Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 AC008162.1-201ENST00000604718 254 ntBASIC6.28□□□□□ -1.4
CTC1Q2NKJ3 AL670379.4-201ENST00000605279 254 ntBASIC6.28□□□□□ -1.4
CTC1Q2NKJ3 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
CTC1Q2NKJ3 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.28□□□□□ -1.4
CTC1Q2NKJ3 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
CTC1Q2NKJ3 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CTC1Q2NKJ3 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
CTC1Q2NKJ3 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
CTC1Q2NKJ3 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CTC1Q2NKJ3 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CTC1Q2NKJ3 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CTC1Q2NKJ3 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.4
CTC1Q2NKJ3 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CTC1Q2NKJ3 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CTC1Q2NKJ3 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CTC1Q2NKJ3 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CTC1Q2NKJ3 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
CTC1Q2NKJ3 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
CTC1Q2NKJ3 RNA5-8SP7-201ENST00000363443 155 ntBASIC6.27□□□□□ -1.41
CTC1Q2NKJ3 SNORA23-201ENST00000365128 182 ntBASIC6.27□□□□□ -1.41
CTC1Q2NKJ3 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.27□□□□□ -1.41
CTC1Q2NKJ3 SNORD115-7-201ENST00000365306 82 ntBASIC6.27□□□□□ -1.41
CTC1Q2NKJ3 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
CTC1Q2NKJ3 AC097713.2-201ENST00000430199 356 ntBASIC6.27□□□□□ -1.41
CTC1Q2NKJ3 AL353997.1-201ENST00000432936 108 ntBASIC6.27□□□□□ -1.41
CTC1Q2NKJ3 RPS15AP27-201ENST00000449183 343 ntBASIC6.27□□□□□ -1.41
CTC1Q2NKJ3 AL031274.1-201ENST00000450334 232 ntBASIC6.27□□□□□ -1.41
CTC1Q2NKJ3 DYNLL1P5-201ENST00000467158 270 ntBASIC6.27□□□□□ -1.41
CTC1Q2NKJ3 OR2AO1P-201ENST00000476497 403 ntBASIC6.27□□□□□ -1.41
CTC1Q2NKJ3 AP002812.1-201ENST00000495378 474 ntBASIC6.27□□□□□ -1.41
CTC1Q2NKJ3 RPS24P16-201ENST00000497294 392 ntBASIC6.27□□□□□ -1.41
CTC1Q2NKJ3 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.27□□□□□ -1.41
CTC1Q2NKJ3 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.27□□□□□ -1.41
CTC1Q2NKJ3 MIR4643-201ENST00000577473 78 ntBASIC6.27□□□□□ -1.41
CTC1Q2NKJ3 MIR3144-201ENST00000579460 79 ntBASIC6.27□□□□□ -1.41
CTC1Q2NKJ3 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.27□□□□□ -1.41
CTC1Q2NKJ3 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CTC1Q2NKJ3 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC6.27□□□□□ -1.41
CTC1Q2NKJ3 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC6.27□□□□□ -1.41
CTC1Q2NKJ3 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.27□□□□□ -1.41
CTC1Q2NKJ3 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CTC1Q2NKJ3 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CTC1Q2NKJ3 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CTC1Q2NKJ3 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CTC1Q2NKJ3 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CTC1Q2NKJ3 AC022164.1-201ENST00000568767 2673 ntBASIC6.27□□□□□ -1.41
CTC1Q2NKJ3 LINC02019-201ENST00000608605 2060 ntBASIC6.27□□□□□ -1.41
CTC1Q2NKJ3 HAUS6P2-201ENST00000433254 2404 ntBASIC6.27□□□□□ -1.41
CTC1Q2NKJ3 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
CTC1Q2NKJ3 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
CTC1Q2NKJ3 AC025470.1-201ENST00000510053 2032 ntBASIC6.26□□□□□ -1.41
CTC1Q2NKJ3 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
CTC1Q2NKJ3 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CTC1Q2NKJ3 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.26□□□□□ -1.41
CTC1Q2NKJ3 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.26□□□□□ -1.41
CTC1Q2NKJ3 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CTC1Q2NKJ3 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
CTC1Q2NKJ3 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC6.26□□□□□ -1.41
CTC1Q2NKJ3 AC140134.1-201ENST00000511830 3544 ntBASIC6.26□□□□□ -1.41
CTC1Q2NKJ3 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.26□□□□□ -1.41
CTC1Q2NKJ3 Y_RNA.43-201ENST00000362670 111 ntBASIC6.26□□□□□ -1.41
CTC1Q2NKJ3 RNA5SP375-201ENST00000362975 119 ntBASIC6.26□□□□□ -1.41
CTC1Q2NKJ3 U3.11-201ENST00000364476 212 ntBASIC6.26□□□□□ -1.41
CTC1Q2NKJ3 Y_RNA.418-201ENST00000384029 102 ntBASIC6.26□□□□□ -1.41
CTC1Q2NKJ3 MIR433-201ENST00000384837 93 ntBASIC6.26□□□□□ -1.41
CTC1Q2NKJ3 RNU11-201ENST00000387069 134 ntBASIC6.26□□□□□ -1.41
CTC1Q2NKJ3 AC140479.3-201ENST00000418944 1126 ntBASIC6.26□□□□□ -1.41
CTC1Q2NKJ3 RPL7P46-201ENST00000425129 740 ntBASIC6.26□□□□□ -1.41
CTC1Q2NKJ3 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC6.26□□□□□ -1.41
CTC1Q2NKJ3 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC6.26□□□□□ -1.41
CTC1Q2NKJ3 HMGB3P24-201ENST00000433260 622 ntBASIC6.26□□□□□ -1.41
CTC1Q2NKJ3 AL390119.1-201ENST00000440329 312 ntBASIC6.26□□□□□ -1.41
CTC1Q2NKJ3 NOTCH2P1-201ENST00000443481 624 ntBASIC6.26□□□□□ -1.41
CTC1Q2NKJ3 TPT1P12-201ENST00000448968 492 ntBASIC6.26□□□□□ -1.41
CTC1Q2NKJ3 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC6.26□□□□□ -1.41
CTC1Q2NKJ3 FTH1P2-201ENST00000466086 412 ntBASIC6.26□□□□□ -1.41
CTC1Q2NKJ3 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC6.26□□□□□ -1.41
CTC1Q2NKJ3 AC110792.1-201ENST00000491826 472 ntBASIC6.26□□□□□ -1.41
CTC1Q2NKJ3 IGKV2-23-201ENST00000518729 323 ntBASIC6.26□□□□□ -1.41
CTC1Q2NKJ3 RAB9BP1-201ENST00000519581 626 ntBASIC6.26□□□□□ -1.41
CTC1Q2NKJ3 STX3-204ENST00000530221 534 ntTSL 5 BASIC6.26□□□□□ -1.41
CTC1Q2NKJ3 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.26□□□□□ -1.41
CTC1Q2NKJ3 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC6.26□□□□□ -1.41
CTC1Q2NKJ3 SNORD39.3-201ENST00000584451 71 ntBASIC6.26□□□□□ -1.41
CTC1Q2NKJ3 AL360012.1-201ENST00000602813 131 ntBASIC6.26□□□□□ -1.41
CTC1Q2NKJ3 AL512782.1-201ENST00000603093 364 ntBASIC6.26□□□□□ -1.41
CTC1Q2NKJ3 AC123768.4-201ENST00000616244 701 ntBASIC6.26□□□□□ -1.41
CTC1Q2NKJ3 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
CTC1Q2NKJ3 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
CTC1Q2NKJ3 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
CTC1Q2NKJ3 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.26□□□□□ -1.41
CTC1Q2NKJ3 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
CTC1Q2NKJ3 PARP4P2-201ENST00000446672 3326 ntBASIC6.26□□□□□ -1.41
CTC1Q2NKJ3 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.26□□□□□ -1.41
CTC1Q2NKJ3 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.26□□□□□ -1.41
CTC1Q2NKJ3 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
CTC1Q2NKJ3 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.26□□□□□ -1.41
CTC1Q2NKJ3 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CTC1Q2NKJ3 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CTC1Q2NKJ3 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms