Protein–RNA interactions for Protein: Q13509

TUBB3, Tubulin beta-3 chain, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3Q13509 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
TUBB3Q13509 AC006971.1-201ENST00000407916 4486 ntBASIC4.42□□□□□ -1.7
TUBB3Q13509 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TUBB3Q13509 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.42□□□□□ -1.7
TUBB3Q13509 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TUBB3Q13509 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.42□□□□□ -1.7
TUBB3Q13509 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.42□□□□□ -1.7
TUBB3Q13509 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
TUBB3Q13509 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.42□□□□□ -1.7
TUBB3Q13509 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TUBB3Q13509 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TUBB3Q13509 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.42□□□□□ -1.7
TUBB3Q13509 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.42□□□□□ -1.7
TUBB3Q13509 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
TUBB3Q13509 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.42□□□□□ -1.7
TUBB3Q13509 RNU6-1243P-201ENST00000364028 107 ntBASIC4.42□□□□□ -1.7
TUBB3Q13509 MIR513A2-201ENST00000385249 127 ntBASIC4.42□□□□□ -1.7
TUBB3Q13509 U3.22-201ENST00000391120 215 ntBASIC4.42□□□□□ -1.7
TUBB3Q13509 CALM2P3-201ENST00000400429 449 ntBASIC4.42□□□□□ -1.7
TUBB3Q13509 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TUBB3Q13509 AL590002.1-201ENST00000406554 418 ntBASIC4.42□□□□□ -1.7
TUBB3Q13509 CCNG1P1-201ENST00000406783 885 ntBASIC4.42□□□□□ -1.7
TUBB3Q13509 RAP1BP3-201ENST00000407180 549 ntBASIC4.42□□□□□ -1.7
TUBB3Q13509 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.42□□□□□ -1.7
TUBB3Q13509 RNU2-21P-201ENST00000410368 188 ntBASIC4.42□□□□□ -1.7
TUBB3Q13509 ELOCP19-201ENST00000411919 318 ntBASIC4.42□□□□□ -1.7
TUBB3Q13509 AC069157.1-201ENST00000421749 137 ntBASIC4.42□□□□□ -1.7
TUBB3Q13509 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC4.42□□□□□ -1.7
TUBB3Q13509 ISCA1P6-201ENST00000427740 390 ntBASIC4.42□□□□□ -1.7
TUBB3Q13509 AC091390.1-201ENST00000433904 331 ntBASIC4.42□□□□□ -1.7
TUBB3Q13509 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC4.42□□□□□ -1.7
TUBB3Q13509 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.42□□□□□ -1.7
TUBB3Q13509 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.42□□□□□ -1.7
TUBB3Q13509 HSPE1P28-201ENST00000443139 211 ntBASIC4.42□□□□□ -1.7
TUBB3Q13509 RPL17P49-201ENST00000443728 411 ntBASIC4.42□□□□□ -1.7
TUBB3Q13509 VN1R34P-201ENST00000447387 883 ntBASIC4.42□□□□□ -1.7
TUBB3Q13509 AC079448.1-201ENST00000449377 373 ntBASIC4.42□□□□□ -1.7
TUBB3Q13509 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.42□□□□□ -1.7
TUBB3Q13509 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.42□□□□□ -1.7
TUBB3Q13509 MTCO3P20-201ENST00000454926 688 ntBASIC4.42□□□□□ -1.7
TUBB3Q13509 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.42□□□□□ -1.7
TUBB3Q13509 RPL5P30-201ENST00000465511 891 ntBASIC4.42□□□□□ -1.7
TUBB3Q13509 RPS23P7-201ENST00000466210 444 ntBASIC4.42□□□□□ -1.7
TUBB3Q13509 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.42□□□□□ -1.7
TUBB3Q13509 AC026979.1-201ENST00000492525 396 ntBASIC4.42□□□□□ -1.7
TUBB3Q13509 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.42□□□□□ -1.7
TUBB3Q13509 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.42□□□□□ -1.7
TUBB3Q13509 AC006499.6-201ENST00000511169 607 ntBASIC4.42□□□□□ -1.7
TUBB3Q13509 AC093840.1-201ENST00000511599 336 ntBASIC4.42□□□□□ -1.7
TUBB3Q13509 AC007016.1-201ENST00000512110 244 ntBASIC4.42□□□□□ -1.7
TUBB3Q13509 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC4.42□□□□□ -1.7
TUBB3Q13509 CENPUP2-201ENST00000555897 1186 ntBASIC4.42□□□□□ -1.7
TUBB3Q13509 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC4.42□□□□□ -1.7
TUBB3Q13509 AC084783.1-201ENST00000565846 910 ntBASIC4.42□□□□□ -1.7
TUBB3Q13509 RPL23AP97-201ENST00000568955 471 ntBASIC4.42□□□□□ -1.7
TUBB3Q13509 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TUBB3Q13509 MIR3682-201ENST00000581338 84 ntBASIC4.42□□□□□ -1.7
TUBB3Q13509 AC067852.4-201ENST00000590314 478 ntBASIC4.42□□□□□ -1.7
TUBB3Q13509 CKS1BP3-201ENST00000600888 237 ntBASIC4.42□□□□□ -1.7
TUBB3Q13509 AC008638.3-201ENST00000603341 463 ntBASIC4.42□□□□□ -1.7
TUBB3Q13509 AC008782.1-201ENST00000603386 430 ntBASIC4.42□□□□□ -1.7
TUBB3Q13509 AL031666.3-201ENST00000609320 1006 ntBASIC4.42□□□□□ -1.7
TUBB3Q13509 AC083809.1-201ENST00000615051 472 ntBASIC4.42□□□□□ -1.7
TUBB3Q13509 AL359880.1-201ENST00000621879 266 ntBASIC4.42□□□□□ -1.7
TUBB3Q13509 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
TUBB3Q13509 AC019226.1-201ENST00000625666 515 ntBASIC4.42□□□□□ -1.7
TUBB3Q13509 CYP3A51P-201ENST00000633513 256 ntBASIC4.42□□□□□ -1.7
TUBB3Q13509 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.42□□□□□ -1.7
TUBB3Q13509 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TUBB3Q13509 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.42□□□□□ -1.7
TUBB3Q13509 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.42□□□□□ -1.7
TUBB3Q13509 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.42□□□□□ -1.7
TUBB3Q13509 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.42□□□□□ -1.7
TUBB3Q13509 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TUBB3Q13509 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.42□□□□□ -1.7
TUBB3Q13509 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TUBB3Q13509 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TUBB3Q13509 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TUBB3Q13509 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
TUBB3Q13509 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TUBB3Q13509 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
TUBB3Q13509 AL049780.3-201ENST00000624612 1583 ntBASIC4.41□□□□□ -1.7
TUBB3Q13509 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TUBB3Q13509 GNG5P1-201ENST00000255500 204 ntBASIC4.41□□□□□ -1.7
TUBB3Q13509 Y_RNA.9-201ENST00000362354 101 ntBASIC4.41□□□□□ -1.7
TUBB3Q13509 Y_RNA.46-201ENST00000362695 102 ntBASIC4.41□□□□□ -1.7
TUBB3Q13509 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
TUBB3Q13509 RPL7P25-201ENST00000404151 721 ntBASIC4.41□□□□□ -1.7
TUBB3Q13509 FCF1P10-201ENST00000407590 479 ntBASIC4.41□□□□□ -1.7
TUBB3Q13509 MIR1277-201ENST00000408536 78 ntBASIC4.41□□□□□ -1.7
TUBB3Q13509 USP9YP6-201ENST00000413550 854 ntBASIC4.41□□□□□ -1.7
TUBB3Q13509 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.41□□□□□ -1.7
TUBB3Q13509 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC4.41□□□□□ -1.7
TUBB3Q13509 MTCYBP24-201ENST00000420387 1106 ntBASIC4.41□□□□□ -1.7
TUBB3Q13509 AL592293.2-201ENST00000422292 996 ntBASIC4.41□□□□□ -1.7
TUBB3Q13509 AL589872.1-201ENST00000426602 288 ntBASIC4.41□□□□□ -1.7
TUBB3Q13509 AC092017.2-201ENST00000427600 362 ntBASIC4.41□□□□□ -1.7
TUBB3Q13509 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC4.41□□□□□ -1.7
TUBB3Q13509 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.41□□□□□ -1.7
TUBB3Q13509 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms