Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 AC108667.1-201ENST00000428618 249 ntBASIC2.16□□□□□ -2.06
CACNA1EQ15878 NIPA2P2-201ENST00000496376 1083 ntBASIC2.16□□□□□ -2.06
CACNA1EQ15878 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC2.16□□□□□ -2.06
CACNA1EQ15878 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.16□□□□□ -2.06
CACNA1EQ15878 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC2.16□□□□□ -2.06
CACNA1EQ15878 RNA5SP76-201ENST00000516277 87 ntBASIC2.16□□□□□ -2.06
CACNA1EQ15878 AP001207.1-201ENST00000524051 481 ntBASIC2.16□□□□□ -2.06
CACNA1EQ15878 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC2.16□□□□□ -2.06
CACNA1EQ15878 ELOCP31-201ENST00000540463 467 ntBASIC2.16□□□□□ -2.06
CACNA1EQ15878 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC2.16□□□□□ -2.06
CACNA1EQ15878 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.16□□□□□ -2.06
CACNA1EQ15878 AP001521.1-201ENST00000609150 300 ntBASIC2.16□□□□□ -2.06
CACNA1EQ15878 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.16□□□□□ -2.06
CACNA1EQ15878 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC2.16□□□□□ -2.06
CACNA1EQ15878 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.16□□□□□ -2.06
CACNA1EQ15878 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.16□□□□□ -2.06
CACNA1EQ15878 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CACNA1EQ15878 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CACNA1EQ15878 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CACNA1EQ15878 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.16□□□□□ -2.06
CACNA1EQ15878 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
CACNA1EQ15878 NPM1P10-201ENST00000398310 865 ntBASIC2.16□□□□□ -2.06
CACNA1EQ15878 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.16□□□□□ -2.06
CACNA1EQ15878 SCARNA16.3-201ENST00000516595 184 ntBASIC2.16□□□□□ -2.06
CACNA1EQ15878 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC2.15□□□□□ -2.06
CACNA1EQ15878 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
CACNA1EQ15878 TMEM161BP1-201ENST00000457388 1457 ntBASIC2.15□□□□□ -2.06
CACNA1EQ15878 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.15□□□□□ -2.07
CACNA1EQ15878 MTND5P23-201ENST00000430812 1655 ntBASIC2.15□□□□□ -2.07
CACNA1EQ15878 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
CACNA1EQ15878 MIR499A-201ENST00000384903 122 ntBASIC2.15□□□□□ -2.07
CACNA1EQ15878 SNORA11.4-201ENST00000408823 129 ntBASIC2.15□□□□□ -2.07
CACNA1EQ15878 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC2.15□□□□□ -2.07
CACNA1EQ15878 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.15□□□□□ -2.07
CACNA1EQ15878 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.15□□□□□ -2.07
CACNA1EQ15878 SNRPGP9-201ENST00000456025 225 ntBASIC2.15□□□□□ -2.07
CACNA1EQ15878 RNU6-964P-201ENST00000516524 69 ntBASIC2.15□□□□□ -2.07
CACNA1EQ15878 AC025281.1-201ENST00000567026 265 ntBASIC2.15□□□□□ -2.07
CACNA1EQ15878 AC006116.7-201ENST00000590141 756 ntBASIC2.15□□□□□ -2.07
CACNA1EQ15878 MTND5P29-201ENST00000458676 1807 ntBASIC2.15□□□□□ -2.07
CACNA1EQ15878 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
CACNA1EQ15878 AC010329.2-201ENST00000595195 2737 ntBASIC2.15□□□□□ -2.07
CACNA1EQ15878 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
CACNA1EQ15878 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CACNA1EQ15878 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.14□□□□□ -2.07
CACNA1EQ15878 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.14□□□□□ -2.07
CACNA1EQ15878 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
CACNA1EQ15878 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.14□□□□□ -2.07
CACNA1EQ15878 TRAV11-201ENST00000539512 339 ntBASIC2.14□□□□□ -2.07
CACNA1EQ15878 AL356266.1-201ENST00000623311 483 ntBASIC2.14□□□□□ -2.07
CACNA1EQ15878 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CACNA1EQ15878 AC007342.7-201ENST00000624610 2337 ntBASIC2.14□□□□□ -2.07
CACNA1EQ15878 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
CACNA1EQ15878 RN7SKP44-201ENST00000363602 316 ntBASIC2.14□□□□□ -2.07
CACNA1EQ15878 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC2.14□□□□□ -2.07
CACNA1EQ15878 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC2.14□□□□□ -2.07
CACNA1EQ15878 RNA5SP200-201ENST00000516360 103 ntBASIC2.14□□□□□ -2.07
CACNA1EQ15878 RN7SKP82-201ENST00000516786 223 ntBASIC2.14□□□□□ -2.07
CACNA1EQ15878 HSPE1P18-201ENST00000517602 280 ntBASIC2.14□□□□□ -2.07
CACNA1EQ15878 AC090819.1-201ENST00000523800 1111 ntBASIC2.14□□□□□ -2.07
CACNA1EQ15878 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.14□□□□□ -2.07
CACNA1EQ15878 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.14□□□□□ -2.07
CACNA1EQ15878 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.14□□□□□ -2.07
CACNA1EQ15878 MIR6845-201ENST00000613182 61 ntBASIC2.14□□□□□ -2.07
CACNA1EQ15878 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.14□□□□□ -2.07
CACNA1EQ15878 AC095050.2-201ENST00000510748 1458 ntBASIC2.14□□□□□ -2.07
CACNA1EQ15878 AC107021.2-201ENST00000567714 2095 ntBASIC2.14□□□□□ -2.07
CACNA1EQ15878 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.13□□□□□ -2.07
CACNA1EQ15878 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.13□□□□□ -2.07
CACNA1EQ15878 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CACNA1EQ15878 MIR221-201ENST00000385135 110 ntBASIC2.13□□□□□ -2.07
CACNA1EQ15878 SNORA48.3-201ENST00000391081 134 ntBASIC2.13□□□□□ -2.07
CACNA1EQ15878 AL139156.1-201ENST00000412785 841 ntBASIC2.13□□□□□ -2.07
CACNA1EQ15878 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.13□□□□□ -2.07
CACNA1EQ15878 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC2.13□□□□□ -2.07
CACNA1EQ15878 AC244505.4-201ENST00000434905 287 ntBASIC2.13□□□□□ -2.07
CACNA1EQ15878 RPS15AP28-201ENST00000435088 386 ntBASIC2.13□□□□□ -2.07
CACNA1EQ15878 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.13□□□□□ -2.07
CACNA1EQ15878 SSXP5-201ENST00000443473 287 ntBASIC2.13□□□□□ -2.07
CACNA1EQ15878 AC011753.1-201ENST00000451001 220 ntBASIC2.13□□□□□ -2.07
CACNA1EQ15878 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.13□□□□□ -2.07
CACNA1EQ15878 MTCYBP20-201ENST00000524239 1129 ntBASIC2.13□□□□□ -2.07
CACNA1EQ15878 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC2.13□□□□□ -2.07
CACNA1EQ15878 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.13□□□□□ -2.07
CACNA1EQ15878 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.13□□□□□ -2.07
CACNA1EQ15878 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC2.13□□□□□ -2.07
CACNA1EQ15878 AP002967.1-201ENST00000624203 539 ntBASIC2.13□□□□□ -2.07
CACNA1EQ15878 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
CACNA1EQ15878 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
CACNA1EQ15878 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC2.13□□□□□ -2.07
CACNA1EQ15878 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.13□□□□□ -2.07
CACNA1EQ15878 AL512646.1-201ENST00000269395 1077 ntBASIC2.13□□□□□ -2.07
CACNA1EQ15878 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CACNA1EQ15878 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.13□□□□□ -2.07
CACNA1EQ15878 AL354719.1-201ENST00000406535 843 ntBASIC2.13□□□□□ -2.07
CACNA1EQ15878 SPA17P1-201ENST00000416656 452 ntBASIC2.13□□□□□ -2.07
CACNA1EQ15878 AC098826.1-201ENST00000433943 471 ntBASIC2.13□□□□□ -2.07
CACNA1EQ15878 AC004263.1-201ENST00000479327 332 ntBASIC2.13□□□□□ -2.07
CACNA1EQ15878 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.13□□□□□ -2.07
CACNA1EQ15878 CCNHP1-201ENST00000513311 678 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms