Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PCDH1Q08174 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.36□□□□□ -1.55
PCDH1Q08174 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.36□□□□□ -1.55
PCDH1Q08174 RN7SL753P-201ENST00000581238 290 ntBASIC5.36□□□□□ -1.55
PCDH1Q08174 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC5.36□□□□□ -1.55
PCDH1Q08174 AL442067.1-201ENST00000613261 223 ntBASIC5.36□□□□□ -1.55
PCDH1Q08174 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC5.36□□□□□ -1.55
PCDH1Q08174 AL355365.1-201ENST00000616480 294 ntBASIC5.36□□□□□ -1.55
PCDH1Q08174 AP005431.1-201ENST00000618479 319 ntBASIC5.36□□□□□ -1.55
PCDH1Q08174 AL445363.3-201ENST00000623080 671 ntBASIC5.36□□□□□ -1.55
PCDH1Q08174 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.36□□□□□ -1.55
PCDH1Q08174 MIR4302-201ENST00000638058 60 ntBASIC5.36□□□□□ -1.55
PCDH1Q08174 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC5.36□□□□□ -1.55
PCDH1Q08174 EFTUD1P2-201ENST00000514817 1603 ntBASIC5.36□□□□□ -1.55
PCDH1Q08174 MFF-206ENST00000392059 1710 ntTSL 5 BASIC5.36□□□□□ -1.55
PCDH1Q08174 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.36□□□□□ -1.55
PCDH1Q08174 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.36□□□□□ -1.55
PCDH1Q08174 ZNF33CP-201ENST00000432492 2030 ntBASIC5.36□□□□□ -1.55
PCDH1Q08174 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
PCDH1Q08174 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PCDH1Q08174 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.36□□□□□ -1.55
PCDH1Q08174 AC097461.1-201ENST00000568928 2821 ntBASIC5.36□□□□□ -1.55
PCDH1Q08174 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
PCDH1Q08174 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
PCDH1Q08174 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.35□□□□□ -1.55
PCDH1Q08174 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PCDH1Q08174 EXOC5P1-201ENST00000510543 1969 ntBASIC5.35□□□□□ -1.55
PCDH1Q08174 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.35□□□□□ -1.55
PCDH1Q08174 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.35□□□□□ -1.55
PCDH1Q08174 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.35□□□□□ -1.55
PCDH1Q08174 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
PCDH1Q08174 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PCDH1Q08174 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PCDH1Q08174 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PCDH1Q08174 RNU6-702P-201ENST00000364982 107 ntBASIC5.35□□□□□ -1.55
PCDH1Q08174 RNU6-1127P-201ENST00000384580 107 ntBASIC5.35□□□□□ -1.55
PCDH1Q08174 MIR450B-201ENST00000401182 78 ntBASIC5.35□□□□□ -1.55
PCDH1Q08174 AL391417.1-201ENST00000404100 426 ntBASIC5.35□□□□□ -1.55
PCDH1Q08174 AC009310.1-201ENST00000414414 451 ntBASIC5.35□□□□□ -1.55
PCDH1Q08174 RPL7P10-201ENST00000417407 739 ntBASIC5.35□□□□□ -1.55
PCDH1Q08174 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.35□□□□□ -1.55
PCDH1Q08174 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC5.35□□□□□ -1.55
PCDH1Q08174 SNAP23P1-201ENST00000433229 246 ntBASIC5.35□□□□□ -1.55
PCDH1Q08174 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.35□□□□□ -1.55
PCDH1Q08174 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC5.35□□□□□ -1.55
PCDH1Q08174 AL162388.1-201ENST00000450912 352 ntBASIC5.35□□□□□ -1.55
PCDH1Q08174 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.35□□□□□ -1.55
PCDH1Q08174 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC5.35□□□□□ -1.55
PCDH1Q08174 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC5.35□□□□□ -1.55
PCDH1Q08174 AC097473.1-201ENST00000508142 408 ntBASIC5.35□□□□□ -1.55
PCDH1Q08174 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.35□□□□□ -1.55
PCDH1Q08174 AP000859.1-201ENST00000525536 307 ntBASIC5.35□□□□□ -1.55
PCDH1Q08174 AC063949.1-201ENST00000552900 865 ntBASIC5.35□□□□□ -1.55
PCDH1Q08174 AL161670.1-201ENST00000554348 137 ntBASIC5.35□□□□□ -1.55
PCDH1Q08174 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.35□□□□□ -1.55
PCDH1Q08174 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.35□□□□□ -1.55
PCDH1Q08174 MIR4660-201ENST00000583549 74 ntBASIC5.35□□□□□ -1.55
PCDH1Q08174 AC116447.1-201ENST00000613153 453 ntBASIC5.35□□□□□ -1.55
PCDH1Q08174 AC010378.1-201ENST00000619270 362 ntBASIC5.35□□□□□ -1.55
PCDH1Q08174 PLCE1P1-201ENST00000622094 305 ntBASIC5.35□□□□□ -1.55
PCDH1Q08174 AL161637.1-201ENST00000622380 412 ntBASIC5.35□□□□□ -1.55
PCDH1Q08174 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.35□□□□□ -1.55
PCDH1Q08174 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.35□□□□□ -1.55
PCDH1Q08174 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PCDH1Q08174 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PCDH1Q08174 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PCDH1Q08174 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.35□□□□□ -1.55
PCDH1Q08174 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.35□□□□□ -1.55
PCDH1Q08174 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
PCDH1Q08174 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
PCDH1Q08174 AC103710.2-202ENST00000641454 2853 ntBASIC5.35□□□□□ -1.55
PCDH1Q08174 SRRM1P3-201ENST00000426911 2678 ntBASIC5.35□□□□□ -1.55
PCDH1Q08174 AP000756.2-201ENST00000624168 2567 ntBASIC5.35□□□□□ -1.55
PCDH1Q08174 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PCDH1Q08174 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.35□□□□□ -1.55
PCDH1Q08174 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PCDH1Q08174 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.35□□□□□ -1.55
PCDH1Q08174 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.35□□□□□ -1.55
PCDH1Q08174 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
PCDH1Q08174 AC008758.3-201ENST00000507003 1829 ntBASIC5.34□□□□□ -1.55
PCDH1Q08174 AC092376.2-201ENST00000622621 4116 ntBASIC5.34□□□□□ -1.55
PCDH1Q08174 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PCDH1Q08174 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PCDH1Q08174 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PCDH1Q08174 AC068870.1-201ENST00000563737 2455 ntBASIC5.34□□□□□ -1.55
PCDH1Q08174 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
PCDH1Q08174 GABPAP-201ENST00000419271 1356 ntBASIC5.34□□□□□ -1.55
PCDH1Q08174 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PCDH1Q08174 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PCDH1Q08174 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PCDH1Q08174 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.34□□□□□ -1.55
PCDH1Q08174 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PCDH1Q08174 RNA5SP46-201ENST00000362370 120 ntBASIC5.34□□□□□ -1.55
PCDH1Q08174 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
PCDH1Q08174 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
PCDH1Q08174 SNORA75B-201ENST00000384053 137 ntBASIC5.34□□□□□ -1.55
PCDH1Q08174 SNORD51-201ENST00000384320 80 ntBASIC5.34□□□□□ -1.55
PCDH1Q08174 MIR551A-201ENST00000385042 96 ntBASIC5.34□□□□□ -1.55
PCDH1Q08174 RN7SKP159-201ENST00000410657 292 ntBASIC5.34□□□□□ -1.55
PCDH1Q08174 AC099336.2-201ENST00000422457 254 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms