Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC1.62□□□□□ -2.15
PRKDCP78527 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC1.62□□□□□ -2.15
PRKDCP78527 AC010546.1-201ENST00000569391 485 ntBASIC1.62□□□□□ -2.15
PRKDCP78527 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC1.62□□□□□ -2.15
PRKDCP78527 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC1.62□□□□□ -2.15
PRKDCP78527 AC022709.1-201ENST00000615967 87 ntBASIC1.62□□□□□ -2.15
PRKDCP78527 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
PRKDCP78527 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
PRKDCP78527 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC1.62□□□□□ -2.15
PRKDCP78527 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC1.62□□□□□ -2.15
PRKDCP78527 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
PRKDCP78527 SNORA68.2-201ENST00000391263 128 ntBASIC1.62□□□□□ -2.15
PRKDCP78527 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
PRKDCP78527 RPS15AP6-201ENST00000420703 385 ntBASIC1.62□□□□□ -2.15
PRKDCP78527 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC1.62□□□□□ -2.15
PRKDCP78527 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC1.62□□□□□ -2.15
PRKDCP78527 AC011492.1-201ENST00000600023 315 ntBASIC1.62□□□□□ -2.15
PRKDCP78527 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC1.62□□□□□ -2.15
PRKDCP78527 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
PRKDCP78527 THUMPD3P1-201ENST00000506556 1480 ntBASIC1.62□□□□□ -2.15
PRKDCP78527 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
PRKDCP78527 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
PRKDCP78527 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
PRKDCP78527 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC1.62□□□□□ -2.15
PRKDCP78527 ANKRD18EP-201ENST00000405487 2632 ntBASIC1.62□□□□□ -2.15
PRKDCP78527 Y_RNA.354-201ENST00000365448 111 ntBASIC1.62□□□□□ -2.15
PRKDCP78527 CUBN-201ENST00000377823 705 ntTSL 3 BASIC1.62□□□□□ -2.15
PRKDCP78527 RNU2-68P-201ENST00000410878 191 ntBASIC1.62□□□□□ -2.15
PRKDCP78527 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC1.62□□□□□ -2.15
PRKDCP78527 AL606490.7-201ENST00000433136 191 ntBASIC1.62□□□□□ -2.15
PRKDCP78527 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC1.62□□□□□ -2.15
PRKDCP78527 COX6CP2-201ENST00000444980 225 ntBASIC1.62□□□□□ -2.15
PRKDCP78527 AC104389.3-201ENST00000445629 235 ntBASIC1.62□□□□□ -2.15
PRKDCP78527 TXNP6-201ENST00000510190 310 ntBASIC1.62□□□□□ -2.15
PRKDCP78527 RNA5SP200-201ENST00000516360 103 ntBASIC1.62□□□□□ -2.15
PRKDCP78527 RNU4ATAC15P-201ENST00000516415 126 ntBASIC1.62□□□□□ -2.15
PRKDCP78527 AC005296.1-201ENST00000616145 209 ntBASIC1.62□□□□□ -2.15
PRKDCP78527 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC1.61□□□□□ -2.15
PRKDCP78527 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
PRKDCP78527 AC026523.2-201ENST00000625039 7739 ntBASIC1.61□□□□□ -2.15
PRKDCP78527 RNA5SP190-201ENST00000365222 118 ntBASIC1.61□□□□□ -2.15
PRKDCP78527 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
PRKDCP78527 AL355379.1-201ENST00000405542 640 ntBASIC1.61□□□□□ -2.15
PRKDCP78527 RNA5SP274-201ENST00000410484 108 ntBASIC1.61□□□□□ -2.15
PRKDCP78527 AC009237.2-201ENST00000421358 284 ntBASIC1.61□□□□□ -2.15
PRKDCP78527 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC1.61□□□□□ -2.15
PRKDCP78527 CCNHP1-201ENST00000513311 678 ntBASIC1.61□□□□□ -2.15
PRKDCP78527 EXOC5P1-201ENST00000510543 1969 ntBASIC1.61□□□□□ -2.15
PRKDCP78527 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
PRKDCP78527 AC010680.1-201ENST00000590024 3590 ntBASIC1.61□□□□□ -2.15
PRKDCP78527 Y_RNA.178-201ENST00000363832 102 ntBASIC1.61□□□□□ -2.15
PRKDCP78527 RNY1-201ENST00000364228 113 ntBASIC1.61□□□□□ -2.15
PRKDCP78527 RNU6-707P-201ENST00000364647 95 ntBASIC1.61□□□□□ -2.15
PRKDCP78527 AC013410.1-201ENST00000436223 1232 ntBASIC1.61□□□□□ -2.15
PRKDCP78527 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC1.61□□□□□ -2.15
PRKDCP78527 SNORD13-201ENST00000459299 104 ntBASIC1.61□□□□□ -2.15
PRKDCP78527 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC1.61□□□□□ -2.15
PRKDCP78527 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC1.61□□□□□ -2.15
PRKDCP78527 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.61□□□□□ -2.15
PRKDCP78527 MIR6895-201ENST00000613497 78 ntBASIC1.61□□□□□ -2.15
PRKDCP78527 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
PRKDCP78527 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.61□□□□□ -2.15
PRKDCP78527 MTCO1P7-201ENST00000419523 1542 ntBASIC1.61□□□□□ -2.15
PRKDCP78527 AL512430.2-201ENST00000406786 339 ntBASIC1.61□□□□□ -2.15
PRKDCP78527 AMD1P2-201ENST00000412936 992 ntBASIC1.61□□□□□ -2.15
PRKDCP78527 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC1.61□□□□□ -2.15
PRKDCP78527 AL163540.1-201ENST00000485382 386 ntBASIC1.61□□□□□ -2.15
PRKDCP78527 RN7SKP43-201ENST00000516173 320 ntBASIC1.61□□□□□ -2.15
PRKDCP78527 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC1.61□□□□□ -2.15
PRKDCP78527 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.61□□□□□ -2.15
PRKDCP78527 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC1.61□□□□□ -2.15
PRKDCP78527 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC1.61□□□□□ -2.15
PRKDCP78527 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC1.61□□□□□ -2.15
PRKDCP78527 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.61□□□□□ -2.15
PRKDCP78527 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
PRKDCP78527 AP005901.5-201ENST00000545779 1796 ntBASIC1.61□□□□□ -2.15
PRKDCP78527 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC1.6□□□□□ -2.15
PRKDCP78527 MTND5P23-201ENST00000430812 1655 ntBASIC1.6□□□□□ -2.15
PRKDCP78527 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
PRKDCP78527 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
PRKDCP78527 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC1.6□□□□□ -2.15
PRKDCP78527 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
PRKDCP78527 MIR96-201ENST00000362288 78 ntBASIC1.6□□□□□ -2.15
PRKDCP78527 RNU1-100P-201ENST00000365255 165 ntBASIC1.6□□□□□ -2.15
PRKDCP78527 RPS20P25-201ENST00000412447 352 ntBASIC1.6□□□□□ -2.15
PRKDCP78527 RPL23AP74-201ENST00000437246 471 ntBASIC1.6□□□□□ -2.15
PRKDCP78527 AC092185.1-201ENST00000491371 97 ntBASIC1.6□□□□□ -2.15
PRKDCP78527 RPL38P4-201ENST00000502376 214 ntBASIC1.6□□□□□ -2.15
PRKDCP78527 AC104090.1-201ENST00000506341 1171 ntBASIC1.6□□□□□ -2.15
PRKDCP78527 GOLGA5P1-201ENST00000507317 980 ntBASIC1.6□□□□□ -2.15
PRKDCP78527 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.6□□□□□ -2.15
PRKDCP78527 RNU6-356P-201ENST00000384140 107 ntBASIC1.6□□□□□ -2.15
PRKDCP78527 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
PRKDCP78527 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.6□□□□□ -2.15
PRKDCP78527 TRIM60P8Y-201ENST00000436338 762 ntBASIC1.6□□□□□ -2.15
PRKDCP78527 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC1.6□□□□□ -2.15
PRKDCP78527 GAPDHP27-201ENST00000447427 1020 ntBASIC1.6□□□□□ -2.15
PRKDCP78527 AC147055.1-201ENST00000509261 750 ntBASIC1.6□□□□□ -2.15
PRKDCP78527 SNORA9.3-201ENST00000516383 129 ntBASIC1.6□□□□□ -2.15
PRKDCP78527 IGLV3-17-201ENST00000519099 244 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms