Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 AC092641.1-201ENST00000440229 772 ntBASIC3.35□□□□□ -1.87
CDKL1Q00532 AC007327.1-201ENST00000447461 264 ntBASIC3.35□□□□□ -1.87
CDKL1Q00532 AC008264.1-201ENST00000447612 367 ntBASIC3.35□□□□□ -1.87
CDKL1Q00532 RPL39P6-201ENST00000448289 150 ntBASIC3.35□□□□□ -1.87
CDKL1Q00532 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.35□□□□□ -1.87
CDKL1Q00532 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.35□□□□□ -1.87
CDKL1Q00532 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.35□□□□□ -1.87
CDKL1Q00532 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.35□□□□□ -1.87
CDKL1Q00532 CENPBD1P1-201ENST00000464061 469 ntBASIC3.35□□□□□ -1.87
CDKL1Q00532 AC078918.1-201ENST00000498515 228 ntBASIC3.35□□□□□ -1.87
CDKL1Q00532 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.35□□□□□ -1.87
CDKL1Q00532 AC114967.1-201ENST00000504890 259 ntBASIC3.35□□□□□ -1.87
CDKL1Q00532 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CDKL1Q00532 RNU6-27P-201ENST00000516146 107 ntBASIC3.35□□□□□ -1.87
CDKL1Q00532 RN7SKP244-201ENST00000516513 307 ntBASIC3.35□□□□□ -1.87
CDKL1Q00532 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.35□□□□□ -1.87
CDKL1Q00532 AC107934.2-201ENST00000518653 310 ntBASIC3.35□□□□□ -1.87
CDKL1Q00532 AC068657.1-201ENST00000520807 306 ntBASIC3.35□□□□□ -1.87
CDKL1Q00532 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.35□□□□□ -1.87
CDKL1Q00532 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.35□□□□□ -1.87
CDKL1Q00532 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.35□□□□□ -1.87
CDKL1Q00532 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.35□□□□□ -1.87
CDKL1Q00532 AC125611.1-201ENST00000549563 229 ntBASIC3.35□□□□□ -1.87
CDKL1Q00532 AC126177.3-201ENST00000551839 688 ntBASIC3.35□□□□□ -1.87
CDKL1Q00532 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC3.35□□□□□ -1.87
CDKL1Q00532 AC131235.4-201ENST00000609288 620 ntBASIC3.35□□□□□ -1.87
CDKL1Q00532 AC107075.1-201ENST00000613695 314 ntBASIC3.35□□□□□ -1.87
CDKL1Q00532 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CDKL1Q00532 CYP3A51P-201ENST00000633513 256 ntBASIC3.35□□□□□ -1.87
CDKL1Q00532 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CDKL1Q00532 ZNF542P-204ENST00000482727 1305 ntBASIC3.35□□□□□ -1.87
CDKL1Q00532 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CDKL1Q00532 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CDKL1Q00532 NUP58P1-201ENST00000502546 1738 ntBASIC3.35□□□□□ -1.87
CDKL1Q00532 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CDKL1Q00532 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.35□□□□□ -1.87
CDKL1Q00532 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CDKL1Q00532 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.35□□□□□ -1.87
CDKL1Q00532 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.35□□□□□ -1.87
CDKL1Q00532 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CDKL1Q00532 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CDKL1Q00532 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.87
CDKL1Q00532 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CDKL1Q00532 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
CDKL1Q00532 MIR148B-201ENST00000362252 99 ntBASIC3.34□□□□□ -1.87
CDKL1Q00532 RNU6-216P-201ENST00000363282 104 ntBASIC3.34□□□□□ -1.87
CDKL1Q00532 Y_RNA.192-201ENST00000363977 102 ntBASIC3.34□□□□□ -1.87
CDKL1Q00532 RNU6-335P-201ENST00000364563 113 ntBASIC3.34□□□□□ -1.87
CDKL1Q00532 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CDKL1Q00532 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
CDKL1Q00532 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
CDKL1Q00532 RNU6-636P-201ENST00000384598 107 ntBASIC3.34□□□□□ -1.87
CDKL1Q00532 U3.29-201ENST00000391296 212 ntBASIC3.34□□□□□ -1.87
CDKL1Q00532 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CDKL1Q00532 CRYBB2P1-203ENST00000415709 538 ntBASIC3.34□□□□□ -1.87
CDKL1Q00532 PTP4A1P5-201ENST00000420305 455 ntBASIC3.34□□□□□ -1.87
CDKL1Q00532 PSMA6P3-201ENST00000428242 164 ntBASIC3.34□□□□□ -1.87
CDKL1Q00532 USP9YP31-201ENST00000431405 881 ntBASIC3.34□□□□□ -1.87
CDKL1Q00532 AL606517.1-201ENST00000446914 387 ntBASIC3.34□□□□□ -1.87
CDKL1Q00532 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.34□□□□□ -1.87
CDKL1Q00532 AC005297.2-201ENST00000450430 606 ntBASIC3.34□□□□□ -1.87
CDKL1Q00532 AC097262.1-201ENST00000452559 548 ntBASIC3.34□□□□□ -1.87
CDKL1Q00532 CEACAMP4-201ENST00000457676 421 ntBASIC3.34□□□□□ -1.87
CDKL1Q00532 RPL9P32-201ENST00000464118 620 ntBASIC3.34□□□□□ -1.87
CDKL1Q00532 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.34□□□□□ -1.87
CDKL1Q00532 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.34□□□□□ -1.87
CDKL1Q00532 SNORA64.4-201ENST00000516632 81 ntBASIC3.34□□□□□ -1.87
CDKL1Q00532 AC026403.1-201ENST00000518938 295 ntBASIC3.34□□□□□ -1.87
CDKL1Q00532 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC3.34□□□□□ -1.87
CDKL1Q00532 AP004371.1-201ENST00000525240 214 ntBASIC3.34□□□□□ -1.87
CDKL1Q00532 AC024224.1-201ENST00000538284 609 ntBASIC3.34□□□□□ -1.87
CDKL1Q00532 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC3.34□□□□□ -1.87
CDKL1Q00532 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.34□□□□□ -1.87
CDKL1Q00532 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.34□□□□□ -1.87
CDKL1Q00532 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.34□□□□□ -1.87
CDKL1Q00532 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.34□□□□□ -1.87
CDKL1Q00532 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.34□□□□□ -1.87
CDKL1Q00532 AC067852.3-201ENST00000589177 561 ntBASIC3.34□□□□□ -1.87
CDKL1Q00532 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.34□□□□□ -1.87
CDKL1Q00532 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.34□□□□□ -1.87
CDKL1Q00532 AL731566.2-201ENST00000618971 317 ntBASIC3.34□□□□□ -1.87
CDKL1Q00532 AC039056.2-201ENST00000622261 511 ntBASIC3.34□□□□□ -1.87
CDKL1Q00532 AC090772.4-201ENST00000623599 362 ntBASIC3.34□□□□□ -1.87
CDKL1Q00532 AC091925.2-201ENST00000625059 256 ntBASIC3.34□□□□□ -1.87
CDKL1Q00532 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.34□□□□□ -1.87
CDKL1Q00532 AC116618.1-201ENST00000634617 774 ntBASIC3.34□□□□□ -1.87
CDKL1Q00532 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CDKL1Q00532 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CDKL1Q00532 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.34□□□□□ -1.87
CDKL1Q00532 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
CDKL1Q00532 AC099786.3-201ENST00000565735 1410 ntBASIC3.34□□□□□ -1.88
CDKL1Q00532 AP002907.1-201ENST00000606361 1430 ntBASIC3.34□□□□□ -1.88
CDKL1Q00532 CDR1-202ENST00000625883 1485 ntBASIC3.34□□□□□ -1.88
CDKL1Q00532 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CDKL1Q00532 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.34□□□□□ -1.88
CDKL1Q00532 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.33□□□□□ -1.88
CDKL1Q00532 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.33□□□□□ -1.88
CDKL1Q00532 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.33□□□□□ -1.88
CDKL1Q00532 AL049781.1-201ENST00000623195 3585 ntBASIC3.33□□□□□ -1.88
CDKL1Q00532 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms