3Q587I9 AP001317.1-201ENST00000531194 960 ntBASIC3.17□□□□□ -1.9
SFT2D3Q587I9 AC044913.1-201ENST00000557200 430 ntBASIC3.17□□□□□ -1.9
SFT2D3Q587I9 SULT1C2P1-202ENST00000562418 459 ntBASIC3.17□□□□□ -1.9
SFT2D3Q587I9 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.17□□□□□ -1.9
SFT2D3Q587I9 MIR4666A-201ENST00000580160 79 ntBASIC3.17□□□□□ -1.9
SFT2D3Q587I9 MIR4276-201ENST00000584832 70 ntBASIC3.17□□□□□ -1.9
SFT2D3Q587I9 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.17□□□□□ -1.9
SFT2D3Q587I9 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.17□□□□□ -1.9
SFT2D3Q587I9 AP005137.2-201ENST00000609238 400 ntBASIC3.17□□□□□ -1.9
SFT2D3Q587I9 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.17□□□□□ -1.9
SFT2D3Q587I9 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.17□□□□□ -1.9
SFT2D3Q587I9 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.17□□□□□ -1.9
SFT2D3Q587I9 SNORA50A-202ENST00000629536 136 ntBASIC3.17□□□□□ -1.9
SFT2D3Q587I9 AC127502.3-201ENST00000636170 1206 ntBASIC3.17□□□□□ -1.9
SFT2D3Q587I9 ZNF663P-202ENST00000641770 1131 ntBASIC3.17□□□□□ -1.9
SFT2D3Q587I9 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
SFT2D3Q587I9 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
SFT2D3Q587I9 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SFT2D3Q587I9 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
SFT2D3Q587I9 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
SFT2D3Q587I9 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SFT2D3Q587I9 AC244517.1-201ENST00000606030 2086 ntBASIC3.16□□□□□ -1.9
SFT2D3Q587I9 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SFT2D3Q587I9 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SFT2D3Q587I9 MTND5P24-201ENST00000438892 1767 ntBASIC3.16□□□□□ -1.9
SFT2D3Q587I9 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
SFT2D3Q587I9 HMGB1P5-201ENST00000255320 642 ntBASIC3.16□□□□□ -1.9
SFT2D3Q587I9 RNU5B-4P-201ENST00000363508 111 ntBASIC3.16□□□□□ -1.9
SFT2D3Q587I9 SNORA46-201ENST00000384762 135 ntBASIC3.16□□□□□ -1.9
SFT2D3Q587I9 RPL7P27-201ENST00000403775 720 ntBASIC3.16□□□□□ -1.9
SFT2D3Q587I9 AL024474.1-201ENST00000404655 591 ntBASIC3.16□□□□□ -1.9
SFT2D3Q587I9 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC3.16□□□□□ -1.9
SFT2D3Q587I9 GAPDHP27-201ENST00000447427 1020 ntBASIC3.16□□□□□ -1.9
SFT2D3Q587I9 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.16□□□□□ -1.9
SFT2D3Q587I9 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.16□□□□□ -1.9
SFT2D3Q587I9 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.16□□□□□ -1.9
SFT2D3Q587I9 NAMPTP2-201ENST00000505629 1115 ntBASIC3.16□□□□□ -1.9
SFT2D3Q587I9 APOOP4-201ENST00000513530 597 ntBASIC3.16□□□□□ -1.9
SFT2D3Q587I9 RNU6-467P-201ENST00000517027 110 ntBASIC3.16□□□□□ -1.9
SFT2D3Q587I9 IGHV3-76-201ENST00000522465 295 ntBASIC3.16□□□□□ -1.9
SFT2D3Q587I9 AC092451.2-201ENST00000538746 658 ntBASIC3.16□□□□□ -1.9
SFT2D3Q587I9 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.16□□□□□ -1.9
SFT2D3Q587I9 MTCYBP27-201ENST00000555160 670 ntBASIC3.16□□□□□ -1.9
SFT2D3Q587I9 AC087481.2-201ENST00000565492 330 ntBASIC3.16□□□□□ -1.9
SFT2D3Q587I9 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.16□□□□□ -1.9
SFT2D3Q587I9 SNORD84-203ENST00000584275 78 ntBASIC3.16□□□□□ -1.9
SFT2D3Q587I9 XIST_intron.1-201ENST00000619444 68 ntBASIC3.16□□□□□ -1.9
SFT2D3Q587I9 AC018755.4-201ENST00000619715 454 ntBASIC3.16□□□□□ -1.9
SFT2D3Q587I9 AC040168.1-201ENST00000623594 991 ntBASIC3.16□□□□□ -1.9
SFT2D3Q587I9 AC026634.1-201ENST00000634369 198 ntBASIC3.16□□□□□ -1.9
SFT2D3Q587I9 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.16□□□□□ -1.9
SFT2D3Q587I9 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SFT2D3Q587I9 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.9
SFT2D3Q587I9 AF117829.1-206ENST00000621883 3802 ntBASIC3.15□□□□□ -1.9
SFT2D3Q587I9 AC138915.3-201ENST00000562908 1389 ntBASIC3.15□□□□□ -1.9
SFT2D3Q587I9 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
SFT2D3Q587I9 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.15□□□□□ -1.9
SFT2D3Q587I9 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
SFT2D3Q587I9 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.15□□□□□ -1.91
SFT2D3Q587I9 MCTS2P-201ENST00000394552 546 ntBASIC3.15□□□□□ -1.91
SFT2D3Q587I9 RN7SKP123-201ENST00000410732 291 ntBASIC3.15□□□□□ -1.91
SFT2D3Q587I9 RPL32P35-201ENST00000415214 394 ntBASIC3.15□□□□□ -1.91
SFT2D3Q587I9 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.15□□□□□ -1.91
SFT2D3Q587I9 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.15□□□□□ -1.91
SFT2D3Q587I9 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC3.15□□□□□ -1.91
SFT2D3Q587I9 OR2AS1P-201ENST00000427827 319 ntBASIC3.15□□□□□ -1.91
SFT2D3Q587I9 AC005300.1-201ENST00000428401 373 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms